New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4181858 =7 (0.090)82 (1.090) 70/298 0.1 92.1% coding (614/4029 nt) rpoB RNA polymerase, beta subunit
?NC_000913 = 4181869 NA (NA)coding (625/4029 nt) rpoB RNA polymerase, beta subunit

TCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACG  >  NC_000913/4181719‑4182019
                                                                                                                                                      |                                                                                                                                                      
aaaacccactcttcgggtaaagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcactgcgaccatca                                                                                                                                                        >  2:430324‑M1/140‑151 (MQ=255)
   acccactcttcgggtaaagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTc                                                                                                                                                     <  2:186374‑M1/15‑1 (MQ=255)
   acccactcttcgggtaaagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTc                                                                                                                                                     >  2:1078998‑M1/137‑151 (MQ=255)
    cccactcttcgggtaaagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCt                                                                                                                                                    <  2:92447‑M1/16‑1 (MQ=255)
    cccactcttcgggtaaagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCt                                                                                                                                                    >  2:735583‑M1/136‑151 (MQ=255)
    cccactcttcgggtaaagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCt                                                                                                                                                    >  2:709723‑M1/136‑151 (MQ=255)
       actcttcgggtaaagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTgcg                                                                                                                                                 <  2:723176‑M1/19‑1 (MQ=255)
        ctcttcgggtaaagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTgcgc                                                                                                                                                <  2:989586‑M1/20‑1 (MQ=255)
          cttcgggtaaagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTgcgcgc                                                                                                                                              <  1:609177‑M1/22‑1 (MQ=255)
             cgggtaaagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCt                                                                                                                                           <  1:560158‑M1/25‑1 (MQ=255)
                   aagtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTa                                                                                                                                     >  1:822632‑M1/121‑151 (MQ=255)
                     gtgctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTac                                                                                                                                    <  2:1166979‑M1/32‑1 (MQ=255)
                       gctgtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTAcacc                                                                                                                                 <  1:510650‑M1/35‑1 (MQ=255)
                          gtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTAcaccac                                                                                                                               <  2:185670‑M1/37‑1 (MQ=255)
                          gtataacgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACcaca                                                                                                                              >  2:756904‑M1/114‑151 (MQ=255)
                                cgcgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGc                                                                                                                          <  2:100228‑M1/42‑1 (MQ=255)
                                  cgcgtatcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGAt                                                                                                                      >  1:937834‑M1/106‑151 (MQ=255)
                                       atcatcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCg                                                                                                                 <  2:602419‑M1/51‑1 (MQ=255)
                                         catcccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGAc                                                                                                               <  1:441478‑M1/53‑1 (MQ=255)
                                            cccttaccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTg                                                                                                            >  1:331523‑M1/96‑151 (MQ=255)
                                                taccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCt                                                                                                        <  1:831995‑M1/60‑1 (MQ=255)
                                                taccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCCGtt                                                                                                          >  2:76751‑M1/92‑149 (MQ=255)
                                                 accgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCt                                                                                                        >  2:118516‑M1/91‑150 (MQ=255)
                                                  ccgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCtt                                                                                                       >  1:886029‑M1/90‑150 (MQ=255)
                                                   cgtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTg                                                                                                     >  2:1027955‑M1/89‑151 (MQ=255)
                                                    gtggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTg                                                                                                     <  1:378764‑M1/63‑1 (MQ=255)
                                                         tcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGaaaa                                                                                                 <  2:823011‑M1/67‑1 (MQ=255)
                                                            tggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgtgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGtt                                                                                             <  2:726532‑M1/71‑1 (MQ=255)
                                                            tggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGtt                                                                                             <  2:1052312‑M1/71‑1 (MQ=255)
                                                             ggctggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTAt                                                                                           <  2:1081209‑M1/73‑1 (MQ=255)
                                                                 ggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCttt                                                                                       >  1:1028769‑M1/75‑151 (MQ=255)
                                                                 ggacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCt                                                                                         >  2:1114808‑M1/75‑149 (MQ=255)
                                                                  gacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTg                                                                                      >  1:108453‑M1/74‑151 (MQ=255)
                                                                  gacttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTg                                                                                      >  2:897377‑M1/74‑151 (MQ=255)
                                                                   acttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGa                                                                                     >  2:10240‑M1/73‑151 (MQ=255)
                                                                    cttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGa                                                                                     >  2:643674‑M1/72‑150 (MQ=255)
                                                                    cttcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGa                                                                                     <  1:1145036‑M1/79‑1 (MQ=255)
                                                                      tcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGaa                                                                                    >  2:567293‑M1/70‑149 (MQ=255)
                                                                      tcgaattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGaa                                                                                    >  2:328090‑M1/70‑149 (MQ=255)
                                                                         aattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCg                                                                               <  1:150632‑M1/85‑1 (MQ=255)
                                                                         aattcgatccgaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCg                                                                               <  2:814569‑M1/85‑1 (MQ=255)
                                                                                   gaaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACa                                                                       <  2:713183‑M1/93‑1 (MQ=255)
                                                                                    aaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGc                                                                    >  1:1106199‑M1/56‑151 (MQ=255)
                                                                                    aaggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGc                                                                    <  1:1042581‑M1/96‑1 (MQ=255)
                                                                                     aggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCt                                                                   <  1:502355‑M1/97‑1 (MQ=255)
                                                                                      ggacaacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTg                                                                  >  2:80077‑M1/54‑151 (MQ=255)
                                                                                         caacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAg                                                               >  2:671315‑M1/51‑151 (MQ=255)
                                                                                         caacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAg                                                               >  2:426365‑M1/51‑151 (MQ=255)
                                                                                          aacctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGc                                                                 <  2:789997‑M1/99‑1 (MQ=255)
                                                                                            cctgttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATg                                                            >  1:265521‑M1/48‑151 (MQ=255)
                                                                                               gttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGaa                                                         >  2:354540‑M1/45‑151 (MQ=255)
                                                                                               gttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGaa                                                         >  1:703414‑M1/45‑151 (MQ=255)
                                                                                                ttcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAAc                                                        <  2:984690‑M1/108‑1 (MQ=255)
                                                                                                 tcgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAAc                                                        >  2:734306‑M1/43‑150 (MQ=255)
                                                                                                  cgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACt                                                       >  2:886193‑M1/42‑150 (MQ=255)
                                                                                                  cgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACt                                                       >  1:185664‑M1/42‑150 (MQ=255)
                                                                                                  cgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTg                                                      >  1:550438‑M1/42‑151 (MQ=255)
                                                                                                  cgtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTg                                                      >  2:517371‑M1/42‑151 (MQ=255)
                                                                                                   gtacgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTgg                                                     >  1:330589‑M1/41‑151 (MQ=255)
                                                                                                     acgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGt                                                    >  1:810466‑M1/39‑150 (MQ=255)
                                                                                                     acgtatcgaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTg                                                   <  2:46766‑M1/113‑1 (MQ=255)
                                                                                                            gaccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAAc                                            >  2:304929‑M1/32‑151 (MQ=255)
                                                                                                             accgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACg                                           >  1:368572‑M1/31‑151 (MQ=255)
                                                                                                              ccgtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGc                                          <  2:773632‑M1/122‑1 (MQ=255)
                                                                                                                gtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCt                                        <  1:1027332‑M1/124‑1 (MQ=255)
                                                                                                                gtcgccgtaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCt                                        >  1:68643‑M1/28‑151 (MQ=255)
                                                                                                                      gcaaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCgtgg                                  <  2:367426‑M1/130‑1 (MQ=255)
                                                                                                                        aaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCgtggtg                                <  2:429911‑M1/132‑1 (MQ=255)
                                                                                                                        aaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCgtggtg                                <  2:373593‑M1/132‑1 (MQ=255)
                                                                                                                        aaactgcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCgtggt                                 >  2:796764‑M1/20‑150 (MQ=255)
                                                                                                                             gcctgcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAAc                            >  2:36774‑M1/15‑150 (MQ=255)
                                                                                                                                 gcgaccatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCAt                       >  2:491454‑M1/11‑151 (MQ=255)
                                                                                                                                    accatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCtt                    <  2:720783‑M1/144‑1 (MQ=255)
                                                                                                                                    accatcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCtt                    >  2:18595‑M1/8‑151 (MQ=255)
                                                                                                                                      catcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCtttt                  >  1:100224‑M1/6‑151 (MQ=255)
                                                                                                                                       atcaCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTg                 >  1:239366‑M1/5‑151 (MQ=255)
                                                                                                                                           ctgcGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACa              <  2:296398/150‑1 (MQ=255)
                                                                                                                                             gcGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACAt             <  1:989553/149‑1 (MQ=255)
                                                                                                                                               gACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGaa         <  2:312767/151‑1 (MQ=255)
                                                                                                                                                aCCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAg        <  1:143903/151‑1 (MQ=255)
                                                                                                                                                  catcatTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCt      >  1:956264/1‑151 (MQ=255)
                                                                                                                                                    tcatTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa     >  1:715217/1‑150 (MQ=255)
                                                                                                                                                      atTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACg  <  2:291326/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
TCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACG  >  NC_000913/4181719‑4182019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.