| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 436,516 | 0 | C | A | 42.9% | 102.9 / 37.3 | 77 | Q295K (CAA→AAA) | thiL | thiamine monophosphate kinase |
| Reads supporting (aligned to +/- strand): ref base C (35/9); new base A (0/33); total (35/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.81e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTC > NC_000913/436371‑436666 | tcGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATg > 2:717890/1‑151 (MQ=255) cGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTCCC‑TGTATCGGGCAAAt < 2:502994/149‑1 (MQ=255) cGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCaaa < 3:1444360/148‑1 (MQ=255) cGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAAt < 3:856010/149‑1 (MQ=255) cATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccg < 3:1224442/151‑1 (MQ=255) cATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccg > 3:831247/1‑151 (MQ=255) cATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccg < 2:473199/151‑1 (MQ=255) cATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccg > 2:480967/1‑151 (MQ=255) aTGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccgc < 2:424841/151‑1 (MQ=255) aTGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccgc > 2:1110611/1‑151 (MQ=255) aTGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGCGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccgc > 3:1254050/1‑151 (MQ=255) gTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccgccg < 3:1456943/151‑1 (MQ=255) aaCCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGatat > 3:1537401/1‑151 (MQ=255) cGGAACAGGCGCGGCGCGGGGCGCTCTCGGGCGGTAAAGATTACGAGTTGTGTTTCACTGGGCCGGAACGGACCCGTGGCGCGGTGGATGTGGCTCCGGGCCCCCGGGGCG‑TCCCTTTTCCC‑TGTATCGGGAAAATGACCGCCGatat < 3:1015512/148‑1 (MQ=255) ggAACGGGCGCGGGGTGGGGCGCTCTCGGGGGGTGAAAATTAGGAGTTTTTTTTCACTGTGCGGAAACTGACCGGTGGCGCGTTGGATGGGGCTCTGGGACCCCTGGGCG‑TCCCGTTTCCC‑TGTTTGGGGAAAATGACCGCCGATATCGaa < 2:549488/151‑1 (MQ=255) aGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCt > 3:460837/1‑151 (MQ=255) cgctgGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGtttt > 3:1549586/1‑150 (MQ=255) gggCGCTCTCTGGGGGTGAAGATTACGAGTTGTTTTTCCCTGGGCCGGAACTGACCCGTGGCGCGTTGGTTGTGGCTCTCGGACCCCTGGGCG‑TCCCTTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTAtt < 2:1520721/149‑1 (MQ=255) gggCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACAACTGGGCG‑TACCGTTTTAC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCg > 3:768023/1‑151 (MQ=255) gggCCCTCTCGGGGGGTGAAGATTACGGGTTGTGTTTCTCTGTGCCGGAACTGACCCGGGGCGCGCTGGTGGGGCCTCTCGGCCCCGGGGGCG‑TCCCTTTTCCC‑TGTATCGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTAt < 2:1583330/148‑1 (MQ=255) tctGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCg > 2:642132/1‑151 (MQ=255) ctGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCg > 2:1095188/1‑150 (MQ=255) tGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGa > 3:884263/1‑150 (MQ=255) gggggTGAAGATTACGGTTTGTGTTTCACTGTGCCGGAACTGACCCGTGGCGCGCGGGTTGTGGCTCTCGGACCCCGGGGCG‑TACCTTTTCCC‑TGTAGCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCg < 2:1079614/145‑1 (MQ=255) ggCGGTGAAGATTACGAGTTGTGTTTCTCTGTGCGGGAACTGACCCGTGGCGCGCTGGATGTGGCTCTGGGACCCCTGGGCG‑TCCCGTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACg < 2:1412501/145‑1 (MQ=255) ggTGAAGATTACGGGTTGTTTTTCACTGTGCCGGAACTGACCCGGGGCGCGCTGGATGTGGCTCTCGGACCCCGGGGCG‑TCCCTTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAAcc < 2:546879/149‑1 (MQ=255) ggTGAAGATTACGGGTTGTGTTTCTCTGTGCCGGAACTGACCGGGGGCGCGCTGGATGTGGCTCTCGGACCCCTGGGCG‑TCCCTTTTCCC‑TGTATCGGGAAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCt < 2:379750/150‑1 (MQ=255) gTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGt > 3:1565731/1‑151 (MQ=255) tGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGtt > 2:77252/1‑151 (MQ=255) gATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACAt > 3:498555/1‑151 (MQ=255) ttacgttttttttttCCCTGGGCGGAAACTGACCGGGGGCGCGTTGGATGGGGCTCTCGGCCCCCGGGGCG‑TCCTTTTTCCT‑TGTATGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTAc < 3:480932/135‑1 (MQ=255) ttACGGGTTGTTTTTCCCTGTGCGGGAACTGACCGGGGGCGCGTTGGTTGGGGCTCTCGGACCCCGGGGCG‑TCCCTTTTCCC‑TGTACGGGGAAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACAt < 3:370582/149‑1 (MQ=255) ttACGAGTTGTTTTTCCCTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACCCCTGGGCG‑TCCCTTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACAt < 2:346036/149‑1 (MQ=255) ttACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCGGGTTGTGGCTCTCGGACCCGTGGGCG‑TCCCGTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACAtt < 2:902351/150‑1 (MQ=255) gAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACt > 3:1122505/1‑151 (MQ=255) gTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTgg > 2:189617/1‑151 (MQ=255) ttGTTTTTCACTGTGCCGAAACTGACCCGTGGCGCGTTGGATGGGGCTCTGGGACCCGTGGGCG‑TCCCGTTTCCC‑TGTATGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTg < 2:799027/149‑1 (MQ=255) tggtgtTTCACTGTGCCGGAACTGACCCGTGGCGCGCTGGATGTGGCTCTGGGACGCTTGGGCG‑TCCCGTTTCCT‑TGTATCGGGCAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTg < 2:554077/147‑1 (MQ=255) tttCGCTGTGCCGGAACTGACCCGTGGCGCGTTGGTTGGGGCTCTCGGACGCCGGGGCG‑TCCCGTTTCCG‑TGTAGGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAgg < 3:996910/150‑1 (MQ=255) tcccTGTGCCGGAAGGTACGCGGGGCGCGTTGGATGTGGCTCCGGGGCATCGGGGGG‑TCCCTTTTACC‑TTTTGGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGat < 2:1474663/147‑1 (MQ=255) gggcgggAACTGACCCGGGGCGCGCTGGATGTGGCTCTCGGACCCTTGGGCG‑TCCCTTTTACC‑TGTTTCGGGAAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGa < 2:203826/144‑1 (MQ=255) cGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCAttt > 2:1237969/1‑151 (MQ=255) ggAACTGAACCGTGGCGCGTTGGATGTGGCTCGCGGACCCGGGGGCG‑TACCGTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCAt < 2:1295073/148‑1 (MQ=255) aaCTGACCGGGGGCGCGGTGGTTGTGGCTCTCGGACCCGGGGGCT‑TACCTTTTCCT‑TGTATGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGc < 3:374706/151‑1 (MQ=255) aaCTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGc > 3:1512825/1‑151 (MQ=255) cTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGcc > 2:1313268/1‑150 (MQ=255) tGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCAc > 2:1621653/1‑151 (MQ=255) tGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCAc > 2:1072248/1‑151 (MQ=255) aaCCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGc > 2:168148/1‑151 (MQ=255) cggTGGCGCGCTGGTTGTGGCTCTCGGCCCCTTGGGCG‑TACCGTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACg < 2:1304083/146‑1 (MQ=255) ccGGGGCGCGCGGGTTGTGGCTCGGGAACACGGGGGCT‑TCCTGTTTGCT‑GGTATGGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGc < 3:387871/144‑1 (MQ=255) tGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCTGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATa > 2:650222/1‑150 (MQ=255) gggCGCGGTGGTTGGGTCTCCCGGAC‑CCGGGGGG‑TTCCTTTTTCCTTGTATGGGAAAAAGAACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATa < 3:457042/149‑1 (MQ=255) gtgggtgggggCTCTCGAAC‑CCTGGGGGTTACTTTTTCCT‑TGTATGGGAAAAATGCCCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGa < 2:652137/139‑1 (MQ=255) tGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTc > 3:1076530/1‑150 (MQ=255) ggttggggCTCGCGGCCCCGTGGGCG‑TCCTTTTTCCC‑TATTTGGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGt < 2:1319787/142‑1 (MQ=255) ggATGTGGCTCTCGGCCCCCTGGGCT‑TACCTTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTcg < 2:830080/150‑1 (MQ=255) tgtgGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGa > 3:1063384/1‑150 (MQ=255) ggCTCTCGGACCCTGGGGCG‑TACTTTTTCCT‑TTTTTGGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGaa < 2:1461866/148‑1 (MQ=255) ggCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGaaa > 2:626205/1‑149 (MQ=255) tctcGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCATGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCg > 2:949162/1‑151 (MQ=255) cgggcccccgtGGGCG‑TCCGGTTTCCT‑TTTAGGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAg < 2:275531/137‑1 (MQ=255) cgcGGACACGGGGGCG‑TCCCTTTTCCT‑TGTATGGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCg < 2:1453104/148‑1 (MQ=255) ggcccccggggCG‑TCCCTTTTCCT‑TGTAGGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGAt < 2:895007/125‑1 (MQ=255) ggACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTg > 2:94613/1‑151 (MQ=255) ggcccccggggcttccGTTTTCCTTGTTTGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGaaa < 2:1589510/128‑1 (MQ=255) cacCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGa > 3:140935/1‑149 (MQ=255) ccTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGa > 2:861147/1‑147 (MQ=255) ggggCG‑TCCCTTTTCCT‑TTTATGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATg < 2:192942/149‑1 (MQ=255) gggCG‑T‑CCGTTTTCCTTGTAGGGGGAAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGa < 2:377937/150‑1 (MQ=255) aCCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATcc > 2:1643569/1‑151 (MQ=255) tttCCC‑TGTATCGGAAAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTg < 2:360854/150‑1 (MQ=255) tttACT‑TGTAGGGGGAAAAGGCCCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCg < 3:1043164/148‑1 (MQ=255) tGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCt > 3:157927/1‑150 (MQ=255) cGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGc > 3:723656/1‑151 (MQ=255) gggAAAATGCCCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTg < 2:1426017/149‑1 (MQ=255) ggCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTg > 3:1593165/1‑151 (MQ=255) cAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTc > 2:1535313/1‑151 (MQ=255) | TCGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTC > NC_000913/436371‑436666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |