Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,678,755 IS5 (–) +4 bp coding (610‑613/984 nt) yphF ← putative sugar ABC transporter periplasmic binding protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2290113NA (NA)76 (1.030) 61/298 0.3 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 2678755 = 0 (0.000)coding (613/984 nt) yphF putative sugar ABC transporter periplasmic binding protein
* ? NC_000913 = 26787580 (0.000)70 (0.950) 60/298 0.4 100% coding (610/984 nt) yphF putative sugar ABC transporter periplasmic binding protein
?NC_000913 = 3131340 NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 142 total aligned reads displayed.

ATCCGAACCGAAAACAGCAATTTTTCCGGCCTGATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAA  >  NC_000913/2678606‑2678904
                                                                                                                                                     |                                                                                                                                                     
     aaccgaaAACAGCAATTTTTCCGGCCTGATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAgg                                                                                                                                                  >  1:742468‑M1/1‑148 (MQ=255)
         gaaAACAGCAATTTTTCCGGCCTGATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGGTTTTCACCAACGGAAATCGCTTTATCTAAggaagg                                                                                                                                              >  2:871555‑M1/1‑144 (MQ=255)
           aaaCAGCAATTTTTCCGGCCTGATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgc                                                                                                                                           >  2:664027‑M1/1‑142 (MQ=255)
            aaCAGCAATTTTTCCGGCCTGATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcg                                                                                                                                          <  2:834699‑M1/151‑11 (MQ=255)
               aGCAATTTTTCCGGCCTGATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaat                                                                                                                                       <  2:433354‑M1/151‑14 (MQ=255)
               aGCAATTTTTCCGGCCTGATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaat                                                                                                                                       <  2:533573‑M1/151‑14 (MQ=255)
                      tttCCGGCCTGATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggg                                                                                                                                >  1:1095798‑M1/1‑131 (MQ=255)
                        ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGc                                                                                                                               <  2:246037‑M2/25‑1 (MQ=255)
                        ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCg                                                                                                                              >  1:60304‑M2/126‑151 (MQ=255)
                         gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGa                                                                                                                             <  2:303770‑M2/27‑1 (MQ=255)
                          tctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGAc                                                                                                                            >  2:1029547‑M2/124‑151 (MQ=255)
                          cGGCCTGATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaa                                                                                                                             >  1:882554‑M1/1‑127 (MQ=255)
                             gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACaa                                                                                                                          <  1:609766‑M2/30‑1 (MQ=255)
                              acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAAtt                                                                                                                        >  1:499742‑M2/120‑151 (MQ=255)
                               cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAAttt                                                                                                                       >  2:1051188‑M2/119‑151 (MQ=255)
                               cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAAttt                                                                                                                       >  2:601284‑M2/119‑151 (MQ=255)
                                gATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattctt                                                                                                                       >  1:662531‑M1/1‑121 (MQ=255)
                                 gcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTgc                                                                                                                     <  1:190248‑M2/35‑1 (MQ=255)
                                 gcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTgc                                                                                                                     <  2:1091782‑M2/35‑1 (MQ=255)
                                       actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCg                                                                                                               >  1:1091725‑M2/111‑151 (MQ=255)
                                       aTTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                               >  1:585024‑M1/1‑114 (MQ=255)
                                       aTTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttatcggctg                                                                                                               <  2:411610‑M1/151‑38 (MQ=255)
                                         tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCggg                                                                                                             >  1:974339‑M2/109‑151 (MQ=255)
                                         tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCggg                                                                                                             >  2:683421‑M2/109‑151 (MQ=255)
                                         tACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctga                                                                                                              <  1:566974‑M1/150‑39 (MQ=255)
                                           ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGa                                                                                                            >  1:513189‑M2/107‑150 (MQ=255)
                                            tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAAc                                                                                                          >  1:1009732‑M2/106‑151 (MQ=255)
                                            gTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactca                                                                                                          <  2:1033961‑M1/151‑43 (MQ=255)
                                             tACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGCGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                           >  2:355004‑M1/1‑108 (MQ=255)
                                              aCCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                        <  2:15248‑M1/151‑45 (MQ=255)
                                                  cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCggg                                                                                                     <  1:162069‑M2/51‑1 (MQ=255)
                                                   actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGAt                                                                                                   <  1:802521‑M2/53‑1 (MQ=255)
                                                     tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGAttt                                                                                                 >  1:734965‑M2/97‑151 (MQ=255)
                                                      tACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                                >  1:214126‑M1/1‑99 (MQ=255)
                                                      gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGAtttt                                                                                                <  2:380443‑M2/56‑1 (MQ=255)
                                                      gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGAttt                                                                                                 <  1:205734‑M2/55‑1 (MQ=255)
                                                       aCCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGTCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                                <  2:1020048‑M1/150‑53 (MQ=255)
                                                       aCCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                                <  2:32245‑M1/150‑53 (MQ=255)
                                                        ccGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt                                                                                              <  1:547277‑M1/151‑55 (MQ=255)
                                                            gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAAct                                                                                          >  2:882424‑M2/90‑151 (MQ=255)
                                                              cGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                                                                                        <  2:692820‑M1/151‑61 (MQ=255)
                                                              aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAActtc                                                                                        <  2:340968‑M2/64‑1 (MQ=255)
                                                                   agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCa                                                                                    >  2:216942‑M2/83‑150 (MQ=255)
                                                                        atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCt                                                                              <  1:869278‑M2/74‑1 (MQ=255)
                                                                          cGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat                                                                            >  1:1025425‑M1/1‑79 (MQ=255)
                                                                              catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGt                                                                        >  1:187849‑M2/72‑151 (MQ=255)
                                                                               atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTc                                                                       <  1:882334‑M2/81‑1 (MQ=255)
                                                                                  atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCt                                                                    >  1:952304‑M2/68‑151 (MQ=255)
                                                                                  atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCt                                                                    >  2:54657‑M2/68‑151 (MQ=255)
                                                                                    gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGc                                                                  >  1:906037‑M2/66‑151 (MQ=255)
                                                                                       ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGcaca                                                               <  1:463025‑M2/89‑1 (MQ=255)
                                                                                          aaTGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                                            <  2:945380‑M1/151‑89 (MQ=255)
                                                                                            ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAAc                                                          >  1:554465‑M2/58‑151 (MQ=255)
                                                                                               tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTc                                                       >  2:872367‑M2/55‑151 (MQ=255)
                                                                                               cGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                                       <  1:1151701‑M1/151‑94 (MQ=255)
                                                                                                atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACt                                                         <  2:968508‑M2/95‑1 (MQ=255)
                                                                                                    agaTCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc                                                  >  2:139336‑M1/1‑53 (MQ=255)
                                                                                                     gaTCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca                                                 <  2:134055‑M1/151‑100 (MQ=255)
                                                                                                      aTCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaattgctttaa                                                     >  1:282365‑M1/1‑51 (MQ=255)
                                                                                                       cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCtt                                               >  2:595367‑M2/47‑151 (MQ=255)
                                                                                                        agatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTc                                              <  1:812122‑M2/106‑1 (MQ=255)
                                                                                                         cGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                             <  2:273277‑M1/151‑104 (MQ=255)
                                                                                                            cGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt                                          >  2:818579‑M1/1‑45 (MQ=255)
                                                                                                              tGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                         >  1:973311‑M1/1‑43 (MQ=255)
                                                                                                               ggAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                         >  2:1132284‑M1/1‑42 (MQ=255)
                                                                                                               aaacatgatctcatatcaggggcttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATtg                                       <  1:251069‑M2/113‑1 (MQ=255)
                                                                                                                  gaTAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc                                    >  1:786922‑M1/1‑39 (MQ=255)
                                                                                                                  catgatctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATtgatg                                    <  1:623982‑M2/116‑1 (MQ=255)
                                                                                                                   aTAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccg                                   >  1:413698‑M1/1‑38 (MQ=255)
                                                                                                                     aaTTAGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtt                                 >  1:818951‑M1/1‑36 (MQ=255)
                                                                                                                       ttAGTTTTTCACCAACGGAAATCGCTTTATCTCAggaaggtgcgaataagcggggaaattcttctcggctgactcaatcatttcatttcttcttgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc                               >  1:623921‑M1/1‑34 (MQ=255)
                                                                                                                        ctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGc                               >  1:331090‑M2/30‑150 (MQ=255)
                                                                                                                        ctcatatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGc                               >  1:573692‑M2/30‑150 (MQ=255)
                                                                                                                         aGTTTTTCACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct                              <  2:813686‑M1/150‑119 (MQ=255)
                                                                                                                          catatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCa                              <  2:195162‑M2/122‑1 (MQ=255)
                                                                                                                          catatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAAt                            <  2:734989‑M2/124‑1 (MQ=255)
                                                                                                                            tatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAAttt                          >  1:704212‑M2/26‑151 (MQ=255)
                                                                                                                            tatcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAAttt                          >  1:1153426‑M2/26‑151 (MQ=255)
                                                                                                                             atcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAAttt                          <  2:552826‑M2/126‑1 (MQ=255)
                                                                                                                             atcagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAAttt                          <  2:576071‑M2/126‑1 (MQ=255)
                                                                                                                               cagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTc                        <  1:315300‑M2/128‑1 (MQ=255)
                                                                                                                               cagggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCg                       >  2:260497‑M2/23‑151 (MQ=255)
                                                                                                                                cACCAACGGAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                      >  2:845731‑M1/1‑25 (MQ=255)
                                                                                                                                 gggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGc                     <  2:769768‑M2/131‑1 (MQ=255)
                                                                                                                                  ggacttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCt                    <  1:649188‑M2/132‑1 (MQ=255)
                                                                                                                                    acttgttcgcaccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTgg                  >  1:1010855‑M2/18‑151 (MQ=255)
                                                                                                                                       ggAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaag                  >  1:472954‑M1/1‑18 (MQ=255)
                                                                                                                                        gAAATCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgt              >  1:392752‑M1/1‑17 (MQ=255)
                                                                                                                                          aaTCGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta            <  2:986327‑M1/151‑137 (MQ=255)
                                                                                                                                            gtactttccCTAAAACAGTCCCTTCCGGATTAGCGACAATCTGCGCTTCGGGAACGCGGGATTTTAACACTTCTTCGAATCCTTTACGTCGATGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGGCAAtttt          >  1:498650‑M2/10‑151 (MQ=255)
                                                                                                                                             cGCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc          <  1:267448‑M1/150‑139 (MQ=255)
                                                                                                                                              gCTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc        <  2:913707‑M1/151‑141 (MQ=255)
                                                                                                                                              accttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTAt        <  2:877926‑M2/144‑1 (MQ=255)
                                                                                                                                               ccttccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTAtt       >  2:83724‑M2/7‑151 (MQ=255)
                                                                                                                                               cTTTATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc       >  2:507257‑M1/1‑10 (MQ=255)
                                                                                                                                                 ttATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca      <  2:487188‑M1/150‑143 (MQ=255)
                                                                                                                                                  tccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTg      <  2:799013‑M2/146‑1 (MQ=255)
                                                                                                                                                  tccCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTg      <  2:234776‑M2/146‑1 (MQ=255)
                                                                                                                                                  tATCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag     <  2:585045‑M1/150‑144 (MQ=255)
                                                                                                                                                    cCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCaa  <  1:371029‑M2/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ATCCGAACCGAAAACAGCAATTTTTCCGGCCTGATTTTGATTACGTACCGCTTTTACCGCGCCGAGTGTCGCACCGCCCGATTCCCCCATAATGGCGTTGAGATCCGGCGTGGAGATAATTAGTTTTTCACCAACGGAAATCGCTTTATCTAAAACAGTCCCTTCCTGATTAGCGACAATTTGCGCGCCGGGAACGCGGGATTTTAAAACTTCTTCAAATCCTTTACGTCGCTGCACACAAACTTCAAAGGCTTCGCAATTGATGACGGCAATTTTCGGCTGGTCAATTTTATTGGCAA  >  NC_000913/2678606‑2678904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.