| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 941,713 | 0 | T | G | 50.6% | 88.1 / 138.7 | 83 | V252G (GTG→GGG) | dmsA | dimethyl sulfoxide reductase, anaerobic, subunit A |
| Reads supporting (aligned to +/- strand): ref base T (6/35); new base G (42/0); total (48/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.46e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.58e-10 | |||||||||||
TACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCGT > NC_000913/941568‑941862 | tactCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGCtt > 2:1042525/1‑151 (MQ=255) actCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACt < 1:422524/149‑1 (MQ=255) actCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTa < 2:397398/151‑1 (MQ=255) tcctccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTa > 1:233787/1‑149 (MQ=255) tcctccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTTCt > 2:664063/1‑151 (MQ=255) tcctccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCATACt > 1:446864/1‑151 (MQ=255) cctccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTAc < 2:14501/149‑1 (MQ=255) cctccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGCTTACt > 2:757403/1‑150 (MQ=255) tccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTa > 1:243693/1‑149 (MQ=255) ccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTAt < 1:747371/149‑1 (MQ=255) cgcgCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTAATTTCtt > 1:697893/1‑151 (MQ=255) gcgcAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTg < 1:1357381/151‑1 (MQ=255) gcAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGaa < 1:1276126/151‑1 (MQ=255) gcAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTTTCtt > 2:416526/1‑148 (MQ=255) aaaTTGCGGAAGGTTTGAACTATCCCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACa < 1:1313000/151‑1 (MQ=255) aaTTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACa < 2:21820/150‑1 (MQ=255) aTTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAgg < 1:885169/151‑1 (MQ=255) tGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGAGGGGGGGCTTACTTTCTTTAACAgg > 1:135485/1‑149 (MQ=255) cGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACg < 2:601672/151‑1 (MQ=255) cGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGCGGGGGGATTTTCTTACTTGAACAggta > 1:230793/1‑147 (MQ=255) gAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGcc < 1:254194/151‑1 (MQ=255) aaGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGGTTACTCTTTTTTACAAGCACGcc > 2:984794/1‑150 (MQ=255) gTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCCGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTAATATCTTTCAAAAGCACGCCAg > 1:498031/1‑149 (MQ=255) tttGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTGAAAAGGGACGcc > 1:152849/1‑146 (MQ=255) cTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGGTTTCTATTTTTTAAAAGCACGCCCGaaaaataa > 2:355937/1‑145 (MQ=255) aCGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGGTTTCTATATTTAAAAAGCAAGCCCGAAATCTAA‑TAccc > 2:476600/1‑147 (MQ=255) ggcggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGATTACTATCTTTAAAAGGCACGCCCGAAAACTTA‑AGCCCGCacg > 2:1314549/1‑148 (MQ=255) gcggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTTTCTTTGACAGGAACTGCCGAAAACTTA‑TGccc > 1:712384/1‑144 (MQ=255) ggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAACAAGGACGCCAGAAATCTAA‑TGGCCGCATGat > 1:1243986/1‑149 (MQ=255) ggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTTCTATTTTGAACAGGCACGCCAGAAATCTAA‑TGccccc > 1:440208/1‑142 (MQ=255) tGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGACTTTCTATTTTGGACAGGCACGCCAGAAAAATAA‑AGCCCGCAAGatcat > 2:573033/1‑149 (MQ=255) gggCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGatcatca < 2:256429/150‑1 (MQ=255) ggCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGatcatcatc < 1:1320403/151‑1 (MQ=255) aGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGAt < 2:422760/151‑1 (MQ=255) aGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGGTTACTATCTTTAAAAGGCACGCCAGAAAACTAA‑TGCCCGCATGatca > 2:529353/1‑143 (MQ=255) gATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATc < 1:644648/151‑1 (MQ=255) gATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAACAGGCATGCCAGAAATCTAA‑TGCCCGCATGATCATCATCTAt > 2:1006469/1‑150 (MQ=255) tGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGGTTACTATTTTTAACAGGCACCCCCGAAAACTAA‑TGCCCGCATGATCATCATCGATcc > 2:1182462/1‑150 (MQ=255) ggCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCcgc < 2:520698/151‑1 (MQ=255) cgaCAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCcgcg < 2:231327/148‑1 (MQ=255) aaCAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTCTTAACTTTGAAACGAACCCCAGAAAACTAA‑AGCCCCCAATatcatcaaccttccctccc > 1:1288835/1‑139 (MQ=255) aCAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTGAAAAGGGACGCCCGAAAACTAA‑TGCCCCCATGATCATCATCGATCCccgc > 1:1447582/1‑149 (MQ=255) aGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATTTTTAACAGGCACGCCAGAAAACTAA‑TGCCCGCCCGATCATCatccatcc > 2:825197/1‑143 (MQ=255) cccGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGGTTACTATTTTGAAAAAGCACGCCCGAAATTTAATTGCCCCCA‑GATAATCATCGAACCCCGCCATAcc > 2:51218/1‑151 (MQ=255) cccGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGATTTATATCTTTAACAAGCACGCCCGAAATATTA‑TAACCCCAAGgtcatcatc > 2:1201301/1‑136 (MQ=255) ggATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGGTTACTATCTTGAAAAAGCACGCCAGAAATATAA‑TGGCCGCCAGATCATCATTGATCCGCGCTATACCGacac > 2:840992/1‑150 (MQ=255) atatCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCgg < 1:757418/151‑1 (MQ=255) atatCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAAAAGGCACGCCCGAAAACTAA‑TTCCCCCATGATCATCATTGATACGCGCTATAACcacaac > 2:4904/1‑147 (MQ=255) atCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGt < 1:1116865/150‑1 (MQ=255) aaCAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGACTTACTATCTTTAACAGGCACGCCAGAAAACTAA‑TGCCCCCATGATCATCATCGATCCGCGCTATACCCACACCCGTGCCggg > 1:95633/1‑150 (MQ=255) aCAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGgcg < 1:526574/151‑1 (MQ=255) aCAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGGTTATTATCTTTAAAAAGCACGCCAGAAAACTAA‑ATCCCCCCTGATCATCATCGATCCGCGCTATAACGCCACCCGTGCCggggg > 2:900645/1‑149 (MQ=255) gTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGCGGGGTGAGTTACTATCTTTAACAGGCACGCCAGAAATCTAA‑TGCCCGCACGATCATCATCGATACGCGCTATACCCGCAAccgggccggg > 2:887488/1‑146 (MQ=255) aaGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGAGTTACTATCTTGAAAAAGGACGCCAGAAAACTAA‑TGCCCGCATGGTCATCAACGGTTCGCGCTATACCGGCACCCGGGCCGGGcgcg > 2:839648/1‑148 (MQ=255) gCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGAt < 1:969856/151‑1 (MQ=255) cTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGGCTTACTATCTTGAACAGGCACCCCAGAAAACTAA‑TGCCCGCATGATCATCATCGATTCGCGCTATACCGACACCGGTGCCGGGcgcg > 2:829083/1‑145 (MQ=255) gTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGa < 1:416533/151‑1 (MQ=255) gTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGCTTACTATCTTTAACAAGCACGCCAGAAAACTAA‑TGCCCGCATGATTATCCTCGAGCCCCGGTCTACCGCCACCCGGGGCGGGCGCGGAGATGAgggg > 2:751162/1‑150 (MQ=255) tGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTCGGGGGAGTTACTATCTTTCACAGGCACCCCTGAAATCCGA‑ATCCCGCCTGCACCTCCTCGGAACCCGCCATACCGGCCCCGGGGCCCGGCGCGAAGAAGAGTggggccc > 2:6435/1‑146 (MQ=255) gTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCt < 1:647969/151‑1 (MQ=255) tttGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGTCTTATTATCTTGAACAGGCACGCCAGAAAACTAA‑TGCCCCCATGAACATAATCGATCCGCGCTATACCGACACCGGGGGCGGGCGCGGAGATGAGGGGATccc > 2:1356958/1‑149 (MQ=255) ggTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTc < 2:1046464/151‑1 (MQ=255) aataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGt < 1:111716/150‑1 (MQ=255) aataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGATTACTTTCTTTAACAGGCACGCCAGAAAAATAA‑TGCCCGCAAGAACATCCTCAATCCGCGCCATACCCACACCCGGGCCGGGGGCGAAGATGAGGGGATccccctt > 1:785475/1‑143 (MQ=255) aaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTTAACAGGGCCGCCCGAAAACTAA‑TGGCCGCCTGATCATCATCGATCCGCGCCATACCGACACCCGTGCCGGGGGCGAAGATGAGGGGGTCCCCATTCTTcccg > 2:736719/1‑149 (MQ=255) ccTGGCGAAACGCGAATGAGTGGCGGCGGGGGGGCTTATTTTCCTTAACAGGGACGCCAGAAAAATAA‑TGCCCGCCCGATTATCATCGATTCGCGCTATAACCCCACCCGGGCCGGGGGCGAAGATGAGGGGATCCCTATTTGTCCgg > 1:410651/1‑148 (MQ=255) ggCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAg < 1:1159764/151‑1 (MQ=255) ggCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTGAAAAGGCACGCCAGAAAACTAA‑AGCCCGCCTGATCATCATCGATCCGCGCTATACCGACACCCGGGCCGGGCGCGGAGATGAGGGGATCCCTATTCGTCCgggga > 2:1368398/1‑146 (MQ=255) gAAACGCGAATGAGTGGCGGTGGGGGGGCTTTCTATCTTTAAAAAGCACGCCAGAAATCTAA‑TGCCCGCATGATCATTATCGATCCGCGCCATAACCCCACCCGGGGCGGGCGCGGAGATGAGTGGGTCCCTATTCGTCCCGGAACa > 2:895347/1‑147 (MQ=255) gAAACGCGAATGAGTGGCGGTGGGGGGGATTTCTATCTTTAACAAGCACCCCAGAAATCTAA‑TGCCCGCATGATCATCCTCGTTCCCCCCTATACCCACCCCCGTGCCGGGCGCGGAGATGAGGGGATCCCCCTTTGTCCCGGGACAGa > 2:968916/1‑149 (MQ=255) aTGAGTGGCGGTGGGGGGGCTTACTATCTTTAACAGGCCCGCCAGAAATCTTA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCCACACCGGGGCCGGGGGCGGAGATGAGTGGGTCCCTATTCGTCCGGGGACAGATGCCGCCCTg > 1:1416243/1‑150 (MQ=255) tGAGTGGCGGTGGGGGGGCTTACTATCTTGAAAAAGCACGCCAGAAATATAA‑TGCCCCCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGGTCCCTATTCGTCCGGGGACAGATGCCGc > 1:808198/1‑145 (MQ=255) gAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGt < 2:1258027/150‑1 (MQ=255) aGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTa < 2:243690/151‑1 (MQ=255) cGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGt > 2:1460225/1‑151 (MQ=255) cGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGt < 2:250544/151‑1 (MQ=255) cGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGt < 1:900105/151‑1 (MQ=255) tGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTg > 2:816721/1‑151 (MQ=255) ggggTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTgg < 1:1042550/151‑1 (MQ=255) ggggTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTgg < 2:233784/151‑1 (MQ=255) ggggTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTg < 2:464738/150‑1 (MQ=255) gggTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGc < 2:1443180/151‑1 (MQ=255) ggTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCg < 1:749630/151‑1 (MQ=255) tGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCGt > 2:49414/1‑150 (MQ=255) tGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCGt > 1:353209/1‑150 (MQ=255) | TACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAA‑TGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCGT > NC_000913/941568‑941862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |