| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,222,233 | 0 | G | A | 44.4% | 105.1 / 34.7 | 81 | pseudogene (60/75 nt) | ycgH | pseudogene; putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base G (37/8); new base A (0/36); total (37/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.42e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAG > NC_000913/1222086‑1222372 | tgAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGaa > 2:1222753/1‑150 (MQ=255) aGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAAtata < 3:640397/151‑1 (MQ=255) aGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAAtata < 2:959300/151‑1 (MQ=255) tCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAAtata > 2:339318/1‑149 (MQ=255) cGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGt < 2:906695/151‑1 (MQ=255) cAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTg < 3:367101/151‑1 (MQ=255) aGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAt > 3:1634301/1‑151 (MQ=255) tGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATccc > 3:1178365/1‑151 (MQ=255) ggggCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCccg < 3:578015/151‑1 (MQ=255) gggCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCccgc < 2:516907/151‑1 (MQ=255) ggCGAGTAATTTGGGGGAAATTAAACTGGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCccgcc < 3:1493266/151‑1 (MQ=255) gAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGtt > 2:1557937/1‑151 (MQ=255) aGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGtt > 4:10544/1‑150 (MQ=255) tGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTaaa > 2:1018998/1‑150 (MQ=255) ggggAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTaaaaa > 2:691468/1‑150 (MQ=255) gggAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAAc > 3:307116/1‑151 (MQ=255) aaaTTAATCTTGGGGTAAGTGGCACCCTGAACCCAGCGGCCAGCGTGGGGGGAA‑G‑GGGGGCGTGCAGTGGGGTGATAATGTCTACAATGCCCCCGCGGGGATGGGGGCCTTAAAATATAATTTCTGATCCCGCCGTTAGCTAAAAAAcc < 3:304113/149‑1 (MQ=255) aaaTTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACcgc > 2:1455368/1‑151 (MQ=255) ttAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGcgtc > 3:696290/1‑151 (MQ=255) ttAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGcgtc > 2:275108/1‑151 (MQ=255) tGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTc > 3:333600/1‑150 (MQ=255) ggggaaaaTGGCACCCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GGGGGCGGGCAGCGGGTTAATAATGGCTACAATGACCCCGAGGTGAGGGTGGGCCTAAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTa < 2:1217547/141‑1 (MQ=255) ggCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCAt > 3:1093777/1‑151 (MQ=255) gCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATc > 3:1590041/1‑151 (MQ=255) aaaGGGCAACCTAAATCCAGCGGCCGGCGTCGGGGGAA‑T‑GGGGGCGTGCGGCGGGGTGATAAGGGCTACAATGACCCCGCAGTGATGGTGGGCCGAAAATATAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGAcg < 3:1157531/151‑1 (MQ=255) ggCAGCCTGAACCCGGCGGCCAGCGTCTGGTGAG‑G‑GGGGGGGTGCGGGGGGGTGATAAGGGCTACAATGACCCCGCGTTGATGTTGGCCCTAAAATATAAGTTTTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGAcgc < 2:1557694/148‑1 (MQ=255) ccggAACCCGGCGGCCGGCTTCTGGGGAA‑G‑GGGGGGGTGCGGGGGGGTGATAATGGCTAAAATGACCCCGCGGTGTGGGGGGGCCTAAAATATAGGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACat < 3:850427/147‑1 (MQ=255) ccTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATAGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACat > 2:767702/1‑150 (MQ=255) ccTGAACCCAGCGGCCGCCCTGGGGGGAG‑G‑GGGGGGGGGCAGTGGGGTGATAATGCCTAAAAAAACGCCAAAGTGGTGGGGGGTCTGAATTATAAGTCCTGCCCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACa < 2:564589/149‑1 (MQ=255) cTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGCGATAATGGCTACAATGACACCGCAGTGATGGCGGGCCTGAAATATAAGCTCTGATCCCGCCGCTAGCTAAAAAACCGCGTCGGATTCATCGACGCGGTACctat > 3:1608280/1‑151 (MQ=255) cTGAACCCGGCGGCCAGCGTCGGGGGAA‑T‑GGGGGGGTGCAGTGGGGTGATAATGGCAAAAATGCCCCCGCAGGGTTGGTGGTCCTAAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACat < 2:855883/149‑1 (MQ=255) gAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg > 2:1267860/1‑150 (MQ=255) aacccggCGGCCGGCGTC‑GGGGAA‑TGGGGGGGGTGCGGCTGGGTAAAAATGGCTACAATGCCACCGAGGTGGTGGGGGGCCTAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACatat < 2:1187708/142‑1 (MQ=255) aaTCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGa > 2:792444/1‑150 (MQ=255) aTCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGaa > 2:515534/1‑150 (MQ=255) aTCCAGCGGCCAGCGTCGGGGGAA‑T‑GTGGGCGGGCGGCTGGGTGAAAATGCCTACAATGACCCCGCGGTGAGGGGGGGCCTAAAATATAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGaaa < 2:520829/151‑1 (MQ=255) gCGGCCGGCGTCTGGGGAA‑G‑GTGGGCGTGCAGCTGGGTAATAATGGCTAAAATGCCCCCGAGGTGATGGTGGGCCTAAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAAtatta < 2:425802/151‑1 (MQ=255) gCGGCCGGCGTCGGGGGAA‑G‑GTGGGCGTGCAGCTGGGTAATAATGGCTACAATGACCCCGCAGTGATGGTGGGCCTAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAat < 2:1328728/147‑1 (MQ=255) gCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAAtatt > 3:802383/1‑150 (MQ=255) cggccggcGTCGGGGGAA‑T‑GTGGGCGTGCAGTTGGGTGATATTGGCTACAATGACCCCGCAGTGTTGGTGGGCTTAAAATATAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAAtatt < 2:290092/149‑1 (MQ=255) ggCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTTATAATGGCTAAAATGACCCCGCAGTGAGGGTGGGCTTAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAatat < 3:1163038/147‑1 (MQ=255) ggCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATattatt > 2:1478196/1‑151 (MQ=255) gcccggCGTCGGGGGAA‑G‑GTGGGCGTGAAGGTGGGTGATAATGGCTACAATGACCCCGAGGTGATGGTGGGCTTAAAATAAAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAAtattat < 3:692377/145‑1 (MQ=255) ggccggcgtgggggAA‑TGGGGGGCGGGCAGCGGGTTGAAAAGGGCTAAAATGCCCCCGCAGGGGTGGTGGGCTAAAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAata < 3:89444/136‑1 (MQ=255) gCGTCGGGGGAA‑T‑GGGGGCGTGCAGCTGGGTAATAATGGCTAAAATGACACCGCAGTGATGGGGGGCATAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAttttt < 3:686064/149‑1 (MQ=255) tCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCg > 2:1505457/1‑151 (MQ=255) ggggAG‑T‑GTGGGGGTGCAGGGGGGTAATAATGGCAAAAAGACCACCGAGGGGGGGGTGGGCTTAAAAAAAAAGTTCAAACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGAt < 3:401390/150‑1 (MQ=255) ggggAAGT‑GTGGGCGGGCAGCTGGGTGAAAAGGCAAACAACCCCCCCATAGTGATGGGGGGCCTAAATTATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGAt < 3:1441937/151‑1 (MQ=255) ggggAA‑T‑GGGGGCGTGCGGCTGGGTGAAAATGGCTAAAATGACCCCGCAGTGAGGGTGGGCCTAAAATATAAGTTTTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATa < 2:723590/151‑1 (MQ=255) ggggAA‑T‑GGGGGCGGGCAGCTGGGTGAAAAGGTCTAAAAGGCCCCCGAGGTGAGGGGGGCCCTAAAATATAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATa < 2:116528/151‑1 (MQ=255) ggggAA‑T‑GGGGGCGGGCAGCGGGGTGATAATGGCTACAATGACCCCGCGGTGATGGTGGGCCTAAAATATAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCg < 2:1133455/148‑1 (MQ=255) gtgGGCGTGCAGCTGGGTGATAATGGCAAAAATGACCCCGCAGTGATGGGGGCCATAAAATATAATTTCTGTCCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCAc < 2:988674/148‑1 (MQ=255) gggggCGTGCAGTGGGTTGATAATGGCTACAATGACCCCGTGGTGATGGGGGCCCTAAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGc < 3:241423/144‑1 (MQ=255) gggCGTGCAGGGGGGTAATAATGGCTAAAATGCCCCCGAGGGGGTGGGGGGCCGAAAATATAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCAt < 2:485253/150‑1 (MQ=255) gCGTGCGGCTGGGTAATAAGGTCTAAAATGCCCCCGCAGTGAGGGTGGCCTAAAAATAAAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGgt < 3:1037554/151‑1 (MQ=255) cAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcat > 3:610159/1‑151 (MQ=255) cAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcat > 2:422161/1‑151 (MQ=255) aGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcatc > 2:373380/1‑151 (MQ=255) gggTGATAATGGCTACAATGACCCCGCAGTGATGGTGGGCCTAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAAtt < 2:1186791/151‑1 (MQ=255) ggTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTg > 2:636872/1‑151 (MQ=255) tGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGcc > 3:346642/1‑151 (MQ=255) aTAATGCCTAAAATGACCCCGCAGTGATGGTGGGCCTAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGt < 2:309310/151‑1 (MQ=255) aagggCTAAAATGACCCCGCAGTGGGGGGGGCCCTAAAATATAATTTCGGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGt < 2:1175761/146‑1 (MQ=255) ggCTACAATGACCCCGCAGTGATGGTGGGCCTAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATc < 2:277786/150‑1 (MQ=255) tACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAAc > 2:253326/1‑150 (MQ=255) tGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCAtt > 3:391093/1‑151 (MQ=255) acacCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTg > 2:1397225/1‑151 (MQ=255) cacCGCGGTGATGGTGGGCCTAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCAt < 2:784992/147‑1 (MQ=255) cacCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGc > 2:1363716/1‑151 (MQ=255) acCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCg > 2:1445036/1‑151 (MQ=255) ccgatgtgggggtggGCTTAAAATAAAAGTTCTGCTCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCgg < 2:301100/141‑1 (MQ=255) ccGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCgg > 3:1526757/1‑151 (MQ=255) ccGCAGTGAGGGGGGGCCTAAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCgg < 2:97355/151‑1 (MQ=255) cGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCggg > 3:1417929/1‑151 (MQ=255) cGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCggg > 2:1587068/1‑151 (MQ=255) gtgggggtggGCCTAAAATATAATTTCGAACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGt < 2:1630785/143‑1 (MQ=255) tGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCttt > 2:759849/1‑151 (MQ=255) gATGGGGGGCCTAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCttt < 2:1444031/150‑1 (MQ=255) ggtggGCCTAAAATATATTTTTTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCtt < 2:1120766/146‑1 (MQ=255) ggggggCCTAAAATATATTTCCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTa < 2:1335312/145‑1 (MQ=255) ggggggCCTAAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAg < 2:129555/146‑1 (MQ=255) | TGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAA‑T‑GTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAG > NC_000913/1222086‑1222372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |