Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,573,5000AG41.2% 104.7 / 23.2 69pseudogene (1087/1503 nt)yjiTpseudogene
Reads supporting (aligned to +/- strand):  ref base A (2/38);  new base G (28/0);  total (31/38)
Fisher's exact test for biased strand distribution p-value = 4.36e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GTGAAGATGGTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTCCCTCGGG  >  NC_000913/4573351‑4573650
                                                                                                                                                     |                                                                                                                                                               
gtgAAGATGGTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGgat                                                                                                                                                                <  1:321909/151‑1 (MQ=255)
    aGATGGTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGGTGGGGGGGTG‑Gtt                                                                                                                                                           >  2:129230/1‑151 (MQ=255)
      aTGGTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑Attgt                                                                                                                                                         <  2:345282/151‑1 (MQ=255)
        ggTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑Attgttg                                                                                                                                                       <  2:936953/151‑1 (MQ=255)
         gTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTGCGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTgg                                                                                                                                                      <  1:914595/151‑1 (MQ=255)
             ggAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGGGGTGGGGGGGGG‑GTTGTTggggg                                                                                                                                                   >  2:1173539/1‑148 (MQ=255)
               aaGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGGGGTGGGGGGGAG‑ATTGTTggg                                                                                                                                                     >  2:902638/1‑146 (MQ=255)
                  tctcTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGTTGGGGGGGTG‑ATTGTTGGGGG‑CA‑t                                                                                                                                              >  1:187685/1‑148 (MQ=255)
                       ggCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACt                                                                                                                                        <  2:186611/149‑1 (MQ=255)
                             gggCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑c                                                                                                                               <  2:728209/150‑1 (MQ=255)
                             gggCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑Ca                                                                                                                              <  1:731672/151‑1 (MQ=255)
                             gggCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑Ca                                                                                                                              <  2:229133/151‑1 (MQ=255)
                                ccAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTg                                                                                                                          <  1:526104/151‑1 (MQ=255)
                                    ccTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAAt                                                                                                                     <  1:344282/151‑1 (MQ=255)
                                     cTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGGGGGGTG‑ATTGTTGGGGG‑GA‑TTAAACTTGATG‑A‑CA‑AGG‑aaa                                                                                                                      >  2:651675/1‑149 (MQ=255)
                                      tATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGGTGGGGGGGTG‑ATTGTTGGGGG‑GA‑TTAAAATTTTTG‑A‑CA‑ggggaaat                                                                                                                     >  2:1098734/1‑143 (MQ=255)
                                      tATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGGGCTGGGGGGGTG‑ATTGTTTGGGG‑GA‑TTAAAATTGTTG‑A‑CA‑GGG‑aaaat                                                                                                                    >  1:444023/1‑148 (MQ=255)
                                         gCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGGGCTGGGGGGGTG‑GTTGTTGGGGG‑GA‑TTAAACTTTATT‑A‑CA‑GGG‑AAAATggc                                                                                                                 >  2:634181/1‑148 (MQ=255)
                                         gCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGCGGTGGGGGGGAG‑GTTGTTTGGGG‑CA‑TTTAACTTTGTG‑A‑CA‑GTG‑GAAATgacc                                                                                                                >  2:201782/1‑148 (MQ=255)
                                            tctcTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑tt                                                                                                             <  2:499368/150‑1 (MQ=255)
                                              tctGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGGGCTGGAGGGGTG‑GTTGTTTGGGG‑CA‑TTTAACTTGATG‑A‑CA‑GGG‑AAAtttgcctttg                                                                                                            >  2:1193097/1‑142 (MQ=255)
                                                tGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGGTGGGGGGGGG‑GTTGTTGGGGG‑GA‑TTAAAATTGATG‑A‑CA‑GTG‑AAAATGCCA‑TTGGTg                                                                                                         >  2:1189061/1‑150 (MQ=255)
                                                tGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGGGCTGGGGGGGTG‑ATTGTTGGGGG‑CA‑TTTAACTTGATG‑A‑CA‑GGG‑AAATTGCCA‑tttg                                                                                                           >  2:43266/1‑146 (MQ=255)
                                                          acagGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCTGGCTGGGGGGGTG‑GTTGTTGGGAG‑GC‑TTTAACCTGATT‑A‑CC‑GTG‑AAAATTCCC‑TTTGTGAGGGGCCGt                                                                                                >  2:168856/1‑149 (MQ=255)
                                                             ggCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGGTTGTCGTTAGTGGCTCGGGCTGGGGGGGTG‑ATTGTTTGGGG‑GA‑TTTAAATTGAAGAA‑AA‑GGG‑AAATTGCC‑‑TTGGGGGGGGGGCGTTAAcc                                                                                           >  2:1196342/1‑151 (MQ=255)
                                                              gCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCt                                                                                          <  2:121386/151‑1 (MQ=255)
                                                              gCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCt                                                                                          <  1:4306/151‑1 (MQ=255)
                                                                   aGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATc                                                                                     <  2:355504/151‑1 (MQ=255)
                                                                    gTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCg                                                                                    <  2:965195/151‑1 (MQ=255)
                                                                     ttCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGGTGGGGGGGGG‑GTTTTTTGGGG‑CA‑TTTAAATTTGTG‑ACCG‑GGG‑AAATTCCCT‑TTGG‑GAGGTGCCGTTTACCTTCCTc                                                                                     >  2:681648/1‑149 (MQ=255)
                                                                     ttCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGGGCTGGGGGGGTG‑GTTTTTGGGGG‑GA‑TTAAAATTTATG‑G‑AA‑GTG‑AAATTGCCC‑TTGGGGAGGGGCCGTTTAACtt                                                                                         >  2:1068886/1‑145 (MQ=255)
                                                                      tCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGGGGGGTG‑ATTTTTTGGGG‑GA‑TTTAAACTGTTG‑A‑CA‑GGG‑AAAATGGCC‑TTGGGGAGGGGCCGTTAAACtt                                                                                         >  2:159169/1‑144 (MQ=255)
                                                                       cGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGtt                                                                                  <  1:520476/150‑1 (MQ=255)
                                                                       cGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCCGGGTGGAGGGGGGCTTTGTTGGG‑G‑GA‑TTGAACATTATG‑G‑CA‑GTG‑GAAATGCCACTTGGGGGGGGGCGTTTACCCTTc                                                                                        >  2:195757/1‑145 (MQ=255)
                                                                       cGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGGGGCTCGGGGTGGGGGGGGG‑GGTTTTGGGGG‑CACTAAAAATTGTGG‑A‑AG‑AGG‑AAATTGCCA‑TGGGGGGGGGGCGGTTAACCt                                                                                          >  1:719913/1‑143 (MQ=255)
                                                                        gATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGGGGGGTG‑ATTTTTGGGGG‑GA‑TTTAAATTTATG‑A‑CAGGGG‑AAATTGCAC‑TTGG‑GAGGGGGCGTTAAACtt                                                                                         >  1:1193291/1‑142 (MQ=255)
                                                                        gATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCACCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGa                                                                                <  1:244452/151‑1 (MQ=255)
                                                                         aTTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGAt                                                                               <  1:872912/151‑1 (MQ=255)
                                                                           tACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATg                                                                              <  1:685749/150‑1 (MQ=255)
                                                                            aCGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGc                                                                             <  1:497397/150‑1 (MQ=255)
                                                                                 aaaGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGGGGGGTG‑GTTTTTGGGGG‑GA‑TTTAAATTTATG‑A‑AA‑GGG‑AAAATGCCC‑TTTGGGGGGGGGCGGTAACCTTCTttgttggttgcgatc                                                                        >  1:959342/1‑141 (MQ=255)
                                                                                     cGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCTTTAACCTTCATCGTTGATGCAGATCAATg                                                                    <  1:821540/150‑1 (MQ=255)
                                                                                          tGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGGGGTGGGGGGGGG‑GTTGTTGGGGG‑GA‑TTTAACTTGATG‑A‑CA‑GGGAAAATTGCC‑‑TTGGGGGGGGGGCGGTAACCTTTATCGTTGATTCAGATCAATGGGT‑ggt                                                             >  2:472960/1‑149 (MQ=255)
                                                                                                ttGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGGGGGGGGGGGGTG‑ATTTGTGGGGG‑CA‑TTAAACTTTTTG‑G‑CC‑GAG‑AGAATTCCA‑TTGGGGAGGGGGGGGCTTCCCTTATTCTTGTTGCAGATCAATGGCT‑Gttttaagg                                                       >  1:44148/1‑145 (MQ=255)
                                                                                                   gcaggcaAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACa                                                    <  2:910604/151‑1 (MQ=255)
                                                                                                    caggcaAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAg                                                   <  1:325841/151‑1 (MQ=255)
                                                                                                      ggcaAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGc                                                 <  1:805971/151‑1 (MQ=255)
                                                                                                          aaaTCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTTGGGGGGTG‑GTTGTTGGGGG‑GC‑TTAAAATTTATG‑A‑AA‑GTGAAAATTGCC‑‑TTGGTGAGGGGCCGTTTAACTTCTTCGTTGATGCAGATCAATGGGT‑GTTACAAGGGCAGGgtt                                               >  2:701382/1‑149 (MQ=255)
                                                                                                           aaTCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGcttctt                                            <  1:730404/151‑1 (MQ=255)
                                                                                                            aTCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGcttctt                                            <  2:373713/150‑1 (MQ=255)
                                                                                                            aTCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTg                                           <  2:932230/151‑1 (MQ=255)
                                                                                                              ccATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGc                                          <  2:187698/150‑1 (MQ=255)
                                                                                                                   ggCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGtgtg                                    <  2:340669/151‑1 (MQ=255)
                                                                                                                     cAGGTTTGTCGTTAGTGGCTCGCGCTGGGGGGGTG‑ATTGTTGGGGG‑GA‑TTAAATTTGATG‑A‑CA‑GTG‑AAATTGGCA‑TTGGGGGGGGGCCGTTTACCCTCCTCGTTGATGCAGAGCGATGGCT‑GGTATAGGGAGAGGCTTCTTGCActg                                      >  1:155164/1‑147 (MQ=255)
                                                                                                                       ggTTTGTCGTTAGTGGCTCGGGCTGGAGGGGTG‑GTTTTTTGGAGCCA‑TTAAA‑TTAGTG‑G‑GC‑GTG‑AAATTGCCA‑TTTGGGAGGTGTCGTTAAACTTCCTCGTTGTTGCAAATCAATGGGT‑GTTTAAGGGGCAGGCGTCTTTCTgtgt                                     >  1:903643/1‑146 (MQ=255)
                                                                                                                          ttGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAagc                              <  2:1057499/150‑1 (MQ=255)
                                                                                                                          ttGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAagc                              <  1:675417/150‑1 (MQ=255)
                                                                                                                           tGTCGTTAGTGGCTCGTGCTGGAGGGCTG‑ATTGTTGGGGG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAAATGCCC‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTTCAGGGACAGGCTTCTTGCAGTGTGCg                                  >  2:292023/1‑145 (MQ=255)
                                                                                                                            gTCGTTAGTGGCTCGTGCTGGAGGGGTG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGGGCCGGTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTTCAGTGTGCGAagcagc                           >  2:160431/1‑151 (MQ=255)
                                                                                                                            gTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAagcag                            <  1:1114400/150‑1 (MQ=255)
                                                                                                                              cGTTAGTGGCTCGGGGTGGAGGGGTG‑ATTGTTGGGGG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGGGGGGCCGGTAACCTTCATCGTTGATGCAGATCAATGGGTGGTTACA‑GGACCGGCTTTTTTGAGTGGGGGGAACAGCg                          >  1:927511/1‑150 (MQ=255)
                                                                                                                                      gCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGa                 <  1:428512/151‑1 (MQ=255)
                                                                                                                                         cGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGAt                <  1:506772/149‑1 (MQ=255)
                                                                                                                                            gCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGc           >  2:292214/1‑151 (MQ=255)
                                                                                                                                            gCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGc           <  1:778933/151‑1 (MQ=255)
                                                                                                                                            gCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGc           >  2:107009/1‑151 (MQ=255)
                                                                                                                                               ggAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTc         <  2:967177/150‑1 (MQ=255)
                                                                                                                                                 aGGGATG‑ATTGTTGGGAG‑CA‑TTAAGCTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGGGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTCCCt      <  2:714395/151‑1 (MQ=255)
                                                                                                                                                  gggATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTCCCTc     <  2:997898/151‑1 (MQ=255)
                                                                                                                                                   ggATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTCCCTCg    <  1:696020/151‑1 (MQ=255)
                                                                                                                                                     atg‑atTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTCCCTCggg  <  2:329181/151‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                               
GTGAAGATGGTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATG‑ATTGTTGGGAG‑CA‑TTAAACTTGATG‑A‑CA‑GTG‑AAATTGCCA‑TTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCT‑GTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTCCCTCGGG  >  NC_000913/4573351‑4573650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑