BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4398113	82 (0.820)	14 (0.140) +ACGCT	4/270	17.2	13.9%	coding (702/1848 nt)	mutL	methyl‑directed mismatch repair protein
*	?	NC_000913	4398114 =	92 (0.870)	14 (0.140) +ACGCT	4/270	17.2	13.9%	coding (703/1848 nt)	mutL	methyl‑directed mismatch repair protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 107 total aligned reads displayed.

CACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCAGC  >  NC_000913/4397966‑4398264

cACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑Ac                                                                                                                                                       <  2:377540/150‑1 (MQ=255)

cACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑Ac                                                                                                                                                       <  2:1281218/150‑1 (MQ=255)

 aCGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGc                                                                                                                                                     >  3:672775/1‑151 (MQ=255)

 aCGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGc                                                                                                                                                     <  3:1093804/151‑1 (MQ=255)

 aCGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGc                                                                                                                                                     >  2:846086/1‑151 (MQ=255)

 aCGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGc                                                                                                                                                     >  2:1513745/1‑151 (MQ=255)

 aCGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGc                                                                                                                                                     <  2:1254211/151‑1 (MQ=255)

   gATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCt                                                                                                                                                    >  3:401022/1‑150 (MQ=255)

    aTCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTa                                                                                                                                                   <  3:1424808/150‑1 (MQ=255)

      cAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTAcgc                                                                                                                                                >  2:1245531/1‑151 (MQ=255)

       aaCCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTAcgcg                                                                                                                                               >  2:1176400/1‑151 (MQ=255)

        aCCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTAcgcg                                                                                                                                               <  2:25909/150‑1 (MQ=255)

        aCCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCgg                                                                                                                                              >  3:939138/1‑151 (MQ=255)

         ccTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGc                                                                                                                                             >  2:59165/1‑151 (MQ=255)

           tGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTg                                                                                                                                           >  3:194788/1‑151 (MQ=255)

            gTCGCATAACGGTAAAATTGTGCGTCAGTTCCGCGTAGTGCGGGAAGGCGGGCAAAAAGGACGGCGCTTAGGCGCGATTTGCGGCCCCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTg                                                                                                                                           <  3:737074/150‑1 (MQ=255)

            gTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTgg                                                                                                                                          <  2:206673/151‑1 (MQ=255)

            gTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTg                                                                                                                                           <  3:858441/150‑1 (MQ=255)

              cGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTggg                                                                                                                                         <  3:1186238/150‑1 (MQ=255)

                       gTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATcc                                                                                                                               >  3:1301907/1‑151 (MQ=255)

                         aaaaTTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCaa                                                                                                                             <  2:616037/151‑1 (MQ=255)

                          aaaTTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCaa                                                                                                                             >  2:744357/1‑150 (MQ=255)

                          aaaTTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCaa                                                                                                                             >  3:1017917/1‑150 (MQ=255)

                           aaTTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAAt                                                                                                                           >  3:588230/1‑151 (MQ=255)

                            aTTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATc                                                                                                                          >  2:994118/1‑151 (MQ=255)

                                  cGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCAcacca                                                                                                                    <  3:1011340/151‑1 (MQ=255)

                                   gTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCAcaccac                                                                                                                   >  3:880770/1‑151 (MQ=255)

                                    tCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACg                                                                                                                  >  3:873003/1‑151 (MQ=255)

                                       gTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGccc                                                                                                               <  3:727776/151‑1 (MQ=255)

                                       gTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGccc                                                                                                               <  2:1043499/151‑1 (MQ=255)

                                       gTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGccc                                                                                                               >  2:528125/1‑151 (MQ=255)

                                         aCCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGc                                                                                                             >  2:536992/1‑151 (MQ=255)

                                            gcgcAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACt                                                                                                          >  2:1583550/1‑151 (MQ=255)

                                             cgcAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTg                                                                                                         <  3:827044/151‑1 (MQ=255)

                                              gcAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTgg                                                                                                        <  2:342311/151‑1 (MQ=255)

                                               cAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGc                                                                                                       >  2:1030453/1‑151 (MQ=255)

                                                   gCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACTCCACGCCCGCACTGGCAGa                                                                                                    <  3:668391/150‑1 (MQ=255)

                                                     cGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGaaa                                                                                                  <  3:518163/150‑1 (MQ=255)

                                                      ggAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAAtt                                                                                                >  2:1273622/1‑151 (MQ=255)

                                                       gAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTc                                                                                               >  2:1125181/1‑151 (MQ=255)

                                                           gCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTa                                                                                           <  2:349002/151‑1 (MQ=255)

                                                              ggCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAg                                                                                             <  3:1203296/151‑1 (MQ=255)

                                                              ggCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTg                                                                                        <  2:1307171/151‑1 (MQ=255)

                                                              ggCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTg                                                                                        >  2:103840/1‑151 (MQ=255)

                                                               gCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGc                                                                                       >  3:834228/1‑151 (MQ=255)

                                                                 aaaaaGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCt                                                                                      >  3:308352/1‑150 (MQ=255)

                                                                  aaaaGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTAc                                                                                    <  3:1638136/151‑1 (MQ=255)

                                                                   aaaGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACg                                                                                   <  3:1134491/151‑1 (MQ=255)

                                                                     aGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTg                                                                                 <  3:1597980/151‑1 (MQ=255)

                                                                     aGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTg                                                                                 >  3:490572/1‑151 (MQ=255)

                                                                     aGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTg                                                                                 >  2:266566/1‑151 (MQ=255)

                                                                             gcTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCg                                                                         <  3:149714/151‑1 (MQ=255)

                                                                                tAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCat                                                                      >  2:146592/1‑151 (MQ=255)

                                                                                 aGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCatg                                                                     <  3:1562119/151‑1 (MQ=255)

                                                                                     gcgATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATgc                                                                 <  3:471591/151‑1 (MQ=255)

                                                                                         tttGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGcgcg                                                              >  3:101295/1‑150 (MQ=255)

                                                                                           tGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGAt                                                            <  2:699399/150‑1 (MQ=255)

                                                                                           tGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATc                                                           >  2:1160518/1‑151 (MQ=255)

                                                                                            gCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATc                                                           <  3:570994/150‑1 (MQ=255)

                                                                                            gCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCg                                                          <  2:1568473/151‑1 (MQ=255)

                                                                                             cGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGc                                                         <  3:864990/151‑1 (MQ=255)

                                                                                              ggCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATc                                                           <  3:749154/148‑1 (MQ=255)

                                                                                                cACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTg                                                      <  3:1190353/151‑1 (MQ=255)

                                                                                                 aCCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCg                                                          >  3:590321/1‑151 (MQ=255)

                                                                                                 aCCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTg                                                      >  2:1395534/1‑150 (MQ=255)

                                                                                                 aCCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGa                                                     <  3:207496/151‑1 (MQ=255)

                                                                                                    gCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGatc                                                   >  3:415003/1‑150 (MQ=255)

                                                                                                             gAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCAcgcg                                          <  3:475075/150‑1 (MQ=255)

                                                                                                             gAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCAcgcg                                          >  3:1382649/1‑150 (MQ=255)

                                                                                                               aCAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATc                                       <  2:258114/151‑1 (MQ=255)

                                                                                                                cAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATcc                                      <  3:265378/151‑1 (MQ=255)

                                                                                                                cAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATcc                                      >  2:1110153/1‑151 (MQ=255)

                                                                                                                 aaGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCg                                     >  2:241260/1‑151 (MQ=255)

                                                                                                                 aaGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCg                                     <  2:961617/151‑1 (MQ=255)

                                                                                                                  aGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCAcgcg                                          >  2:1238316/1‑150 (MQ=255)

                                                                                                                  aGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGc                                    >  3:161436/1‑151 (MQ=255)

                                                                                                                    cgcTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGcc                                   >  3:352480/1‑150 (MQ=255)

                                                                                                                    cgcTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGcc                                   >  3:1231302/1‑150 (MQ=255)

                                                                                                                        ggCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGcc                              <  3:1635125/151‑1 (MQ=255)

                                                                                                                            aTTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCg                          <  3:784632/151‑1 (MQ=255)

                                                                                                                            aTTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCg                          <  3:421239/151‑1 (MQ=255)

                                                                                                                             ttGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCg                          >  2:187273/1‑150 (MQ=255)

                                                                                                                              tGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGa                         >  2:1584823/1‑150 (MQ=255)

                                                                                                                              tGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGa                         >  3:172107/1‑150 (MQ=255)

                                                                                                                               gAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAg                       <  2:574515/151‑1 (MQ=255)

                                                                                                                                 aTGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGAc                     <  2:404764/151‑1 (MQ=255)

                                                                                                                                   ggCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCAGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACa                    >  3:958278/1‑150 (MQ=255)

                                                                                                                                      aaCACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACt                <  2:987797/151‑1 (MQ=255)

                                                                                                                                          cGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTgggg            <  3:1510627/151‑1 (MQ=255)

                                                                                                                                           ggCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTggggg           >  3:578353/1‑151 (MQ=255)

                                                                                                                                            gCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGc          <  2:389315/151‑1 (MQ=255)

                                                                                                                                             cGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGcc         >  3:1251170/1‑151 (MQ=255)

                                                                                                                                                tctc‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGAt      >  2:1344453/1‑151 (MQ=255)

                                                                                                                                                   c‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGcc         <  3:278429/145‑1 (MQ=255)

                                                                                                                                                   c‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGAt      <  3:573781/148‑1 (MQ=255)

                                                                                                                                                   c‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATc     <  2:608324/149‑1 (MQ=255)

                                                                                                                                                   c‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa    <  2:588267/150‑1 (MQ=255)

                                                                                                                                                   c‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa    <  2:1011503/150‑1 (MQ=255)

                                                                                                                                                   c‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCGGCGAAGACAAACTGGGGGCCGa       >  3:371682/1‑147 (MQ=255)

                                                                                                                                                         aCGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCAGc  <  2:671487/151‑1 (MQ=255)

CACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTC‑‑‑‑‑ACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCAGC  >  NC_000913/4397966‑4398264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.