Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 941,713 | 0 | T | G | 45.9% | 117.6 / 44.0 | 85 | V252G (GTG→GGG) | dmsA | dimethyl sulfoxide reductase, anaerobic, subunit A |
Reads supporting (aligned to +/- strand): ref base T (6/40); new base G (39/0); total (45/40) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.26e-18 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCGT > NC_000913/941566‑941862 | actactCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAACCGCGAATGAGTGGCGGTGGGGTGAc < 3:489397/151‑1 (MQ=255) actCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACt < 3:1601333/149‑1 (MQ=255) cctccGCGCAAATTGCGTAAGGTTTGAACTATCCCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTAc < 2:1008751/149‑1 (MQ=255) cctccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACt < 3:1434811/150‑1 (MQ=255) cctccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTAc > 2:1427244/1‑149 (MQ=255) cgcgCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCtt < 2:718322/151‑1 (MQ=255) gcAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGaa < 3:1060203/151‑1 (MQ=255) gcAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGCTTACTATCtt > 3:680530/1‑148 (MQ=255) cAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAAc < 3:422147/151‑1 (MQ=255) cAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCtttatatttt > 3:195612/1‑139 (MQ=255) aaaTTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTTCTATCTTTaa > 2:1377047/1‑149 (MQ=255) aaTTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTTCTATCTTTAACa > 2:813190/1‑150 (MQ=255) aTTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAgg < 2:491906/151‑1 (MQ=255) tGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGc < 2:1361443/150‑1 (MQ=255) gCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCAc < 3:23116/151‑1 (MQ=255) gAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTAATATTTTTAAAAAGCACGc > 3:524682/1‑150 (MQ=255) gTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGaa < 2:1590473/151‑1 (MQ=255) tttGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTTCTATCTTGAAAAAGCACGGCCGaa > 3:30100/1‑150 (MQ=255) ttGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGaaa < 2:1476860/150‑1 (MQ=255) ttGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGaaa < 3:1059845/150‑1 (MQ=255) gAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATc < 3:1480179/150‑1 (MQ=255) aaCTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTa < 2:673781/151‑1 (MQ=255) aaCTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTa < 3:1107301/151‑1 (MQ=255) aCTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTGAAAAAGCACGCCCGaaa > 2:924436/1‑146 (MQ=255) ataCCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATg < 3:793784/150‑1 (MQ=255) ataCCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGTGAACTACTATCTTTAACAAGCACGCCCGAAATCTAATGc > 2:218271/1‑151 (MQ=255) cggcggCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTGAACAGGCACCCCCGAAATCTAATGcccccc > 2:863415/1‑146 (MQ=255) cggcggCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTTAACAGGCACGCCCGAAATTTAAAGCCCGCacg > 3:678379/1‑149 (MQ=255) ggcggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGa < 3:764872/151‑1 (MQ=255) ggcggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATTTTGAACAAGCACGCCAGAAATATAATGCCCGc > 2:2359/1‑147 (MQ=255) ggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGAATTTCTATTTTTGAAACGCACGGCCGAAAAATTATGccccgatg > 3:1005043/1‑142 (MQ=255) ggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGAACTTCTATCTTTAACAGGCACGCCACAAAACTAATGCCCGCCTGatc > 4:9364/1‑150 (MQ=255) gcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGatcat < 3:1340845/151‑1 (MQ=255) tGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTTGGGGGAGTTACGATCTTTAAAAAGCACGCCAGAAAACTAAAGCCCCCATGatcat > 2:566974/1‑149 (MQ=255) ggCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGatcatcatc < 2:1031481/151‑1 (MQ=255) gCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTTCTATCTTTAAAAGGCACGCCAGAAAACTAATTCCCGCATGAACATCATCg > 2:938165/1‑151 (MQ=255) aTGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATcc < 2:711300/151‑1 (MQ=255) tGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTTAACAGGGACTCCAGAAAACTAATGCCCGCATGGTCATCATCGATcc > 3:1235398/1‑150 (MQ=255) gCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGGCCTACTATATTGAACAGGCGCACCAGAAAACTAATGCCCCCACGAGGATCCTCCATCCCCGCtat > 2:25070/1‑149 (MQ=255) cGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACCTACTCTCTTTAAAAGGCACCCCCGGAAATTAATGCCCGCCAGATAATCCTTGATTCCCCCTAAAcc > 2:252730/1‑149 (MQ=255) gTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGATTACTATTTTGAACAGGGACGCCAGAAAACTAATGCCCGCATGATCATCATCGATCCGCGCcata > 3:1502240/1‑146 (MQ=255) tCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCCTCGATCCGCGCTATACCGac > 2:146473/1‑150 (MQ=255) cGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGCTTACTATCTTGAAAAAGGAAGCCCGAAAACTAATGCCCGCCTGATCATCATCGAACCGCGCCATACCGa > 3:296501/1‑148 (MQ=255) ggATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACAcc < 2:795170/151‑1 (MQ=255) gATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGAATTACTTTTTTGAAAAAGCACGCCACAAAACTAATACCACCATTATCATAATCGATCGGCGCTCTACCGACAACg > 2:58057/1‑151 (MQ=255) gATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGAATTACTATCTTTAACAAGCACGCCAGAAATCTAATGCCCCCCTGATCATCATCGATCCCCGCTCTACCCACAcc > 2:1130045/1‑150 (MQ=255) cGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGTTTAATATATTTAAAAAGGAAGCCAGAAAATTAATGCCCGCCTGCTCATCATCTGGCCGCGCGATAACCACACCgggg > 3:1210849/1‑147 (MQ=255) gAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAACAGGCACGCCAGAAAACTAATGCCCGCATGATCATCATTGATCCGCGCCATACCCACACCCGGGcc > 3:119788/1‑150 (MQ=255) gAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAACAAGCACGCCAGAAAACTAATGCCCGCCTGATCATCATCGATCCGCGCCATACCGACACCGGGGcc > 2:1145415/1‑150 (MQ=255) aaaaCAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCgg < 3:1203401/151‑1 (MQ=255) cAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGgcgc < 2:1248427/151‑1 (MQ=255) tAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTGAACAAGCACGCCAGAAATCTAATGCCCCCATGATCATCATCGATCCGCGCTATACCGACACCCGTGCCGGGcgcg > 2:1629756/1‑149 (MQ=255) aaGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGaa < 3:402115/150‑1 (MQ=255) aaGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGaa < 3:463655/150‑1 (MQ=255) aGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAACAGGCACGCCAGAAAACTAAATCCCCCCCGATCCTCATCCATCCGCGCTATACCCACACCCGGGGCggg > 2:1621476/1‑143 (MQ=255) cTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAACAGGCACGCCAGAAATCTAATGCCCGCCTGATCATCATCGATCCGCGCTATACCGACACCGGGGCCGGGCGCGGAggt > 3:1011624/1‑148 (MQ=255) cTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTATTATCTTTAACAGGCACGCCAGAAAAATAATGCCCGCCTGATAATCATCTAACCGCGCCATACCCACACCGGTGCCGGGCGCGGAGATg > 3:122173/1‑151 (MQ=255) tGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTGAACAGGCACGCCAGAAATCTTATGCCCGCATGATCATCATCGATTCGCGCTATACCCACACCGGTGGCGGGggcg > 1:5434/1‑144 (MQ=255) tGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTGAACAGGCACGCCAGAAAACTAATGCCCGCCTGATCATCATCGATCCGCGCTATAACGACACCGGGGCCGGGGGCGAAGATg > 2:1174976/1‑150 (MQ=255) cTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCCTGATCATCATCGATCCGCGCTATACCGACACCGGGGGCGGGGGCGAAGATGA‑GTGGGTcc > 2:186193/1‑151 (MQ=255) tGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTGAACAAGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCCATAACGACACCCGTGCCGGGCGCGAAGAAGA‑GTGGATccc > 2:1510785/1‑151 (MQ=255) tGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTAt < 3:1630150/150‑1 (MQ=255) ggTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTAtt < 2:818822/150‑1 (MQ=255) gTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCg < 3:923179/151‑1 (MQ=255) taataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTAATATCTTTAACAAGCACGCCAGAAATCTAATGCCCGCCTGATCATCATCCATCCGCGCTATACCCACACCCGTGGCGGGCGCGGAGATGA‑GTGGGTCCCTAtt > 3:694800/1‑148 (MQ=255) aataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGt < 2:1145218/150‑1 (MQ=255) aataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGAATTAATATCTTTTACAGGCACGCCACAAAACTAATGCCCCCATGATCATCATCTCTCCCCGCTATACCCCCCCCCGGGCCCGGGGCGAAGATGA‑GTGGGTCCCCAttcttc > 3:26308/1‑151 (MQ=255) ataaCCCTGGCGAAACGCGAATGAGTGGCGGATGGGGGTTTTACTATCTTGAAAAGACACCCCAGCAAACTAATGTCCGCATGACCATCTTCGCAACGCGCCATACCGACACCCGGGCCGGGCGGGGAGATGA‑GTGGAGccccctttctcc > 3:1390699/1‑142 (MQ=255) taaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGAATTAATATCTTGAACAGGCCCGCCAGAAAACTAATGCCCGCATGATCATCATCGATACGCGCCATAACGACACCGGGGCCGGGGGCGGAGATGA‑GGGGATCCCCATTCGTcc > 3:1532378/1‑150 (MQ=255) taaCCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGCTTACCATTTTTAACAGGCACGCCCGAAAACTAATGCCCCCCTGATCATCATCACTCCGCCCCATACCCCCACCCGCGCCGGGCGCGCAGGAGA‑GTGGGTGCCTATTCTTcc > 3:1072565/1‑150 (MQ=255) aaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACCATCCTTAAAAAGCAACCCAAAAATCTAAAGCCCGCAAGATCAATAATGATCCGCCCCATACCCACACCGGTGCCCGGGGCGAAAATGAGGGGGATcccatttggtc > 2:1514681/1‑141 (MQ=255) cccTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATTTTGAACAGGCACGCCAGAAAACTAATGCCCGCATGATCATCATCGATCCGCGCTATACCCACACCCGTGCCGGGCGCGGAGATGA‑GTGGGTCCCTATTCGTCCggg > 3:540443/1‑150 (MQ=255) ggCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAAc < 3:334648/149‑1 (MQ=255) ggCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAAc < 3:750139/149‑1 (MQ=255) ggCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAg < 3:84175/151‑1 (MQ=255) gAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAACAAGCACGCCAGAAATCTAATGCCCCCCTGATCATCATCGATCCGCGCCATACCCACACCGGGGCCGGGCGCGAAAATGA‑GTGGATCCCTTTTCGTCCcgg > 3:1425225/1‑143 (MQ=255) cgcgAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGc < 2:497705/151‑1 (MQ=255) gAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGtt < 3:814307/151‑1 (MQ=255) gAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGtt < 2:645220/151‑1 (MQ=255) aGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTa < 2:620613/151‑1 (MQ=255) gTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCt < 2:266862/151‑1 (MQ=255) tGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTg > 2:187830/1‑151 (MQ=255) gggTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGc < 3:1353717/151‑1 (MQ=255) ggTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCg < 2:213730/151‑1 (MQ=255) ggTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCg > 2:200370/1‑151 (MQ=255) tGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCGt > 3:438049/1‑150 (MQ=255) | ACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGA‑GTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCGT > NC_000913/941566‑941862 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |