| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 5,159 | 0 | G | A | 46.0% | 72.4 / 45.9 | 74 | intergenic (+139/‑75) | thrC/yaaX | L‑threonine synthase/DUF2502 family putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (35/5); new base A (0/34); total (35/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.36e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGG > NC_000913/5011‑5306 | tcatcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGgaga > 2:220753/1‑150 (MQ=255)tcatcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGgaga > 1:379539/1‑150 (MQ=255) catcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGTAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAATTTAGAGATTAGGATTGGGGAGaa > 1:515056/1‑150 (MQ=255) atcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAAt > 1:310378/1‑150 (MQ=255) caGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATaa < 2:553698/150‑1 (MQ=255) gTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATaacaa < 2:486818/151‑1 (MQ=255) aaaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑cc > 2:812015/1‑151 (MQ=255) aaaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑cc < 2:350713/151‑1 (MQ=255) tCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑ccgccg > 2:1078063/1‑151 (MQ=255) aTTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTtc > 1:952161/1‑151 (MQ=255) cATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTtctc > 2:471257/1‑150 (MQ=255) ttATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCa > 1:1135888/1‑149 (MQ=255) tATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCg > 1:1026583/1‑151 (MQ=255) aaTCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAAt > 2:981405/1‑151 (MQ=255) cAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAAtctc > 2:471405/1‑151 (MQ=255) ggCCGGGTTTTTTTTTATGCAGCCCGGTTTTTTTATGAAAAAATTAGGAAAAAAAATGACAGGAAAAAAGAAAAAATCCTAAATAAAGGCGTTAATTAAGAGATTGGGATTGCGAAAAATAAAAC‑CCGCCGTTCTCATCGAGTAAtctc < 2:675695/149‑1 (MQ=255) ggCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCg > 2:35481/1‑151 (MQ=255) gggTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGat > 1:493381/1‑150 (MQ=255) tttGTTTTTAGGCAGCCCGTTTTTTTAATAAAAAAATAAGGAAAAAAAAGGAGAGGAAAAAAGGAAAAATTCAAAAAAAAGGCGTTAACTAAGAGATAAGGAGGGGGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGatat < 1:255009/149‑1 (MQ=255) tGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGAc > 2:161945/1‑151 (MQ=255) tttttAGGCAGCCCGTTTTTTTTAAAAAAAAATTATGGAAAAAAATGAAAGGAAAAAGGGAAAAATTCAAAAAAAAGGCGGTACTTTAGAGATTGGTATGGGGAAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGAcc < 2:448965/149‑1 (MQ=255) tttATGCCGCCGGGTTTTTTTATGAAAAAATTATGGAAAAAAATGAAAGGAAAAAAGGAAAAATTCTCAATAAAGGCGTTAACTTAGAGTTGAGGATGGCGGAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGAcc < 1:1049834/148‑1 (MQ=255) ttATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCAt > 2:2402/1‑150 (MQ=255) ttAGGCAGCCCGGTTTTTTTATGAAAAAATTATGAAAAAAAATGAAAGGAAAAAAGGAAAAATTCTAAATAAATGCGGTAATTTAGAGATTAGGATGGCGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCAt < 2:624561/150‑1 (MQ=255) tGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACg > 1:271156/1‑151 (MQ=255) tGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACg > 1:719352/1‑151 (MQ=255) caccccGGTTTTTTTATAAAAAATTAATGAAAAAAAAGAAAAGGAAAAAAGAAGAAATTCTCAATAAGGGCGGTAATTAAGAGTTTAGGATGGGGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATaa < 2:331406/144‑1 (MQ=255) gCCCGGC‑TTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCa > 2:565672/1‑150 (MQ=255) ccgggttttttaATAAAAAAATTAGGAAAAAAAATGAGAGGAAAAAAGAAAAAATTCTAAAAAAATGCGTAAACTTAGATATTAGGTTGGGGAAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATa < 1:78804/137‑1 (MQ=255) cccGGTTTTTTTAAAAAAAAATTAGGGAAAAAAATGAAGGGAAAAAAGGAAAAATTCTAAAAAAATGCGTTAACTTAGAAATTAGGATGGGGGAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATGACgg < 2:934361/147‑1 (MQ=255) ccGGTTTTTTTATAAAAAAATTATGGAAAAAAATGACAGGAAAAAAGGAAAAATTCTAAAAAAAGGCGTTAACTTAGAGATTAGGATTGGGGAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAAt < 2:593097/151‑1 (MQ=255) ggtttttttAAAAAAAATTTATGGAAAAAAATGAAAGGAAAAAAGGAAAATTTCAAAATAAAGGCGGTAATTTAGAGATTAGGTTTGCGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGa < 2:587501/148‑1 (MQ=255) tttttttAAAAAAAAATTATGGAAAAAAAGGACAGGAAAAAAGAAAAATTTCCCAAAAAAGGCGTTAATTTAGAGATTAGGTGGGCGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGAt < 1:42610/149‑1 (MQ=255) ttttttATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATa > 2:658538/1‑150 (MQ=255) ttttttATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATa > 2:6240/1‑150 (MQ=255) ttttttATGAAAAAATTAGGAAAAAAAAAGAGAGGAAAAAAGGAAAAATTCCAAAAAAATGTGGTAACTAAGAGATTAGGTTGGCGGAAAAAACCAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATa < 1:115125/150‑1 (MQ=255) ttttATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATaaa > 2:81418/1‑150 (MQ=255) ttttAAAAAAAAATTAGGAAAAAAAAGGACAGGAAAAAAGGAAAAATTCTAAATAAAGCCGTTACTTTAGATTTTAGGATGGGGGAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATaaa < 2:1037930/150‑1 (MQ=255) tATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg > 2:25212/1‑150 (MQ=255) tATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg > 2:1141658/1‑150 (MQ=255) aaaaaaaaaTAAGGGAAAAAAATGAAAGGAAAAAAGGAAAAATTCTAAATAAATGGGTTAACTTAGAAATTGGGTTGGCGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 1:714019/143‑1 (MQ=255) aaaaaaTTATGGAAAAAAATGACAGGAAAAAAGGAGAAATTCTCAATAAATGAGGTATTTTAGAGATTAGGATTGGGGAAAATAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTa < 2:1166375/147‑1 (MQ=255) tGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaa > 2:686250/1‑150 (MQ=255) gaaaaaaaaTGACAGGAAAAAAGGAGAAATTCCAAATAAATGCGGTAAATGAGAGATTAGGAGGGGGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtgtg < 2:740422/143‑1 (MQ=255) aaaaaaaaGAAAGGAAAAAAGGAAATATTCAAAAAAAGTGCGTTAATTTAGAAAGAAGTATGGGGAAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaa < 1:504682/145‑1 (MQ=255) aaaaaaaTGACAGGAAAAAAGGAAAAATTCTAAAAAAATGGGGTAATTTAGAAATTAGGATTGGGGAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAGTCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaaaaa < 2:1083000/148‑1 (MQ=255) aaaagaacgggaaaaaaGGAAAAATTCACAAAAAATGCGGTATTTAAGATATGAGGATTGGGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATg < 2:221405/139‑1 (MQ=255) aaaaTGAAAGAAAAAAAGGAAAAATTCTAAAAAAAGGGGTAAATTTAGAGATAAGGATGGGGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATg < 1:365290/151‑1 (MQ=255) gACAGGGAAAAAGGAGAAATTATCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTACGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAAt > 1:74102/1‑150 (MQ=255) ggaaaaaaGGAAAAATTCTAAAAAAAGGCGTAAACTAAGAGATTAGGATGGGGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTAt < 2:603828/147‑1 (MQ=255) ggaaaaaaGAAAAAATTCTAAATAAATGCGTTAATTTAGAGATTAGGTTTGGGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTa < 2:650778/146‑1 (MQ=255) aaaaaaGAAGAATTTCTAAAAAAAGGGGGTAACTAAGAGATGAGGAGTGGGAAAAAAAATAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCt < 2:1043327/145‑1 (MQ=255) aaaaaGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGt > 2:246576/1‑150 (MQ=255) aaaaGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTAc > 2:697214/1‑151 (MQ=255) aaaGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACt > 2:90649/1‑151 (MQ=255) aaaGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACt > 1:108349/1‑151 (MQ=255) aagaaaaatttCTAAAAAAAGACGGTAATTTAAAATTTAGGA‑TGGTGAAAAAAACAACCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTc < 2:182869/142‑1 (MQ=255) aaaTTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACtt > 2:990149/1‑151 (MQ=255) atttCTAAAAAAATGGGATAACTTAGAGATTAGGTTTGGGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACttt < 1:1098034/149‑1 (MQ=255) aTAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGtt > 2:1071145/1‑151 (MQ=255) aTAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGtt > 2:742120/1‑151 (MQ=255) gCGGTAACTAAGAGTTTAGGATGGGGGAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTc < 2:203231/151‑1 (MQ=255) cGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCg > 1:172876/1‑151 (MQ=255) accTTAGAGATTAGGATTGCGAAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCg < 2:405960/145‑1 (MQ=255) aaCTTAGAGATTAGGATTGGGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCt < 2:661554/149‑1 (MQ=255) aaCTTAGAGATTAGGATGGCGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTcc < 2:526629/151‑1 (MQ=255) ttAGAGATTAGGATTGCGGAAAAAAAAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCa < 2:1006153/150‑1 (MQ=255) agaTTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgc > 1:654607/1‑150 (MQ=255) ttgggATGGCGGAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcagc < 1:471240/147‑1 (MQ=255) ttAGGTTGGGGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgca < 2:831457/148‑1 (MQ=255) ggATTGCGGAGAATAACAA‑CCGCGGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGcac > 1:904692/1‑149 (MQ=255) ggATGGGGGAAAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGcaca < 2:471924/150‑1 (MQ=255) tGCGGAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcag < 1:1078026/142‑1 (MQ=255) ggCGGAGAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCt < 2:1161605/149‑1 (MQ=255) ggggAAAAAAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTg < 2:599656/148‑1 (MQ=255) ggAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCgg > 1:8315/1‑151 (MQ=255) | TCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGG > NC_000913/5011‑5306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |