New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	925901 =	64 (0.960)	6 (0.090) +C	3/296	13.0	10.9%	noncoding (71/88 nt)	serW	tRNA‑Ser
	?	NC_000913	= 1097218	35 (0.520)					intergenic (+389/+347)	ycdU/serX	putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

GCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCG‑AACCCCGGT  >  NC_000913/1097071‑1097306                                                                                                                                                    |                                                                                           gCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGtt                                                                                         >  1:108417/1‑151 (MQ=18)    cACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGAAggggggggt                                                                                          >  1:813663/1‑145 (MQ=16)        gCGTTCACGGTCTGTCCAACTGGCTCTCGCCTGTTATCTACCCCAAGACGGGGGTTCTCGTCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgc                                                                                  <  1:532510/151‑1 (MQ=11)         cGTTCTCGGTCTGTCCATCTGGTTGTCGCCTGTTGTCGACCCCAGGACGGGGCTTCTCATCCCCTCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgct                                                                                 <  1:738690/151‑1 (MQ=11)             cACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcg                                                                              <  2:286521/150‑1 (MQ=33)             cACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGCGGGGGGGGGGTTGAAtc                                                                                    >  2:853789/1‑144 (MQ=255)                       ccACCTGGCTGTCGCCTGTCGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg                                                                   <  1:844470/151‑1 (MQ=16)                           cTGGCTCTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGc                                                                <  2:1022182/150‑1 (MQ=18)                              gcggTCGCCTGTTCCCGGCCCCAAGACGGGGGTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCggg                                                                 <  1:496585/143‑1 (MQ=11)                               ctctCGCCTGTTCCCCACCCCAAGACGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAg                                                              <  1:413218/145‑1 (MQ=11)                                tGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGCGGGGGGGGATGAATCGCTTCGCCCCCCCTGCGGGGCGcccc                                                          >  1:930136/1‑150 (MQ=11)                                   cGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCCCCTCCCCCGCCCTCCCGGGAGccc                                                           >  1:512195/1‑147 (MQ=11)                                         ttGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGAATCGGATCGCCCCCCCTTCGGGGAgggcg                                                          >  1:418382/1‑138 (MQ=11)                                         ttGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGc                                                  <  2:61809/150‑1 (MQ=33)                                         ttGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGAGCGGGGGGGGGTGACCCGCTTCCCTCGCCCTCCCGGCAGCCCGc                                                         >  2:667854/1‑143 (MQ=11)                                          tgccGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTg                                                   <  1:929034/145‑1 (MQ=18)                                               aCCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAGAAAAAGCCCGTTCTCTCGTACGAGCTCTTCTCTAAATATGGCGGTGAGGTGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCAc                                           <  1:67603/150‑1 (MQ=255)                                                 ccccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCAc                                           <  2:447446/148‑1 (MQ=31)                                                   ccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCt                                      <  1:853763/151‑1 (MQ=31)                                                      gTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGGCTCGCTTCCCTCGCCCTGCGGGCGGCCCCCCCCCTGC‑GGTTACgg                                         >  2:470481/1‑145 (MQ=11)                                                      gTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAAGGGGGGGTTGACTCGCTTCCCTCGCCCTCCCGGGCGCCCCCTccacccgttcaagg                                          >  2:635798/1‑132 (MQ=11)                                                           ggCTGCTCGTCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACt                              <  1:698133/151‑1 (MQ=14)                                                                ctcctctcttccgtgtgtGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACt                              <  1:347289/134‑1 (MQ=9)                                                                     ccccccGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACTGGCTGTCGc                     <  2:944650/150‑1 (MQ=31)                                                                      cccccGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGACTCGCTTCGCCCCCCCTCCCGGCAGCCCGCCCACTGC‑GTTTCCGGGCTGTCCCACCGGcctgcgcc                    >  1:289565/1‑143 (MQ=11)                                                                          cGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTg               <  2:86118/151‑1 (MQ=31)                                                                          cGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAATGACTCGCCTCGCTCGCCCCGCGGGCAGCCCGCTCACTGC‑GTTTACGGGCTGTCCAAACGGCTGTCGcccggt                >  2:426191/1‑146 (MQ=11)                                                                            gtgtgtGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTc             <  2:778274/151‑1 (MQ=31)                                                                              gtgtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCg            <  2:762293/150‑1 (MQ=31)                                                                              gtgtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCG‑a          <  1:902256/151‑1 (MQ=31)                                                                                 tgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTTACTCGCTTCTCTCGCCCCCCGGGCAGCCCGCTCCCCGC‑GTTCACGGTCTGTCCCACTGGCTGTCGCCAGCTGTCG‑GAcc       >  2:952169/1‑151 (MQ=11)                                                                                  gCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCGCTTCCCTCGCCCTGCGGGCAGCCCCCCCCCCGCGGTTCCCGG‑CTGTCCAAACGGCTGTCGCCCGGTGTCG‑GAccc      >  2:509260/1‑151 (MQ=11)                                                                                  gCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCG‑AAcc       <  1:847501/150‑1 (MQ=31)                                                                                    aaTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCG‑AACCCCg    <  1:563884/151‑1 (MQ=31)                                                                                     aTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCGCCTCGCTCCCCCCGCGGGGCGCCCGCCCACTTC‑GTTCACGGGCTGTCCAACTTGCTGTCGCCCGTTGTCG‑AAaccc     >  2:664061/1‑149 (MQ=11)                                                                                     aTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGAATCGCCTCCCTCGCCCTTCGGGGAGGCCGGTCGCGGG‑GGTTACGGGCTGTCCCACTGGGTGTCGGCacgttttgaa          >  1:926972/1‑136 (MQ=2)                                                                                      tACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGCGGGGGGGGGGCTTACTCGCCTCGCTCGCCCCGCTGGGAGGCCGCCCACTCC‑GTTTACGGGCTGTTCCACCTGCTGGCGGCCGGTGTTGAAACCCCgg   >  1:908542/1‑151 (MQ=2)                                                                                       acacGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCG‑AACCCCGGt  <  1:820495/150‑1 (MQ=31)                                                                                                                                                    |                                                                                           GCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGC‑GTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCG‑AACCCCGGT  >  NC_000913/1097071‑1097306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.