Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 276,808 T→C C32R (TGT→CGT)  mmuM → CP4‑6 prophage; S‑methylmethionine:homocysteine methyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913276,8080TC100.0% 453.0 / NA 122C32R (TGT→CGT) mmuMCP4‑6 prophage; S‑methylmethionine:homocysteine methyltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (63/59);  total (63/59)

Only 100 of 122 total aligned reads displayed.

GCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGC  >  NC_000913/276661‑276955
                                                                                                                                                   |                                                                                                                                                   
gCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTa                                                                                                                                                  <  2:1025004/151‑1 (MQ=255)
      gTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACtt                                                                                                                                              >  1:1464038/1‑149 (MQ=255)
      gTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAg                                                                                                                                            <  2:854683/151‑1 (MQ=255)
       tGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGc                                                                                                                                           >  1:1538919/1‑151 (MQ=255)
         cTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCg                                                                                                                                         >  2:419165/1‑151 (MQ=255)
          ttATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCg                                                                                                                                         >  2:2095352/1‑150 (MQ=255)
            aTTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGAc                                                                                                                                       >  2:1963236/1‑150 (MQ=255)
            aTTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACa                                                                                                                                      <  1:518764/151‑1 (MQ=255)
             tttCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGAc                                                                                                                                       >  2:1776745/1‑149 (MQ=255)
              ttCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAg                                                                                                                                     <  2:1990887/150‑1 (MQ=255)
                   tACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCtg                                                                                                                                 <  1:1803901/149‑1 (MQ=255)
                    aCTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCtgtg                                                                                                                               <  1:115670/150‑1 (MQ=255)
                    aCTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCtg                                                                                                                                 <  2:1237761/148‑1 (MQ=255)
                       cAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTc                                                                                                                            <  2:706134/150‑1 (MQ=255)
                       cAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTc                                                                                                                            >  1:1330592/1‑150 (MQ=255)
                       cAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCa                                                                                                                           <  1:2058599/151‑1 (MQ=255)
                        aaCCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAg                                                                                                                          <  1:1192775/151‑1 (MQ=255)
                            ccGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCa                                                                                                                       >  2:1994495/1‑150 (MQ=255)
                                aaCGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTg                                                                                                                  >  2:2062631/1‑151 (MQ=255)
                                  cGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCt                                                                                                                >  1:1537316/1‑151 (MQ=255)
                                   gCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTg                                                                                                               >  2:2171522/1‑151 (MQ=255)
                                     aaaaCAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGt                                                                                                             >  1:1419796/1‑151 (MQ=255)
                                      aaaCAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGt                                                                                                             >  1:1123914/1‑150 (MQ=255)
                                      aaaCAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTa                                                                                                            <  1:856272/151‑1 (MQ=255)
                                          aGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGaa                                                                                                         >  2:574107/1‑150 (MQ=255)
                                          aGGAGCCAGAACATATCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGaa                                                                                                         >  1:1386932/1‑150 (MQ=255)
                                            gAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAAc                                                                                                      <  1:1649143/151‑1 (MQ=255)
                                            gAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAAc                                                                                                      >  1:901568/1‑151 (MQ=255)
                                               ccAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCg                                                                                                   >  1:1494488/1‑151 (MQ=255)
                                                cAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCgg                                                                                                  <  1:998289/151‑1 (MQ=255)
                                                cAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCgg                                                                                                  >  1:589515/1‑151 (MQ=255)
                                                   aaCATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGc                                                                                               <  2:1911323/151‑1 (MQ=255)
                                                      aTGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGTAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTa                                                                                            <  1:926006/151‑1 (MQ=255)
                                                       tGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTAt                                                                                           >  1:1233248/1‑151 (MQ=255)
                                                        gTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATc                                                                                          >  2:687930/1‑151 (MQ=255)
                                                          cGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATcc                                                                                         <  2:89771/150‑1 (MQ=255)
                                                          cGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCcg                                                                                        <  1:1592815/151‑1 (MQ=255)
                                                           gCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCcgc                                                                                       >  1:150961/1‑151 (MQ=255)
                                                             aGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCcgcg                                                                                      >  2:126359/1‑150 (MQ=255)
                                                             aGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCcgcg                                                                                      >  2:2164387/1‑150 (MQ=255)
                                                               aataatCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGa                                                                                     >  1:231276/1‑149 (MQ=255)
                                                                 taatCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTg                                                                                 >  2:249254/1‑151 (MQ=255)
                                                                  aatCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTg                                                                                 <  1:1136501/150‑1 (MQ=255)
                                                                      cGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCt                                                                            >  1:1916894/1‑151 (MQ=255)
                                                                       gTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCtt                                                                           <  1:730514/151‑1 (MQ=255)
                                                                        ttACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTg                                                                          >  1:1895957/1‑151 (MQ=255)
                                                                         tACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTg                                                                          <  1:672190/150‑1 (MQ=255)
                                                                         tACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTg                                                                          >  2:740186/1‑150 (MQ=255)
                                                                         tACGCGCTCTTCTTAATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTg                                                                          <  2:1107434/150‑1 (MQ=255)
                                                                           cgcgCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGAtt                                                                       >  2:819362/1‑151 (MQ=255)
                                                                            gcgcTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATta                                                                      <  1:645426/151‑1 (MQ=255)
                                                                                 cttcttGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATtacta                                                                   <  2:2073007/149‑1 (MQ=255)
                                                                                 cttcttGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTAcc                                                                 >  2:2077002/1‑151 (MQ=255)
                                                                                 cttcttGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTAcc                                                                 >  1:327671/1‑151 (MQ=255)
                                                                                  ttcttGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACcg                                                                >  1:2056809/1‑151 (MQ=255)
                                                                                   tcttGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATtactac                                                                  <  2:1183878/148‑1 (MQ=255)
                                                                                   tcttGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATtactac                                                                  <  2:733186/148‑1 (MQ=255)
                                                                                      tGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACcgggcg                                                            >  2:575215/1‑151 (MQ=255)
                                                                                      tGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACcgg                                                               <  2:589508/148‑1 (MQ=255)
                                                                                       gATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACcgggcgg                                                           <  2:750887/151‑1 (MQ=255)
                                                                                        aTAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACcgggcggg                                                          <  1:12881/151‑1 (MQ=255)
                                                                                        aTAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACcgggcggg                                                          >  1:549639/1‑151 (MQ=255)
                                                                                         tAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCgggg                                                         >  2:605988/1‑151 (MQ=255)
                                                                                          aaaCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCgggg                                                         <  1:596722/150‑1 (MQ=255)
                                                                                           aaCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGgc                                                       <  2:2026282/151‑1 (MQ=255)
                                                                                            aCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGgcg                                                      <  1:1400320/151‑1 (MQ=255)
                                                                                            aCAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGgcg                                                      >  1:35152/1‑151 (MQ=255)
                                                                                              aGGATATCCTGCTGCTGGATGGCGCGATGGCGAAGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGCGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGAGCGGGGgcgc                                                     >  2:849458/1‑150 (MQ=255)
                                                                                                gATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAAt                                                  >  2:1924628/1‑151 (MQ=255)
                                                                                                 atatCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATg                                                 <  2:662250/151‑1 (MQ=255)
                                                                                                 atatCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATg                                                 <  1:259988/151‑1 (MQ=255)
                                                                                                   atCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATgc                                                <  2:552603/150‑1 (MQ=255)
                                                                                                      ctgctgctgGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGcgcg                                             >  2:1909704/1‑150 (MQ=255)
                                                                                                       tgctgctgGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGAt                                           >  2:1898213/1‑151 (MQ=255)
                                                                                                        gctgctgGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATc                                          <  1:1582930/151‑1 (MQ=255)
                                                                                                              ggATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGcc                                    >  1:161059/1‑151 (MQ=255)
                                                                                                                aTGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCa                                   <  2:276639/150‑1 (MQ=255)
                                                                                                                 tGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGc                                 >  1:420400/1‑151 (MQ=255)
                                                                                                                  ggCGCGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGc                                 <  2:1542317/150‑1 (MQ=255)
                                                                                                                   gcgcGATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTa                               <  2:1018006/151‑1 (MQ=255)
                                                                                                                     gcgATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATc                             >  2:1042269/1‑151 (MQ=255)
                                                                                                                       gATGGCGACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAg                           <  1:498466/151‑1 (MQ=255)
                                                                                                                             gACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACg                     >  1:642807/1‑151 (MQ=255)
                                                                                                                             gACGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACg                     >  2:1320537/1‑151 (MQ=255)
                                                                                                                              aCGGAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGc                    <  1:878540/151‑1 (MQ=255)
                                                                                                                                ggAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCcg                  >  2:199170/1‑151 (MQ=255)
                                                                                                                                 gAGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCcgg                 <  2:1272779/151‑1 (MQ=255)
                                                                                                                                  aGCTGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCcggc                <  1:781686/151‑1 (MQ=255)
                                                                                                                                     tGGAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCggg             >  2:1476016/1‑151 (MQ=255)
                                                                                                                                      ggAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCggg             <  1:1907238/150‑1 (MQ=255)
                                                                                                                                      ggAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGc            >  2:639690/1‑151 (MQ=255)
                                                                                                                                       gAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGc            >  1:920083/1‑150 (MQ=255)
                                                                                                                                       gAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCt           <  1:165094/151‑1 (MQ=255)
                                                                                                                                       gAAGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCt           <  1:322914/151‑1 (MQ=255)
                                                                                                                                        aaGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCtt          <  2:428946/151‑1 (MQ=255)
                                                                                                                                         aGCGCGAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCtt          >  2:193432/1‑150 (MQ=255)
                                                                                                                                            gcgAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTcgcc      >  1:1547056/1‑151 (MQ=255)
                                                                                                                                              gAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTcgccgc    <  1:950182/151‑1 (MQ=255)
                                                                                                                                              gAGGGCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTcgccg     >  2:155349/1‑150 (MQ=255)
                                                                                                                                                gggCGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCcgcgc  <  1:1493809/151‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGC  >  NC_000913/276661‑276955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑