| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,804,946 | +T | coding (132/1203 nt) | proV → | glycine betaine/proline ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,804,946 | 1 | . | T | 89.1% | 453.6 / 46.2 | 129 | coding (132/1203 nt) | proV | glycine betaine/proline ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base . (8/6); new base T (51/64); total (59/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 132 total aligned reads displayed.
AGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTGGATATTGCCAA > NC_000913/2804798‑2805095 | aaTCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTa‑taa > 3:191423/1‑149 (MQ=255) ttCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGAc < 2:1045832/148‑1 (MQ=255) ttCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACg < 3:528865/149‑1 (MQ=255) ttCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACg < 3:862596/149‑1 (MQ=255) cTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGcc > 2:783389/1‑149 (MQ=255) cTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTA‑AAAGACGCCAGt > 2:1322542/1‑151 (MQ=255) aTTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGt < 3:1615054/150‑1 (MQ=255) gCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTgg < 2:457143/151‑1 (MQ=255) gCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTgg > 2:444279/1‑151 (MQ=255) cATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGc < 2:263236/151‑1 (MQ=255) tGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGcc > 3:1060931/1‑150 (MQ=255) tGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGcc > 2:1048599/1‑150 (MQ=255) ggCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCAt < 2:1585098/151‑1 (MQ=255) ggCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCAt < 2:15642/151‑1 (MQ=255) cAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTg > 3:976591/1‑151 (MQ=255) cAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTg > 2:771769/1‑151 (MQ=255) attaaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTga > 2:883587/1‑150 (MQ=255) taaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTga > 2:39267/1‑148 (MQ=255) aaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTgaaga < 2:1565888/150‑1 (MQ=255) aaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTgaaga > 2:131437/1‑150 (MQ=255) aattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGaagaag < 3:110705/151‑1 (MQ=255) attaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAgg > 3:968330/1‑151 (MQ=255) ttaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCg > 2:477990/1‑151 (MQ=255) taGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGc < 2:746610/150‑1 (MQ=255) aGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCg < 3:1383010/150‑1 (MQ=255) gAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCgag < 2:1003372/151‑1 (MQ=255) aTTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGata < 3:45412/151‑1 (MQ=255) ttAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGatat > 3:240069/1‑151 (MQ=255) aaaaaTCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATAttt < 3:919419/151‑1 (MQ=255) aaaaTCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTg > 3:250309/1‑151 (MQ=255) aTCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGtc > 2:643885/1‑150 (MQ=255) aTCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGtc > 3:1222517/1‑150 (MQ=255) ttATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGtca < 2:731386/147‑1 (MQ=255) ttATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGtca < 2:205231/147‑1 (MQ=255) tataAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATg > 2:244924/1‑151 (MQ=255) taAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATggg > 3:412110/1‑151 (MQ=255) aaaaTATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGATTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGATATATTTGTCATCATGGGa < 3:897941/151‑1 (MQ=255) aaaTATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGAt > 2:1234018/1‑151 (MQ=255) aaaTATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGAt > 2:52401/1‑151 (MQ=255) aaaTATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGAt < 2:903782/151‑1 (MQ=255) aaaTATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGAt < 2:340476/151‑1 (MQ=255) aaTATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGAtt < 2:1132225/151‑1 (MQ=255) aaTATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGAtt < 3:572827/151‑1 (MQ=255) atatTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGAtt > 3:287661/1‑150 (MQ=255) tatTTGGCGAGCATCCACAGCGAGCGTTAAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCTATTGAAGAAGGCGAGATATTTGTCATCATGGGATTa > 3:523078/1‑150 (MQ=255) ggCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCt < 3:1190598/151‑1 (MQ=255) gCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCt > 2:694191/1‑151 (MQ=255) cGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCg > 3:245514/1‑151 (MQ=255) cATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGt < 3:1056888/151‑1 (MQ=255) aTCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTa < 3:505037/151‑1 (MQ=255) cacaGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAAt > 3:856342/1‑151 (MQ=255) cacaGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAAt > 3:1106450/1‑151 (MQ=255) acaGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATc > 3:767847/1‑151 (MQ=255) acaGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATc > 3:212552/1‑151 (MQ=255) agcgagcgTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATcc > 2:1432469/1‑150 (MQ=255) agcgagcgTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATcc < 3:778319/150‑1 (MQ=255) agcgagcgTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCca < 2:570241/151‑1 (MQ=255) gcgagcgTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCcac < 3:777267/151‑1 (MQ=255) gTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGt > 2:696132/1‑151 (MQ=255) atatatCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCt < 2:951637/151‑1 (MQ=255) tatatCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTtc > 2:645206/1‑151 (MQ=255) atatCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCtt < 3:577391/150‑1 (MQ=255) atatCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCtt < 2:670329/150‑1 (MQ=255) atatCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCtt < 3:1632710/150‑1 (MQ=255) tatCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTtct > 3:783247/1‑151 (MQ=255) atCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTtctc < 3:698184/151‑1 (MQ=255) atCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTtct < 3:675061/150‑1 (MQ=255) cGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCaa < 3:1240711/151‑1 (MQ=255) gatcAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCAATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATATGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCa < 3:1206655/146‑1 (MQ=255) gAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCGTGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAAt < 2:1536629/151‑1 (MQ=255) ggACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTg < 3:1371602/151‑1 (MQ=255) cTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTg > 3:1097285/1‑151 (MQ=255) tttCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGTCTGATTg > 3:339870/1‑151 (MQ=255) ttCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGAtt < 3:1508517/149‑1 (MQ=255) ttCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTg > 2:368854/1‑150 (MQ=255) aaaaGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAacc > 2:112490/1‑151 (MQ=255) aaaaGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAacc > 2:334640/1‑151 (MQ=255) aaaaGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAaccc > 2:510930/1‑151 (MQ=255) gAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAacccacc > 3:210353/1‑151 (MQ=255) gAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAacccacc < 3:558557/151‑1 (MQ=255) gAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAacccacc > 3:482434/1‑151 (MQ=255) aCAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCcg < 2:1334377/151‑1 (MQ=255) aCAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCcg < 3:1222337/151‑1 (MQ=255) cAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCcgc > 2:962962/1‑151 (MQ=255) cAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCcg > 3:1209656/1‑150 (MQ=255) tCTGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGc > 2:601288/1‑150 (MQ=255) tGGAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCa > 3:325484/1‑149 (MQ=255) ggAAAAAACTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGt < 2:1042742/151‑1 (MQ=255) aaCTGGGCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCtgat < 2:1171277/151‑1 (MQ=255) aCTGGGCTATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCtgattg < 2:706212/151‑1 (MQ=255) gggCTATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCtgattga < 3:342245/149‑1 (MQ=255) ggCTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATg < 3:1374992/151‑1 (MQ=255) cTATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGgt > 3:1080102/1‑151 (MQ=255) tATCGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCTGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGgtg > 2:203738/1‑151 (MQ=255) tATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGgtgt > 2:392886/1‑151 (MQ=255) cGCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTgg < 2:1437024/151‑1 (MQ=255) gCTTGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTGGa < 2:514319/151‑1 (MQ=255) tGGCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTGGat < 3:1048521/149‑1 (MQ=255) ggCGTATAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTGGATAtt < 2:1142638/151‑1 (MQ=255) a‑aaaGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTGGATATTGCCaa > 2:121331/1‑150 (MQ=255) | AGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTA‑AAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTGGATATTGCCAA > NC_000913/2804798‑2805095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |