Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 345,328 | 0 | C | A | 46.1% | 142.3 / 58.3 | 102 | intergenic (+337/‑76) | yahL/yahM | uncharacterized protein/uncharacterized protein |
Reads supporting (aligned to +/- strand): ref base C (50/5); new base A (0/47); total (50/52) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 8.94e-24 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 102 total aligned reads displayed.
AAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTG > NC_000913/345179‑345475 | aaaaaaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCa < 2:321770/151‑1 (MQ=255) aaaaaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCa > 3:1646248/1‑150 (MQ=255) aaaaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCaaa < 2:577064/151‑1 (MQ=255) aaaaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCaa > 2:367949/1‑150 (MQ=255) aaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCaaaaa < 3:106162/151‑1 (MQ=255) tGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑cc > 2:1051349/1‑151 (MQ=255) tGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑cc > 3:1338595/1‑151 (MQ=255) ctcATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGcc > 3:769812/1‑150 (MQ=255) tcATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCAt > 3:1515629/1‑151 (MQ=255) cATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCAtt > 3:75111/1‑151 (MQ=255) gCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGc > 3:809207/1‑151 (MQ=255) cAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGc > 3:1560711/1‑150 (MQ=255) tGTTTTGTGAATGTTTTGTTTGACATTCATATAAAAAAAATCATAATCCCATCT‑TGTTTGTGGGGGG‑TTTTTTCTGTATCTTCCGCACCGCACTAAAGCCTGACAAAAAATATGCTGTAAGG‑CTCATATAAAAAA‑CCGCCATTAGCt < 2:1108603/147‑1 (MQ=255) ttttGTGAATGTGTTGTTTGACATTCATATAAAAAAATTCATAATCCCATCA‑TGTTTGTGTGGGT‑TTTTTTCTGTATCTTACGCATCCCACTCAAGCCTGACAAAAAATAGGATTAAAGG‑CTAATATAAAAAA‑CCGCCATTAGCtcatca < 3:1236722/150‑1 (MQ=255) tttGTGAATGTTTTGGTTGACATTCATAGGAAAAAAATCATAATCCCATCA‑TTTTTGTGGGGGT‑TTTTTTCTGTATCTTACGCATCGCACCAAGGCCTGACAAAAAATATGCTGTAGGC‑TTAATATAAAAAA‑CCGCCATTAGCTCATCAg < 2:1169995/150‑1 (MQ=255) ttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAgg > 2:962742/1‑150 (MQ=255) tgtgATTGTGTTGTTTGACTTTAATATAAAAAAAATCATAATCCCATCA‑TTTTTGGGTGGGG‑TTTTTTCTGTTTCTTACCAACCGCACCCAACCCTAAAAAAAAATAGGATGTAAGG‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGa < 3:622582/150‑1 (MQ=255) gtgAATGTGTTGGTTGAAATTCATAAAAAAAAAATTATAATCCCATCA‑TGTTGGTGTGGGT‑TTTTTTCTGTATCTAACGCACCGCCCCCACCCCTGAAAAAAAATAGGCTGTAAGG‑CAAATAAAAAAAA‑CCGCCATTAGCTCATCAGGaa < 3:582418/150‑1 (MQ=255) gtaattgtttgggttaACATTCATATAAAAAAAATAAAAATCCCATCA‑TGTTGGTGGGGGT‑TTTTTTCTTTATCTTCCCCACCCCCCCCAAGCCGAACAAAAAATATGCTGAAAGG‑CTAAAATAAAAAT‑CCGCCATTAGCTCATCAGGaa < 3:516067/139‑1 (MQ=255) gAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAag > 2:493543/1‑149 (MQ=255) tgtttggtttgACTTTAATAAAAAAAAAATCATAACTCCATCT‑TTTTTGTGTGGTT‑TTTTTTTTTTATCTTACCCCCCCCACAAAAGCCAGAAAAAAAATATTCTATAGGG‑CACATATAAAAAC‑CCGCCATTAGCTCATCAGGaa < 3:1459407/137‑1 (MQ=255) tgtgTTGTTTGACTTTAATAAAAAAAAAATCAAAATCCCATAA‑TTTTTGTGTGGGT‑TTTTTTTTGTATCTTACGCCCCCCACCCAACCCTGAAAAAAAATATGCTGAAAGG‑CTAATAAAAAAAA‑CCGCCATTAGCTCATCAGGAaga < 3:1488909/147‑1 (MQ=255) tgtgTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGc > 2:788073/1‑149 (MQ=255) tgtgTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGc > 2:1073890/1‑149 (MQ=255) ttttgtttgACATTCATATAAAAAAAATCATAATCCCATCA‑TGTTTGTGTGGGG‑TTTTTTCTGTTTTTTCCGCATCGCACCCAAGCCTAAAAAAAAATTTGCTGAAGGG‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAg < 2:1164418/147‑1 (MQ=255) tgtTGGTTGACATTCATATAAAAAAAATCATAATCCCATCA‑TGTTTGTGTGGGG‑TTTTTTCTGTATCTTACGCATCGCACTAAACCCTGAAAAAAAATATGCTGAAAGG‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAga < 2:566625/150‑1 (MQ=255) gttggttgACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAgacg > 2:492942/1‑151 (MQ=255) ttggttgACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAgacg > 2:1436769/1‑150 (MQ=255) ttggttgACATTAATATAAAAAAAATAATAATCCCATCA‑TGTTTGTGGGGGT‑TTTTTTTTTTATCTTACGCACCCCACCAAAGCCTGAAAAAAAATATGCTGAAAGG‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAgac < 2:1216429/149‑1 (MQ=255) ttggttgACATTAATAAAAAAAAAATAATAATTCCATCT‑TGTTTGGGGGGGT‑TTTTTTTTTTATCTTACGCACCCCCCCAACGCCTGAAAAAAAATATGCTGAAAGG‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAgac < 3:913979/149‑1 (MQ=255) ttggttgAAATAAATATAAAAAAAATATTATTACCATCT‑TGTTGGTGTGGGT‑TCTTTTCTTTATGGTACCCTTCGCACACATGCCTAGAAAAAAATTTTC‑GCAAGGTCTCA‑ATCAAAAATCCGCCATTAGCTCATCAGGAAGAGCAgac < 3:878983/149‑1 (MQ=255) ggttgACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAgacgac > 2:168979/1‑150 (MQ=255) gttgACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACa > 3:1102172/1‑150 (MQ=255) ttgTCATTCTTAAAAAAAAAAATATACTCCCTCCA‑TGTTTGTGTGGGG‑TCTTTTCTTTATCTTCCCCTTCGCCCGCAAGCCTCACAAAAAATGTGGTATAAGC‑CTAATAACAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAgac < 2:1254339/145‑1 (MQ=255) ttcatattcataaaaaaaaaaaaaaaaTCCATAATTGTTTGTGTGGGG‑TTTTTTCTTTTCTTTACCAATCGCACTCACCCCGGACAGAAAATATGTTTAAAGG‑CTAAAATAAAAAG‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACaa < 2:1184423/137‑1 (MQ=255) ttaatatAAAAAAAATAATAATCCCATCT‑TGTTGGTGGGGGT‑TTTTTTTTGTTTTTACCCCACCCCCCACAAGCCAGAAAAAAAATATGCTGAAAGG‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCa < 3:318812/144‑1 (MQ=255) atatGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGAttgt > 3:869840/1‑151 (MQ=255) atatAAAAAAAATCTTAATCCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAAAAAATATGCTGTAAGG‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGAt < 2:315683/148‑1 (MQ=255) atGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGAttgttg > 2:1317518/1‑151 (MQ=255) aaaaaaaTCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTAt > 2:1522425/1‑151 (MQ=255) aaaaaTCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATgg > 2:48742/1‑151 (MQ=255) tAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGt > 3:1413072/1‑151 (MQ=255) aaTCCCATCT‑TTTTGGGGGGGGG‑TTTTTTTTTTTTCTTCCGCTCCCCCCTAAAGCCGGAAAAAAAATATGTTGAAAGG‑CTAATAAAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACggg < 3:1236973/148‑1 (MQ=255) aaTCCCATCA‑T‑TTTGTGGGGGGTTTTTTTTTTTATTTTACGCACCGCCCTAAACCCTAAAAAAAAATATGCTTAAAGG‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGt < 2:832736/150‑1 (MQ=255) ttCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCg > 2:1368051/1‑151 (MQ=255) tCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCg > 3:226736/1‑150 (MQ=255) cccttcttGTTTTGGTGGGT‑TTTTTTCTGTTTCTTCCGCGCCCCACTCAAGCCTAAAAGAAAAGATGATTTAGGC‑CTCAAATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCg < 3:651524/143‑1 (MQ=255) ccATCT‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAAAAAATATGCTGAAAGG‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGtt < 2:31146/147‑1 (MQ=255) ccATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCg > 2:892635/1‑149 (MQ=255) tca‑tTTTTGTGGGGGT‑TTTTTTTTTTATCTTACGCACCGCACAAAAGCTGAAAAAAAAATAGGCTGAAAGG‑TTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGa < 3:1613900/147‑1 (MQ=255) tca‑tGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGcc > 2:596235/1‑151 (MQ=255) tca‑tGTTGGTGTGGGT‑TTTTTTCTGTATCTTCCCCATCGCACCCAACCCTGAAAAAAAATATGCTGTAAGG‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAg < 3:418039/148‑1 (MQ=255) a‑tGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTc > 3:295181/1‑151 (MQ=255) tGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCg > 3:529087/1‑151 (MQ=255) gTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCg > 3:916086/1‑150 (MQ=255) gTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCg > 2:268101/1‑150 (MQ=255) gtgGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCgg > 3:588602/1‑151 (MQ=255) gggggtttttttctttttctTACGCACCCCCCTCAAGCCTGAAAAAAAATATGCTAAAAGC‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCgg < 3:909223/143‑1 (MQ=255) gggg‑TTTTTTCTTTATCTTACGCACCGCCCACAAGCCTGAAAAAAAATATGCTGTAAGG‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGt < 3:1395898/150‑1 (MQ=255) gggg‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTc > 3:515115/1‑151 (MQ=255) tCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAAc > 2:70231/1‑151 (MQ=255) ttttCTTTATCTTACCCACCCCACTCAACCCTGAAAAAAAATATGCTGAAAGG‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAAc < 2:729848/149‑1 (MQ=255) ttttCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACtt > 3:157920/1‑151 (MQ=255) tttgtttttctcccGCATCGCACACAGGCCTGAAAAAAAATATGTTGAAGGT‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACtt < 3:1461268/137‑1 (MQ=255) ttCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACtttt > 2:542887/1‑151 (MQ=255) tttATCTTACCCATCGCACACAACCTTGACAAAAAATATGTTGAAAGC‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCa < 3:1173339/148‑1 (MQ=255) tGTTTCTTCCGCATCCCACTCAAGCCTAAAAAAAAATATGCTGTAAGC‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTc < 2:198500/149‑1 (MQ=255) tGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCa > 3:1218262/1‑150 (MQ=255) tACGCACCGCACTAAAGCCTGAAAAAAAATATGCTGTAAGG‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCaaaa < 2:723639/146‑1 (MQ=255) cgcaccgcacTCAAGCCTGAAAAAAAATATGCTGTAAGG‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACtctt < 2:111229/149‑1 (MQ=255) cGCATCCCACTCAAGCCGGAAAAAAAATATGCTGTAAGG‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACtcttct < 2:1219840/151‑1 (MQ=255) aTCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGa > 2:907223/1‑150 (MQ=255) cccacacaAGCCGGAAAGAAAATATGCTGAAGGC‑CTCATAAAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAAt < 3:1612108/148‑1 (MQ=255) gCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATc > 2:1456530/1‑150 (MQ=255) caccaaacccggACAAAAAATATCCTTAAAGC‑CTAATATAAAAAC‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACtcttc < 2:1237615/132‑1 (MQ=255) aCTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATc > 3:1078859/1‑148 (MQ=255) cacaccccTGACAAAAAATATGTTGTAAGG‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCa < 3:244215/142‑1 (MQ=255) cTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATc > 2:200340/1‑147 (MQ=255) agccctaaaaGAAAATATGGTAAAAGC‑TTAATAAAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCAGTCCAACTTTTCAAAACTCTTCTGAATCAGa < 3:916243/138‑1 (MQ=255) aaGCCTAAAAAAAAATTTGTTGTAAGG‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCa < 2:809254/145‑1 (MQ=255) aGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATcccc > 3:494652/1‑151 (MQ=255) aGCCTAACAAAAAATATGCTGTAGGG‑CTCAAATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAg < 2:786433/145‑1 (MQ=255) ccgaaaaaaaaaTATGCTTTAAGG‑CTAAAATAAAAAG‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATcc < 3:1307211/139‑1 (MQ=255) ccTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCtt > 2:17600/1‑151 (MQ=255) ccTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCtt > 2:704284/1‑151 (MQ=255) aaaaaaaaTATGCTGAAGGG‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCttatta < 3:1279731/147‑1 (MQ=255) aaaaaaTATGCTGAAAGG‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCtta < 2:144277/144‑1 (MQ=255) aaaaaaTATGCTGAAAGG‑CTAATATAAAAAG‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTatc < 3:1603667/149‑1 (MQ=255) aGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTatc > 3:415270/1‑151 (MQ=255) aaaTATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTatcatc > 3:1601820/1‑151 (MQ=255) gcggTAAGG‑CTAATATAAAAAA‑CCGCCATTAGCTTATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCt < 2:1346739/145‑1 (MQ=255) tGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCaa > 2:958966/1‑150 (MQ=255) aaGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTg > 2:63403/1‑151 (MQ=255) aaGG‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCaaa < 2:1047530/148‑1 (MQ=255) aaGG‑CTCATAAAAAAAC‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATccc < 3:1625818/142‑1 (MQ=255) gg‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGa < 2:919733/151‑1 (MQ=255) gg‑CTAATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGa < 2:785820/151‑1 (MQ=255) gg‑CTAATAAAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGt < 3:1176957/148‑1 (MQ=255) g‑CTCATATAAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGaa < 3:712854/151‑1 (MQ=255) cTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAAc > 2:1608674/1‑151 (MQ=255) | AAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCA‑TGTTTGTGTGGGG‑TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAA‑CCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTG > NC_000913/345179‑345475 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |