Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 562,582 A→G T83A (ACT→GCT)  sfmH → FimA homolog, function unknown

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913562,5820AG100.0% 583.8 / NA 146T83A (ACT→GCT) sfmHFimA homolog, function unknown
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (64/82);  total (64/82)

Only 100 of 146 total aligned reads displayed.

ATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAACTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCG  >  NC_000913/562435‑562729
                                                                                                                                                   |                                                                                                                                                   
atCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCt                                                                                                                                                   >  1:1696464/1‑150 (MQ=255)
   tttAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCg                                                                                                                                               >  2:378643/1‑151 (MQ=255)
    ttAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCg                                                                                                                                               >  2:356488/1‑150 (MQ=255)
     tAATAGCACCAATACCCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGAt                                                                                                                                             >  1:317198/1‑151 (MQ=255)
     tAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGa                                                                                                                                              <  2:1199179/150‑1 (MQ=255)
       aTAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATa                                                                                                                                            >  1:1793616/1‑150 (MQ=255)
         aGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAAtt                                                                                                                                         >  2:1528278/1‑151 (MQ=255)
         aGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAAtt                                                                                                                                         <  1:1320598/151‑1 (MQ=255)
          gCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAAtt                                                                                                                                         >  2:1010046/1‑150 (MQ=255)
          gCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATta                                                                                                                                        <  1:749798/151‑1 (MQ=255)
            aCCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATtat                                                                                                                                       >  2:830967/1‑150 (MQ=255)
              cAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATaa                                                                                                                                     >  2:1533945/1‑150 (MQ=255)
                  aaCCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAatata                                                                                                                                <  2:2043915/151‑1 (MQ=255)
                  aaCCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAatat                                                                                                                                 >  1:1068862/1‑150 (MQ=255)
                  aaCCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAatat                                                                                                                                 <  2:190062/150‑1 (MQ=255)
                    ccagccagGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATg                                                                                                                              >  1:764363/1‑151 (MQ=255)
                      agccagGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGc                                                                                                                             >  2:802761/1‑150 (MQ=255)
                       gccagGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCaa                                                                                                                           <  2:485146/151‑1 (MQ=255)
                        ccagGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAAt                                                                                                                          >  1:299063/1‑151 (MQ=255)
                        ccagGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAAt                                                                                                                          <  2:793235/151‑1 (MQ=255)
                          agGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAAtt                                                                                                                         >  2:1693619/1‑150 (MQ=255)
                             gCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACAt                                                                                                                     <  2:564072/151‑1 (MQ=255)
                              cAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATg                                                                                                                    <  1:1193825/151‑1 (MQ=255)
                                   tgttgtTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTAt                                                                                                               >  1:1350691/1‑151 (MQ=255)
                                         tttACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTAtt                                                                                                          <  2:328596/150‑1 (MQ=255)
                                           tACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAg                                                                                                        <  1:399473/150‑1 (MQ=255)
                                             ccGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGt                                                                                                      <  1:1217143/150‑1 (MQ=255)
                                             ccGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTg                                                                                                     >  1:296422/1‑151 (MQ=255)
                                             ccGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTg                                                                                                     >  2:1433676/1‑151 (MQ=255)
                                             ccGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTg                                                                                                     <  1:504993/151‑1 (MQ=255)
                                                gAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGa                                                                                                  <  2:1120941/151‑1 (MQ=255)
                                                  aaaaTCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATg                                                                                                <  1:14630/151‑1 (MQ=255)
                                                   aaaTCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGa                                                                                               <  1:1978166/151‑1 (MQ=255)
                                                     aTCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGt                                                                                             >  1:1758987/1‑151 (MQ=255)
                                                      tCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTc                                                                                            >  1:567950/1‑151 (MQ=255)
                                                       ccGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTc                                                                                            <  1:1918464/150‑1 (MQ=255)
                                                       ccGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCt                                                                                           <  1:1821089/151‑1 (MQ=255)
                                                        cGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTg                                                                                          >  2:914843/1‑151 (MQ=255)
                                                        cGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTg                                                                                          <  2:532017/151‑1 (MQ=255)
                                                         ggCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTgg                                                                                         <  2:907299/151‑1 (MQ=255)
                                                         ggCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTgg                                                                                         <  2:1761185/151‑1 (MQ=255)
                                                          gCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGt                                                                                        <  1:886200/151‑1 (MQ=255)
                                                             gggTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGtt                                                                                       <  1:608068/149‑1 (MQ=255)
                                                             gggTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTg                                                                                      <  2:147566/150‑1 (MQ=255)
                                                               gTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATa                                                                                   <  1:1327350/151‑1 (MQ=255)
                                                                tAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGAt                                                                                    >  1:720861/1‑149 (MQ=255)
                                                                 aGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAgt                                                                                 >  2:846744/1‑151 (MQ=255)
                                                                   gtgtCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAgtgt                                                                               >  1:1873504/1‑151 (MQ=255)
                                                                     gtCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGtgtg                                                                              >  1:1393280/1‑150 (MQ=255)
                                                                     gtCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGtgtg                                                                              >  1:702686/1‑150 (MQ=255)
                                                                          aGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGat                                                                        <  1:683384/151‑1 (MQ=255)
                                                                              aTTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTc                                                                    <  1:1281744/151‑1 (MQ=255)
                                                                                 tGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGt                                                                 >  1:1222950/1‑151 (MQ=255)
                                                                                 tGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGt                                                                 >  1:1613671/1‑151 (MQ=255)
                                                                                  gTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGt                                                                 <  1:118553/150‑1 (MQ=255)
                                                                                    ccACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTcc                                                              <  2:1665673/151‑1 (MQ=255)
                                                                                    ccACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTc                                                               <  2:1327762/150‑1 (MQ=255)
                                                                                      aCCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTcccc                                                            <  1:997066/151‑1 (MQ=255)
                                                                                        ccGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTcccccc                                                          <  2:1102294/151‑1 (MQ=255)
                                                                                         cGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCg                                                         >  1:653671/1‑151 (MQ=255)
                                                                                               gCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAAt                                                   <  1:1335584/151‑1 (MQ=255)
                                                                                               gCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAAt                                                   >  2:1667948/1‑151 (MQ=255)
                                                                                               gCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAAt                                                   >  2:1445437/1‑151 (MQ=255)
                                                                                                 tGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAAtt                                                  >  2:1184532/1‑150 (MQ=255)
                                                                                                  ggTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAAtt                                                  <  1:18762/149‑1 (MQ=255)
                                                                                                     gAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTatat                                              <  1:889765/150‑1 (MQ=255)
                                                                                                            acatacCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATg                                       <  2:962283/150‑1 (MQ=255)
                                                                                                            acatacCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATg                                       <  2:891415/150‑1 (MQ=255)
                                                                                                              atacCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATggg                                     >  1:1715142/1‑150 (MQ=255)
                                                                                                              atacCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGa                                    <  1:2167801/151‑1 (MQ=255)
                                                                                                                acCGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGaa                                   <  1:2111686/150‑1 (MQ=255)
                                                                                                                 ccGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAAc                                  >  1:1738222/1‑150 (MQ=255)
                                                                                                                  cGTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAg                                <  1:1957513/151‑1 (MQ=255)
                                                                                                                   gTAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGa                               <  2:407844/151‑1 (MQ=255)
                                                                                                                    tAGTTATGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAAc                                  >  2:469730/1‑147 (MQ=255)
                                                                                                                         aTGTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTaa                         <  2:1478778/151‑1 (MQ=255)
                                                                                                                           gTCACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAAc                        <  2:1959637/150‑1 (MQ=255)
                                                                                                                             cACCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGt                      <  1:378645/150‑1 (MQ=255)
                                                                                                                              aCCAACTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGttt                    >  1:1493362/1‑151 (MQ=255)
                                                                                                                                  aCTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGc                 >  1:1389363/1‑150 (MQ=255)
                                                                                                                                  aCTTTATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCa                <  1:2093086/151‑1 (MQ=255)
                                                                                                                                     ttATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCaaa              >  1:1828119/1‑150 (MQ=255)
                                                                                                                                     ttATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCaaa              <  2:1600163/150‑1 (MQ=255)
                                                                                                                                     ttATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCaa               <  1:734611/149‑1 (MQ=255)
                                                                                                                                     ttATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCaa               <  1:147633/149‑1 (MQ=255)
                                                                                                                                      tATTGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCaaaa             <  1:700247/150‑1 (MQ=255)
                                                                                                                                        ttGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCt          >  2:254206/1‑151 (MQ=255)
                                                                                                                                        ttGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCt          >  1:1361870/1‑151 (MQ=255)
                                                                                                                                         tGTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCt          <  2:1613643/150‑1 (MQ=255)
                                                                                                                                          gTTCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTc        <  1:1243894/151‑1 (MQ=255)
                                                                                                                                           ttCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTcc       >  2:1195728/1‑151 (MQ=255)
                                                                                                                                            tCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTcc       <  1:2002660/150‑1 (MQ=255)
                                                                                                                                            tCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTcc       >  1:1353025/1‑150 (MQ=255)
                                                                                                                                            tCAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTcc       <  2:1309602/150‑1 (MQ=255)
                                                                                                                                             cAGGAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCa      <  1:1303457/150‑1 (MQ=255)
                                                                                                                                               ggAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTc   >  2:1645335/1‑151 (MQ=255)
                                                                                                                                                gAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCg  >  1:1632599/1‑151 (MQ=255)
                                                                                                                                                gAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCg  <  2:502011/151‑1 (MQ=255)
                                                                                                                                                gAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCg  >  1:552798/1‑151 (MQ=255)
                                                                                                                                                gAAGCTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCg  <  1:1434947/151‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
ATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAACTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCG  >  NC_000913/562435‑562729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑