BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,623,539	T→C	G47G (GGT→GGC)	yhhH →	putative NTF2 fold immunity protein for polymorphic toxin RhsB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,623,539	0	T	C	100.0%	669.0 / NA	165	G47G (GGT→GGC)	yhhH	putative NTF2 fold immunity protein for polymorphic toxin RhsB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (84/81); total (84/81)

Only 100 of 165 total aligned reads displayed.

CCTAATGTCTGCAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGTAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAA  >  NC_000913/3623395‑3623686

ccTAATGTCTGCAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAatat                                                                                                                                               >  1:657739/1‑151 (MQ=255)

ccTAATGTCTGCAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAatat                                                                                                                                               <  1:799394/151‑1 (MQ=255)

   aaTGTCTGCAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATAAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATAcc                                                                                                                                            <  2:757037/151‑1 (MQ=255)

    aTGTCTGCAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCg                                                                                                                                           >  1:1073964/1‑151 (MQ=255)

    aTGTCTGCAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCg                                                                                                                                           <  1:29613/151‑1 (MQ=255)

        cTGCAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGtt                                                                                                                                         >  1:1590904/1‑149 (MQ=255)

           cAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGaa                                                                                                                                     >  1:1909825/1‑150 (MQ=255)

            agagTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAAt                                                                                                                                   >  2:1584166/1‑151 (MQ=255)

               gTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTg                                                                                                                                <  1:958727/151‑1 (MQ=255)

               gTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTg                                                                                                                                >  1:2017307/1‑151 (MQ=255)

                  cATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGtt                                                                                                                             >  2:122774/1‑151 (MQ=255)

                  cATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGt                                                                                                                              <  1:1864225/150‑1 (MQ=255)

                   aTGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGtt                                                                                                                             >  2:1115234/1‑150 (MQ=255)

                      gTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTaaaa                                                                                                                         <  1:1387317/151‑1 (MQ=255)

                      gTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTaaa                                                                                                                          >  2:1562014/1‑150 (MQ=255)

                       tAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTaaaa                                                                                                                         >  1:1200849/1‑150 (MQ=255)

                       tAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTaaaa                                                                                                                         >  1:2084550/1‑150 (MQ=255)

                        aaTATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAAt                                                                                                                       >  1:1509219/1‑151 (MQ=255)

                        aaTATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAAt                                                                                                                       <  1:931821/151‑1 (MQ=255)

                           atGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATaaa                                                                                                                    <  2:1390874/151‑1 (MQ=255)

                                aaaaaaTATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCtat                                                                                                               <  2:1242096/151‑1 (MQ=255)

                                aaaaaaTATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCtat                                                                                                               >  1:1961285/1‑151 (MQ=255)

                                 aaaaaTATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCtata                                                                                                              <  2:251808/151‑1 (MQ=255)

                                  aaaaTATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCtat                                                                                                               >  2:2123756/1‑149 (MQ=255)

                                  aaaaTATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCtat                                                                                                               >  1:1218966/1‑149 (MQ=255)

                                   aaaTATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGc                                                                                                            >  1:879822/1‑151 (MQ=255)

                                   aaaTATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGc                                                                                                            >  2:1632462/1‑151 (MQ=255)

                                    aaTATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGc                                                                                                            >  1:1442578/1‑150 (MQ=255)

                                    aaTATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCa                                                                                                           <  1:190216/151‑1 (MQ=255)

                                      tatTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCAtt                                                                                                         >  2:1823493/1‑151 (MQ=255)

                                       atTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTg                                                                                                        <  2:81/151‑1 (MQ=255)

                                          gTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGaa                                                                                                     <  2:1038937/151‑1 (MQ=255)

                                            ttAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAAtt                                                                                                   >  2:1228423/1‑151 (MQ=255)

                                            ttAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAAtt                                                                                                   >  1:200/1‑151 (MQ=255)

                                            ttAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAAt                                                                                                    <  2:1846143/150‑1 (MQ=255)

                                             tAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAAtt                                                                                                   <  2:1961220/150‑1 (MQ=255)

                                              aGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAAtt                                                                                                   >  1:1775788/1‑149 (MQ=255)

                                               ggAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGc                                                                                                >  2:1568568/1‑151 (MQ=255)

                                                gAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCt                                                                                               >  2:1800789/1‑151 (MQ=255)

                                                  aCTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTga                                                                                             <  2:1097153/151‑1 (MQ=255)

                                                  aCTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTg                                                                                              >  1:1401426/1‑150 (MQ=255)

                                                    tgtgTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTg                                                                                              >  1:1117562/1‑148 (MQ=255)

                                                     gtgtCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGat                                                                                          <  2:962500/151‑1 (MQ=255)

                                                     gtgtCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGat                                                                                          <  2:694038/151‑1 (MQ=255)

                                                        tCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGatat                                                                                        >  1:1333616/1‑150 (MQ=255)

                                                        tCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGatat                                                                                        >  1:2116568/1‑150 (MQ=255)

                                                         cATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGatata                                                                                       <  1:873415/150‑1 (MQ=255)

                                                          aTTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATg                                                                                     >  2:76623/1‑151 (MQ=255)

                                                          aTTGTATCTTTGTTTGTCTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGatatat                                                                                      <  2:406752/150‑1 (MQ=255)

                                                               aTCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTa                                                                                  >  1:74435/1‑149 (MQ=255)

                                                                 cTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGa                                                                               >  2:5529/1‑150 (MQ=255)

                                                                  tttgtttgTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAAt                                                                             >  1:42721/1‑151 (MQ=255)

                                                                    tgtttgttTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATc                                                                            <  1:1417621/150‑1 (MQ=255)

                                                                    tgtttgttTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCg                                                                           >  1:2005027/1‑151 (MQ=255)

                                                                     gtttgtttTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCg                                                                           <  1:343059/150‑1 (MQ=255)

                                                                       ttgtttTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGtt                                                                         <  1:549231/150‑1 (MQ=255)

                                                                       ttgtttTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGtt                                                                         <  2:514311/150‑1 (MQ=255)

                                                                         gtttTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATg                                                                      >  2:936127/1‑151 (MQ=255)

                                                                           ttttACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATgg                                                                     >  1:1585174/1‑150 (MQ=255)

                                                                           ttttACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATgg                                                                     >  2:199474/1‑150 (MQ=255)

                                                                            tttACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGa                                                                    <  2:1909790/150‑1 (MQ=255)

                                                                            tttACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGa                                                                    <  1:469364/150‑1 (MQ=255)

                                                                            tttACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGa                                                                    <  2:104831/150‑1 (MQ=255)

                                                                            tttACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGAc                                                                   >  1:1780885/1‑151 (MQ=255)

                                                                            tttACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGAc                                                                   >  2:462898/1‑151 (MQ=255)

                                                                            tttACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGAc                                                                   >  2:1962799/1‑151 (MQ=255)

                                                                              tacatacaACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGAc                                                                   >  2:399439/1‑149 (MQ=255)

                                                                              tacatacaACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACa                                                                  <  2:1440701/150‑1 (MQ=255)

                                                                                    caacaCATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGcc                                                           <  2:131795/151‑1 (MQ=255)

                                                                                         caTGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCaga                                                      <  1:40034/151‑1 (MQ=255)

                                                                                              gcgcAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCagaaga                                                   >  2:1725960/1‑149 (MQ=255)

                                                                                               cgcAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCagaagaaga                                                <  1:2157481/151‑1 (MQ=255)

                                                                                                gcAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCagaagaaga                                                >  1:1471893/1‑150 (MQ=255)

                                                                                                gcAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAgaagaagaa                                               <  1:1381693/151‑1 (MQ=255)

                                                                                                  aGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGaaaa                                             <  2:530119/151‑1 (MQ=255)

                                                                                                  aGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGaaa                                              >  2:1256046/1‑150 (MQ=255)

                                                                                                     gtAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAAcc                                          >  2:1130326/1‑151 (MQ=255)

                                                                                                     gtAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAAc                                           <  1:1862705/150‑1 (MQ=255)

                                                                                                     gtAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAAc                                           <  2:280937/150‑1 (MQ=255)

                                                                                                        ataataataTTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCAt                                        >  1:449389/1‑150 (MQ=255)

                                                                                                          aataataTTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACg                                     >  1:1927405/1‑151 (MQ=255)

                                                                                                           ataataTTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACg                                     >  1:535705/1‑150 (MQ=255)

                                                                                                            taataTTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGa                                    >  2:989294/1‑150 (MQ=255)

                                                                                                             aataTTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGaaa                                  <  1:1268715/151‑1 (MQ=255)

                                                                                                              atatTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAAt                                 <  1:1483702/151‑1 (MQ=255)

                                                                                                               tatTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATc                                >  1:1037956/1‑151 (MQ=255)

                                                                                                                atTAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCa                               <  1:666769/151‑1 (MQ=255)

                                                                                                                  tAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACt                             >  1:276507/1‑151 (MQ=255)

                                                                                                                  tAAAATAATGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACt                             >  1:374207/1‑151 (MQ=255)

                                                                                                                       taatGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGtt                        >  2:67523/1‑151 (MQ=255)

                                                                                                                         atGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTATAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGtt                        >  2:367302/1‑149 (MQ=255)

                                                                                                                         atGCGCAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTaa                      <  2:221766/151‑1 (MQ=255)

                                                                                                                           gcgcAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTaaca                    <  2:751730/151‑1 (MQ=255)

                                                                                                                           gcgcAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTaaca                    <  1:1815098/151‑1 (MQ=255)

                                                                                                                           gcgcAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTaac                     <  2:2083794/150‑1 (MQ=255)

                                                                                                                              cAAGTATGAAAGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAacaaca                 <  1:1066448/151‑1 (MQ=255)

                                                                                                                                       aaGTGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGgtt        >  2:335207/1‑151 (MQ=255)

                                                                                                                                          tGAAGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGgttgtt     >  1:1562935/1‑151 (MQ=255)

                                                                                                                                            aaGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGa   <  2:334316/151‑1 (MQ=255)

                                                                                                                                             aGGCAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGa   >  2:1656825/1‑150 (MQ=255)

CCTAATGTCTGCAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGTAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAA  >  NC_000913/3623395‑3623686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`