| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,604,344 | 0 | C | T | 47.1% | 55.3 / 45.3 | 69 | S62F (TCT→TTT) | bglJ | bgl operon transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base C (9/27); new base T (32/0); total (42/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.86e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGG > NC_000913/4604198‑4604490 | cATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttttttt > 1:1042730/1‑151 (MQ=255)cATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttctt < 1:88874/149‑1 (MQ=255)cATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttctt < 2:286914/149‑1 (MQ=255)cATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttctt < 1:285886/149‑1 (MQ=255) aTAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CAtttttttttttt > 1:885814/1‑151 (MQ=255) aaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CAtttttttttttttttcc > 2:519165/1‑144 (MQ=255) aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATg > 1:304299/1‑151 (MQ=255) gCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATgag < 1:798748/151‑1 (MQ=255) gCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATgag < 2:526184/151‑1 (MQ=255) gCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATgag < 2:618392/151‑1 (MQ=255) gTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGcc > 2:167271/1‑144 (MQ=255) gTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTTTGCCATgag > 2:47362/1‑149 (MQ=255) cATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGt < 1:10745/151‑1 (MQ=255) aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGTg > 1:443931/1‑151 (MQ=255) agtagtATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAgc < 2:643116/151‑1 (MQ=255) tagtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATGGGAAGGGAg > 1:632949/1‑148 (MQ=255) tagtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCCTGAGGAGTGAgcg > 2:462506/1‑150 (MQ=255) agtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAgcgc < 2:974668/150‑1 (MQ=255) agtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCa < 2:445186/151‑1 (MQ=255) tCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGGGAggggcg > 1:1069372/1‑143 (MQ=255) ggTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGTCCTGAGAAGGGAGGGCCGAgggg > 2:665153/1‑151 (MQ=255) tATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTACATTTTTT‑TTTTTTTGCCCTGTGTAATGAGCCGCGAGAggg > 2:62494/1‑150 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGa < 2:32831/150‑1 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGAt < 2:363438/151‑1 (MQ=255) ttGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCCTGAGAAGGGAGCGCAGGGGGGGGtt > 2:1102922/1‑151 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTAt < 2:659308/151‑1 (MQ=255) agagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTTCCTGAGAAGTGAGGGCAGAGAGGGGTTAt > 2:797450/1‑150 (MQ=255) gTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGGAGAGAGGGATTAtttt > 2:240708/1‑150 (MQ=255) tCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CCTTTTTTTTTTTTTTGCCATGAGGAGGGAGGGCAGGGAGGGGTTTTCTTTCct > 1:686331/1‑148 (MQ=255) cAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCAGAGAGGGGTTTTCTTTCctgact > 1:684189/1‑151 (MQ=255) gAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCCTGAGAAGGGAGCGCAGGGAGGGATTATTTTGCcttac > 2:210658/1‑148 (MQ=255) aaaGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGaa < 1:683924/151‑1 (MQ=255) aaGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGTGAGGGCAGAGAGGGATTATCTTGCCTGACTGaa > 1:250982/1‑150 (MQ=255) gTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGGGGGGGCAGGGGGGGGTTATCTTTCCTGTCTGAAC‑Tg > 2:590106/1‑151 (MQ=255) tGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CCTTTTTTCTTTTTCTGCCATGAGGAATGTGCGCAGAGAGGGGTTATTTTGGCTGactggac‑tgg > 1:120175/1‑149 (MQ=255) gCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTTCCATGAGAAGTGAGCGCCGAGAGGGGTTATCTTGCCTGACTGAAC‑TGGCg > 1:535806/1‑150 (MQ=255) gCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGa < 1:1084376/151‑1 (MQ=255) cGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTTCCTGACTGAAC‑TGGCg > 1:786674/1‑149 (MQ=255) aCCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAAC‑TGGGGA‑TTAAGtt > 2:735942/1‑151 (MQ=255) cTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTCTTCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGttt > 2:61952/1‑149 (MQ=255) tataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑Ccg < 2:168865/150‑1 (MQ=255) ataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑Ccgc < 1:776463/150‑1 (MQ=255) aGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCCGAGAGGGGTTATCTTTCCTGACTGAAC‑TGGCGA‑TTAAATTT‑TCGCGTAc > 2:167472/1‑151 (MQ=255) aGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCCTGAGGAGTGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑TCGCGt > 1:1033019/1‑149 (MQ=255) ccATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CCTTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGGGGGGGGTTATCTTGCCTTACTGAAC‑TGGCGA‑TTAAGTTT‑TCGCGTAccc > 2:1033857/1‑149 (MQ=255) aTACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCg < 2:526561/151‑1 (MQ=255) tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCCTGAGAAGGGGGCGCAGAGAGGGGTTTTTTTGCCTGACCGAAC‑TGGGGATTTAAGTTT‑‑CGCGTGccccg > 1:566638/1‑146 (MQ=255) cAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CCTTTTTTCTTTTTTTGTCATGTGAAGGGAGCGCAGAGGGGGGCTATCTTGGCCGACTTAACTTGGCCG‑TT‑AGTTT‑ACGCGTGCCCGGCGTTTAGTtttt > 1:845864/1‑151 (MQ=255) aGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTTCCATGAGAAGGGAGCGCCGAGAGGGGTTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑TCGCGTACCCCGCGTTTAGTTATTGCgg > 1:430775/1‑150 (MQ=255) aGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGga < 2:1022018/151‑1 (MQ=255) gTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGAGAGGGGTTATTTTTCCTTACTGAAC‑TGGCGA‑TTAAGTTTCCCCCGAACCCGGGGTTTTGTtttttggg > 2:767961/1‑143 (MQ=255) gTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGgatgat < 1:400872/151‑1 (MQ=255) aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CCTTTTTTTTTTTTTTGCCATTGGAAGTGAGCGGGGAGGGGGGTTATCTTGCCTGCCTGGAA‑TGGGGA‑TTTAATTT‑TCGCGGACCAGGGGTTTGGTtttt > 2:278566/1‑139 (MQ=255) aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCCTTAGAAGTGAGCGCAGAGGGGGGTTATCTTGCCTGACTGAAC‑TGGCGG‑TTAAGTTT‑TCGCGTACCCCGCGGTTTGTTATTTCgg > 2:124028/1‑143 (MQ=255) aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGATTATTTTGCCTGACTGGAC‑TGGGGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGggtggtg > 1:87878/1‑149 (MQ=255) cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CCTTTTTTTTTTTTCTGCCATTAGAAGGGAGGGCAGAGAGGGGTTATCTTGCCTGACTGAAC‑TGGCGA‑TTTAGTTT‑CCCCGTACCCGGCGTTTAGTTTTTGCGGGTGATGATAtt > 1:659119/1‑150 (MQ=255) ggATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGaa < 1:1072669/151‑1 (MQ=255) gATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CCTTTTTTTTTTTTTTGCCCTGAGAAAGGGGCGCCGAGGGGGGGTATCTTTGCTGACTGAAA‑TGGCGG‑TTAAGTTT‑TCCCGTACCCCGCGTTTTGTTATTGCGGGTGATGGTAtt > 2:1081166/1‑147 (MQ=255) aTGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGGGAAGGGAGGGCAGGGGGGGGTTATCTTTCCTGACTGAAA‑TGGCGG‑TTAAGTTT‑CCGCGTACCCCGCGTTTAGTTATTGCGGGTGATGATATTGaa > 1:1039386/1‑149 (MQ=255) gTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCt < 2:932790/150‑1 (MQ=255) gTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATAATGAAGCTCGGCt < 1:400290/150‑1 (MQ=255) cgcgGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCCTGAGAAGGGGGGGCCGGGGGGGGTTTTTTTTGCTTACTTAAA‑CGGCGG‑TTTAATTT‑TCGCGTACCCGGCGGTTTTGTATTGCGGGTGGTGGTATTTAAGCTCgg > 2:832433/1‑146 (MQ=255) cgcgGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGTTTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGAt < 1:184340/151‑1 (MQ=255) cgcgGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGa < 2:220935/150‑1 (MQ=255) cgGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTg < 2:537326/151‑1 (MQ=255) tctcGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCCTGAGAAGTGAGCGCAGAGGGGGGTTATCTTTCCTGACTGAAC‑TGGGGA‑TTAAGTTT‑TCGCGTACCCGGCGTTTTGTTATTTCGGATGATGGTATTGAAGCTCGGCTggttggtt > 2:969895/1‑150 (MQ=255) cGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCAt < 1:580739/150‑1 (MQ=255) tttGCGGCGGT‑CATTTTTTTTTTTTTTTCCCTGAGAAGTGAGCGCGGGGGGGGGTTTTTTTGTCTGACTTTAA‑TGGGGG‑TTAAGGTT‑CCGCGTACCCCGCGTTTTGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCAtttt > 2:1003827/1‑149 (MQ=255) ttGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAATTTT‑CCGCGTACCCGGCGTTTATTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGt < 2:488810/150‑1 (MQ=255) tGCGGCGGT‑CATTTTTTCTTTTTTTGCCCTGAGAAGTGAGCGCAGAGAGGGGTTATCTTTCCTTACTGAAC‑TGGCGG‑TTTAGTTT‑TCGCGTAACCGGCGTTTAGTTTTTGCGGGTGATGATATTTAAGGTCGGCTGATTTGTTTAtttt > 2:269814/1‑147 (MQ=255) gcggcgGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGc < 1:234904/151‑1 (MQ=255) gcggT‑TATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGAATGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTGCCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt < 2:1042693/151‑1 (MQ=255) cggT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCTGCGGTTAGTTATTGCGGATGATGATATTGAAGCGCGGCTGATTGGTTCATTGGCGCCa > 2:6139/1‑149 (MQ=255) ggT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATc > 2:867247/1‑150 (MQ=255) gT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCAc > 2:1008082/1‑151 (MQ=255) ttttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTgg > 2:306285/1‑151 (MQ=255) | CATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAC‑TGGCGA‑TTAAGTTT‑CCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGG > NC_000913/4604198‑4604490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |