BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,274,435	A→G	T218A (ACA→GCA)	ychO →	putative invasin

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,274,435	0	A	G	100.0%	550.8 / NA	141	T218A (ACA→GCA)	ychO	putative invasin
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (89/52); total (89/52)

Only 100 of 142 total aligned reads displayed.

GCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGACAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGTACGGGTTAT  >  NC_000913/1274289‑1274581

gCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGc                                                                                                                                                <  2:567518/151‑1 (MQ=255)

gCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGc                                                                                                                                                >  1:1618097/1‑151 (MQ=255)

    ctggctggTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACg                                                                                                                                            >  2:519586/1‑151 (MQ=255)

     tggctggTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGc                                                                                                                                           >  1:89113/1‑151 (MQ=255)

     tggctggTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGc                                                                                                                                           >  1:623376/1‑151 (MQ=255)

     tggctggTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGc                                                                                                                                           >  1:131990/1‑151 (MQ=255)

      ggctggTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGc                                                                                                                                           >  1:690929/1‑150 (MQ=255)

         tggtggGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGTGCGAATATTTGCGATTATCCGCAAACTTTTATCAGACGTTTGCTGCATGGCATGAACAGGCAGCCACGCAg                                                                                                                                         >  2:1008979/1‑149 (MQ=255)

         tggtggGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAgg                                                                                                                                        >  1:1071855/1‑150 (MQ=255)

          ggtggGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGaa                                                                                                                                      <  2:1109265/151‑1 (MQ=255)

            tggGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGaac                                                                                                                                     >  2:2018641/1‑150 (MQ=255)

             gggTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGaaca                                                                                                                                    >  2:432962/1‑150 (MQ=255)

               gTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACg                                                                                                                                 >  1:1896983/1‑151 (MQ=255)

               gTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACg                                                                                                                                 <  2:1784593/151‑1 (MQ=255)

                ttATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACgg                                                                                                                                >  1:50150/1‑151 (MQ=255)

                 tataACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACgg                                                                                                                                <  2:673612/150‑1 (MQ=255)

                 tataACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACgg                                                                                                                                >  2:29135/1‑150 (MQ=255)

                  ataACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGAt                                                                                                                              >  1:54889/1‑151 (MQ=255)

                  ataACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGAt                                                                                                                              <  1:1206441/151‑1 (MQ=255)

                    aaCACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATgg                                                                                                                            >  1:1914473/1‑151 (MQ=255)

                     acacTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGgc                                                                                                                           >  2:2119890/1‑151 (MQ=255)

                      cacTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGgcg                                                                                                                          <  1:340105/151‑1 (MQ=255)

                       acTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGgcgc                                                                                                                         >  2:363663/1‑151 (MQ=255)

                        cTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGgcgcg                                                                                                                        >  1:573996/1‑151 (MQ=255)

                         tttttATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGgcgcgc                                                                                                                       >  2:1182218/1‑151 (MQ=255)

                         tttttATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGgcgcgc                                                                                                                       >  2:2097346/1‑151 (MQ=255)

                          ttttATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCGAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGcgcgcg                                                                                                                      >  2:455385/1‑151 (MQ=255)

                            ttATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCggg                                                                                                                    >  2:53838/1‑151 (MQ=255)

                             tATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGt                                                                                                                   >  1:535361/1‑151 (MQ=255)

                              aTGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGt                                                                                                                   >  2:1787738/1‑150 (MQ=255)

                              aTGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGt                                                                                                                   <  2:2149772/150‑1 (MQ=255)

                                gACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAGTATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACg                                                                                                                >  2:94293/1‑151 (MQ=255)

                                gACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACg                                                                                                                <  1:1423827/151‑1 (MQ=255)

                                 aCAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACg                                                                                                                >  2:1289844/1‑150 (MQ=255)

                                   aaCTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGAcc                                                                                                             >  1:1526987/1‑151 (MQ=255)

                                       tGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGAc                                                                                                         >  2:1301567/1‑151 (MQ=255)

                                         cTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGAc                                                                                                         >  1:1111164/1‑149 (MQ=255)

                                          tGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGc                                                                                                      >  2:334692/1‑151 (MQ=255)

                                                aaaaTCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGAt                                                                                                <  1:2043026/151‑1 (MQ=255)

                                                  aaTCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATgc                                                                                              <  1:844526/151‑1 (MQ=255)

                                                  aaTCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATgc                                                                                              <  1:905272/151‑1 (MQ=255)

                                                  aaTCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATgc                                                                                              >  2:500172/1‑151 (MQ=255)

                                                        cAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATg                                                                                         <  1:2106856/150‑1 (MQ=255)

                                                        cAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGc                                                                                        >  1:2125092/1‑151 (MQ=255)

                                                            gagcgGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGtt                                                                                    <  1:792490/151‑1 (MQ=255)

                                                             agcgGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTc                                                                                   >  1:283461/1‑151 (MQ=255)

                                                                  gCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATc                                                                               >  1:771985/1‑150 (MQ=255)

                                                                      tGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAacac                                                                          >  2:1954985/1‑151 (MQ=255)

                                                                          gCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTc                                                                       >  1:298714/1‑150 (MQ=255)

                                                                              aaGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATAc                                                                  >  2:627903/1‑151 (MQ=255)

                                                                              aaGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATAc                                                                  >  2:1200600/1‑151 (MQ=255)

                                                                               aGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATAcc                                                                 >  2:1639856/1‑151 (MQ=255)

                                                                                 cGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATAcc                                                                 >  2:1453932/1‑149 (MQ=255)

                                                                                  gTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAgt                                                              >  1:1364999/1‑151 (MQ=255)

                                                                                  gTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAgt                                                              >  2:1278534/1‑151 (MQ=255)

                                                                                     gggCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTc                                                           <  2:77336/151‑1 (MQ=255)

                                                                                      ggCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCa                                                          <  1:712566/151‑1 (MQ=255)

                                                                                       gCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTc                                                           >  1:1035371/1‑149 (MQ=255)

                                                                                        cGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGc                                                        >  1:177634/1‑151 (MQ=255)

                                                                                         gAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGcc                                                       <  2:236132/151‑1 (MQ=255)

                                                                                         gAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGcc                                                       >  1:541811/1‑151 (MQ=255)

                                                                                          aaTATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCt                                                      >  1:1085902/1‑151 (MQ=255)

                                                                                           atatTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCt                                                      >  1:1140784/1‑150 (MQ=255)

                                                                                           atatTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTa                                                     <  1:172849/151‑1 (MQ=255)

                                                                                             atTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCt                                                      >  1:1850955/1‑148 (MQ=255)

                                                                                              tttGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGa                                                   >  2:1934855/1‑150 (MQ=255)

                                                                                              tttGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGa                                                   >  1:1840786/1‑150 (MQ=255)

                                                                                              tttGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGa                                                   >  2:1138828/1‑150 (MQ=255)

                                                                                              tttGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGa                                                   >  1:1007596/1‑150 (MQ=255)

                                                                                                  cGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGt                                              >  1:1836666/1‑151 (MQ=255)

                                                                                                   gATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGt                                              >  1:2114210/1‑150 (MQ=255)

                                                                                                    aTTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTAt                                            <  1:1527138/151‑1 (MQ=255)

                                                                                                     ttATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTAtt                                           >  1:1378799/1‑151 (MQ=255)

                                                                                                       aTCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTAtttt                                         <  2:416771/151‑1 (MQ=255)

                                                                                                           gCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTg                                     <  1:325970/151‑1 (MQ=255)

                                                                                                           gCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTg                                     <  1:105712/151‑1 (MQ=255)

                                                                                                            cAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTg                                     >  2:1149625/1‑150 (MQ=255)

                                                                                                             aaaCTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACTCCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGAt                                   <  1:1619897/151‑1 (MQ=255)

                                                                                                              aaCTTTTATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATc                                  >  2:1350724/1‑151 (MQ=255)

                                                                                                                  tttATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCgtg                               <  2:298752/150‑1 (MQ=255)

                                                                                                                  tttATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCgtg                               <  2:1392256/150‑1 (MQ=255)

                                                                                                                   ttATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCgtgt                              <  1:11200/150‑1 (MQ=255)

                                                                                                                    tATCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGtt                             <  2:241345/150‑1 (MQ=255)

                                                                                                                      tCAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGa                           <  2:1930969/150‑1 (MQ=255)

                                                                                                                       cAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGAtt                         >  2:848648/1‑151 (MQ=255)

                                                                                                                       cAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGAtt                         <  2:275904/151‑1 (MQ=255)

                                                                                                                       cAGCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGAt                          <  1:1945337/150‑1 (MQ=255)

                                                                                                                         gCCGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTg                       >  2:2032727/1‑151 (MQ=255)

                                                                                                                          ccGTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGt                      >  2:926501/1‑151 (MQ=255)

                                                                                                                            gTTTGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGttt                    <  1:160366/151‑1 (MQ=255)

                                                                                                                              ttGCTGCATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTa                   <  1:1248669/150‑1 (MQ=255)

                                                                                                                                gctgcATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAAct                <  1:432140/151‑1 (MQ=255)

                                                                                                                                gctgcATGGCATGAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAAct                >  1:933920/1‑151 (MQ=255)

                                                                                                                                    catggcatgAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTgg            >  1:849131/1‑151 (MQ=255)

                                                                                                                                     atggcatgAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGt           >  1:664558/1‑151 (MQ=255)

                                                                                                                                       ggcatgAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGTa          <  1:1578405/150‑1 (MQ=255)

                                                                                                                                       ggcatgAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGTAc         <  1:1597175/151‑1 (MQ=255)

                                                                                                                                         catgAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGTACgg       <  1:1298287/151‑1 (MQ=255)

                                                                                                                                          atgAACAGGCAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGTACggg      >  2:2100317/1‑151 (MQ=255)

                                                                                                                                              acaggcagCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGTACGGGTTAt  >  2:641202/1‑151 (MQ=255)

GCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGACAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGTACGGGTTAT  >  NC_000913/1274289‑1274581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`