Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,907,410 IS5 (+) +4 bp coding (23‑26/210 nt) cspC ← stress protein, member of the CspA‑family

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1397238NA (NA)84 (1.150) 67/296 0.1 97.6% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 1907410 = 2 (0.030)coding (26/210 nt) cspC stress protein, member of the CspA‑family
* ? NC_000913 = 19074132 (0.030)94 (1.270) 70/298 0.1 97.9% coding (23/210 nt) cspC stress protein, member of the CspA‑family
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 179 total aligned reads displayed.

TGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCA  >  NC_000913/1907263‑1907563
                                                                                                                                                      |                                                                                                                                                      
aaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTaa                                                                                                                                                        <  2:589107‑M2/4‑1 (MQ=255)
 ggCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTaa                                                                                                                                                        <  2:416381/150‑1 (MQ=255)
   actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCt                                                                                                                                                     >  1:100471‑M2/145‑151 (MQ=255)
   actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCt                                                                                                                                                     >  2:763072‑M2/145‑151 (MQ=255)
      ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTg                                                                                                                                                    <  2:935144‑M2/8‑1 (MQ=255)
            aTTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcga                                                                                                                                             >  2:1080385‑M1/1‑139 (MQ=255)
             acgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAAt                                                                                                                                           <  2:933422‑M2/17‑1 (MQ=255)
              ttCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaac                                                                                                                                           <  2:550602‑M1/150‑14 (MQ=255)
              ttCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaac                                                                                                                                           >  2:304375‑M1/1‑137 (MQ=255)
                 gAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagt                                                                                                                                       <  1:383015‑M1/151‑18 (MQ=255)
                   aCTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtcc                                                                                                                                     >  2:902614‑M1/1‑132 (MQ=255)
                    cTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccc                                                                                                                                    >  1:169572‑M1/1‑131 (MQ=255)
                    aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGcc                                                                                                                                    <  2:375678‑M2/24‑1 (MQ=255)
                     tCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccct                                                                                                                                   >  2:490389‑M1/1‑130 (MQ=255)
                      cAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccct                                                                                                                                   <  1:856635‑M1/150‑22 (MQ=255)
                          gTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatat                                                                                                                              >  2:54203‑M1/1‑125 (MQ=255)
                           ttCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatg                                                                                                                             >  1:660905‑M1/1‑124 (MQ=255)
                               gACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagat                                                                                                                         <  2:31492‑M1/151‑32 (MQ=255)
                               gACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgag                                                                                                                           <  1:187859‑M1/149‑30 (MQ=255)
                               gACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgag                                                                                                                           <  1:340186‑M1/149‑30 (MQ=255)
                               gACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatga                                                                                                                            <  1:631581‑M1/148‑29 (MQ=255)
                                aacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAAtt                                                                                                                        <  2:811219‑M2/36‑1 (MQ=255)
                                    gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCtt                                                                                                                    <  1:472723‑M2/40‑1 (MQ=255)
                                    gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCtt                                                                                                                    <  1:1077187‑M2/40‑1 (MQ=255)
                                      ctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCtt                                                                                                                    >  2:718271‑M2/110‑149 (MQ=255)
                                      aGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                                  >  1:530581‑M1/1‑113 (MQ=255)
                                        ccAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                                <  1:682942‑M1/151‑41 (MQ=255)
                                        ccAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGGAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                                >  1:4617‑M1/1‑111 (MQ=255)
                                         aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGAtt                                                                                                               <  1:882120‑M2/45‑1 (MQ=255)
                                            agTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                                            >  1:40142‑M1/1‑107 (MQ=255)
                                             ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGttt                                                                                                           <  2:1031188‑M2/49‑1 (MQ=255)
                                               tttGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                                         >  2:867694‑M1/1‑104 (MQ=255)
                                                 gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTttct                                                                                                        <  2:642685‑M2/52‑1 (MQ=255)
                                                  attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTttcttc                                                                                                      <  2:1054283‑M2/54‑1 (MQ=255)
                                                  attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTttcttc                                                                                                      <  1:259646‑M2/54‑1 (MQ=255)
                                                     gtccttacccTGGATAGCGCAGCAGTGAACGAACACATCATTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACCCGTCGAACCACTTAAggaagatgcgaacaagtccctgatatgagatcatgtttgacatctggacc                                                                                                      >  1:306472‑M1/5‑98 (MQ=255)
                                                      aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGccc                                                                                                  >  2:456267‑M2/94‑151 (MQ=255)
                                                        ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGc                                                                                                >  2:847054‑M2/92‑151 (MQ=255)
                                                            cccTGGAGAGCGGAGAAGTGTACGACCACAGCCTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGACCCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttggcaactggagccaaagaac                                                                                              <  1:489701‑M1/149‑59 (MQ=255)
                                                             ccTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                           >  1:139407‑M1/1‑90 (MQ=255)
                                                                cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATaa                                                                                        <  2:42760‑M2/68‑1 (MQ=255)
                                                                 gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAAc                                                                                       >  1:279633‑M2/83‑151 (MQ=255)
                                                                  ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAAc                                                                                       <  2:423906‑M2/69‑1 (MQ=255)
                                                                    agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATa                                                                                    <  2:659929‑M2/72‑1 (MQ=255)
                                                                         aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATaa                                                                               <  1:793247‑M2/77‑1 (MQ=255)
                                                                           atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATaaaa                                                                             <  2:298251‑M2/79‑1 (MQ=255)
                                                                              ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTg                                                                          >  1:1091141‑M2/70‑151 (MQ=255)
                                                                                 aCGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                                                                       <  1:362277‑M1/151‑82 (MQ=255)
                                                                                   gAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                                                                     >  2:1047492‑M1/1‑68 (MQ=255)
                                                                                    aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACAt                                                                    <  2:969423‑M2/88‑1 (MQ=255)
                                                                                       atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTAc                                                                 >  1:521978‑M2/61‑151 (MQ=255)
                                                                                       atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTAc                                                                 <  1:1030517‑M2/91‑1 (MQ=255)
                                                                                        caTCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                                <  1:694721‑M1/151‑89 (MQ=255)
                                                                                         aTCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                               >  2:101833‑M1/1‑62 (MQ=255)
                                                                                          aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGc                                                              >  2:561107‑M2/58‑151 (MQ=255)
                                                                                             ttGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                             <  2:158268‑M1/149‑92 (MQ=255)
                                                                                             ttGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                               <  2:617465‑M1/147‑90 (MQ=255)
                                                                                             ttGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                               <  2:688972‑M1/147‑90 (MQ=255)
                                                                                              aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATg                                                           >  2:291110‑M2/54‑150 (MQ=255)
                                                                                                 gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAgg                                                        <  1:1055752‑M2/100‑1 (MQ=255)
                                                                                                  gcCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                      >  1:1115773‑M1/1‑53 (MQ=255)
                                                                                                     aTCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga                                                    >  1:61192‑M1/1‑50 (MQ=255)
                                                                                                        aGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                                >  1:745018‑M1/1‑47 (MQ=255)
                                                                                                         gCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                                >  2:1153219‑M1/1‑46 (MQ=255)
                                                                                                               gTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt                                          >  2:148927‑M1/1‑40 (MQ=255)
                                                                                                               agccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCt                                         >  2:368935‑M2/37‑151 (MQ=255)
                                                                                                               agccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCt                                         >  1:712572‑M2/37‑151 (MQ=255)
                                                                                                                 ccgagaagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCg                                       >  2:764486‑M2/35‑151 (MQ=255)
                                                                                                                      aagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCCATATAAGGCTCGGc                                     >  2:101205‑M2/30‑148 (MQ=255)
                                                                                                                      aagaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGc                                     >  1:308073‑M2/30‑148 (MQ=255)
                                                                                                                      aGCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg                                  >  1:340461‑M1/1‑33 (MQ=255)
                                                                                                                       gCCAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                                 >  2:400218‑M1/1‑32 (MQ=255)
                                                                                                                       gCCAAAACCTTTAGACTCGTTGAACCACTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCagag                                 <  2:26634/151‑1 (MQ=255)
                                                                                                                        gaatttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAgaga                                <  1:814763‑M2/124‑1 (MQ=255)
                                                                                                                        ccAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                                <  2:944291‑M1/151‑121 (MQ=255)
                                                                                                                         cAAAACCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca                               <  2:231813‑M1/151‑122 (MQ=255)
                                                                                                                          atttccccgcttattcgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAg                              <  2:747877‑M2/126‑1 (MQ=255)
                                                                                                                          aaaaCCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                                >  2:1141015‑M1/1‑29 (MQ=255)
                                                                                                                           aaaCCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                                >  2:26652‑M1/1‑28 (MQ=255)
                                                                                                                             aCCTTTAGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                           <  1:391733‑M1/151‑126 (MQ=255)
                                                                                                                                   aGACTCGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa                      >  2:731191‑M1/1‑20 (MQ=255)
                                                                                                                                        cGTTGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga                 <  2:831387‑M1/150‑136 (MQ=255)
                                                                                                                                         cgcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATtcaacgtc                >  1:886190‑M2/11‑150 (MQ=255)
                                                                                                                                          ttGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt              >  1:780564‑M1/1‑13 (MQ=255)
                                                                                                                                          ttGAACCACTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATtcaacgtca               >  1:96192/1‑150 (MQ=255)
                                                                                                                                          gcaccttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATtcaacgtca               >  1:76678‑M2/10‑150 (MQ=255)
                                                                                                                                           tGAACCACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt             >  2:530804‑M1/1‑12 (MQ=255)
                                                                                                                                            accttccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATtcaacgtcaacg            <  1:1006647‑M2/144‑1 (MQ=255)
                                                                                                                                                 ccTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGttt       >  2:887483‑M2/3‑151 (MQ=255)
                                                                                                                                                  cTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGttt       >  1:324444‑M2/2‑150 (MQ=255)
                                                                                                                                                   ttAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTAc     >  1:1063162/1‑151 (MQ=255)
                                                                                                                                                    tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg    >  2:870100‑M1/1‑3 (MQ=255)
                                                                                                                                                     aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc   >  1:128899‑M1/1‑2 (MQ=255)
                                                                                                                                                     aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc   <  1:117605‑M1/151‑150 (MQ=255)
                                                                                                                                                     aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc   >  2:960572‑M1/1‑2 (MQ=255)
                                                                                                                                                     aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg    <  2:1152784‑M1/150‑149 (MQ=255)
                                                                                                                                                      aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgca  <  1:282177‑M1/151‑151 (MQ=255)
                                                                                                                                                      aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgca  <  2:978791‑M1/151‑151 (MQ=255)
                                                                                                                                                      aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc   >  2:704415‑M1/1‑1 (MQ=255)
                                                                                                                                                      aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc   >  2:671028‑M1/1‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
TGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCACTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCA  >  NC_000913/1907263‑1907563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.