Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,197,154	Δ12 bp	coding (2477‑2488/2841 nt)	glnE ←	fused deadenylyltransferase/adenylyltransferase for glutamine synthetase

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3197154	3197165	12	98 [0]	[1] 99	glnE	fused deadenylyltransferase/adenylyltransferase for glutamine synthetase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3197153	0 (0.000)	92 (0.970)	76/280	0.3	100%	coding (2489/2841 nt)	glnE	fused deadenylyltransferase/adenylyltransferase for glutamine synthetase
	?	NC_000913	3197166 =	0 (0.000)					coding (2476/2841 nt)	glnE	fused deadenylyltransferase/adenylyltransferase for glutamine synthetase

ACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTTCCCACGT  >  NC_000913/3197003‑3197301                                                                                                                                                       |                                                                                                                                                     aCGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTT                                                                                                                                                      >  1:720808‑M1/1‑151 (MQ=255)   gTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcc                                                                                                                                                    >  1:1336909‑M1/1‑149 (MQ=255)           aCCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttc                                                                                                                                            <  1:399357‑M1/151‑11 (MQ=255)               gcgcGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGTTATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtt                                                                                                                                        >  1:1066794‑M1/1‑137 (MQ=255)               gcgcGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtt                                                                                                                                        >  2:445208‑M1/1‑137 (MQ=255)               gcgcGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtt                                                                                                                                        <  1:1122143‑M1/151‑15 (MQ=255)               gcgcGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtt                                                                                                                                        <  2:224431‑M1/151‑15 (MQ=255)               gcgcGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtt                                                                                                                                        <  1:320266‑M1/151‑15 (MQ=255)                cgcgTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgttt                                                                                                                                       <  2:778640‑M1/151‑16 (MQ=255)                   gTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgca                                                                                                                                    <  2:364401‑M1/151‑19 (MQ=255)                   gTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgc                                                                                                                                     >  2:680455‑M1/1‑133 (MQ=255)                   gTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgc                                                                                                                                     >  1:314788‑M1/1‑133 (MQ=255)                           cGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagtttta                                                                                                                            <  1:1396256‑M1/151‑27 (MQ=255)                           cGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagtttt                                                                                                                             <  1:544735‑M1/150‑26 (MQ=255)                           cGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagtttt                                                                                                                             >  1:484521‑M1/1‑125 (MQ=255)                            ggTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttac                                                                                                                           >  1:563928‑M1/1‑124 (MQ=255)                            ggTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttac                                                                                                                           >  2:1302804‑M1/1‑124 (MQ=255)                             gTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttacc                                                                                                                          >  2:818095‑M1/1‑123 (MQ=255)                               ttttCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttacctt                                                                                                                        >  1:696386‑M1/1‑121 (MQ=255)                                tttCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttacctt                                                                                                                        <  1:230231‑M1/150‑31 (MQ=255)                                  tCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcac                                                                                                                     >  2:756379‑M1/1‑118 (MQ=255)                                   cATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacg                                                                                                                    <  2:155849‑M1/151‑35 (MQ=255)                                   cATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacg                                                                                                                    <  1:513154‑M1/151‑35 (MQ=255)                                   cATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcac                                                                                                                     <  2:366725‑M1/150‑34 (MQ=255)                                    aTGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacg                                                                                                                    <  2:1073320‑M1/150‑35 (MQ=255)                                    aTGAGCGTAGCGCAACACCAGACATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgc                                                                                                                   >  1:1475986‑M1/1‑116 (MQ=255)                                     tGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcg                                                                                                                  >  1:721989‑M1/1‑115 (MQ=255)                                     tGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgc                                                                                                                   >  1:110295‑M1/1‑115 (MQ=255)                                              cgcAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtc                                                                                                          >  2:1156761‑M1/1‑106 (MQ=255)                                               gcAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGGATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtca                                                                                                         <  2:286459‑M1/150‑46 (MQ=255)                                                cAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcat                                                                                                        >  2:37917‑M1/1‑104 (MQ=255)                                                  acacCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataat                                                                                                     >  2:1190549‑M1/1‑102 (MQ=255)                                                  acacCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataat                                                                                                     >  1:728549‑M1/1‑102 (MQ=255)                                                     ccAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctc                                                                                                  <  2:463741‑M1/151‑53 (MQ=255)                                                       aGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgc                                                                                                <  2:1533234‑M1/151‑55 (MQ=255)                                                         atatTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcg                                                                                               >  1:1438592‑M1/1‑95 (MQ=255)                                                              gggTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcac                                                                                         >  2:579296‑M1/1‑90 (MQ=255)                                                              gggTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcac                                                                                         >  2:1024870‑M1/1‑90 (MQ=255)                                                                   ataaATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgt                                                                                    >  2:573982‑M1/1‑85 (MQ=255)                                                                    taaATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtc                                                                                   >  2:603671‑M1/1‑84 (MQ=255)                                                                    taaATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtc                                                                                   >  1:1009766‑M1/1‑84 (MQ=255)                                                                     aaaTTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtc                                                                                   >  1:84869‑M1/1‑83 (MQ=255)                                                                      aaTTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGATCGCGCATTTcccgcacttccgtttgcagagttttaccttcactcggcagcgtcataatctcgcgacgcactgcgtca                                                                                  <  1:1435825‑M1/150‑69 (MQ=255)                                                                      aaTTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtca                                                                                  >  2:816496‑M1/1‑82 (MQ=255)                                                                       aTTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaa                                                                                <  2:593708‑M1/151‑71 (MQ=255)                                                                        ttCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaa                                                                                 >  1:1062575‑M1/1‑80 (MQ=255)                                                                          cGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcgcgcggcagcgtcataatctcgcgacgcactgcgtcaaagtg                                                                             >  2:208908‑M1/1‑78 (MQ=255)                                                                          cGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaag                                                                               >  1:707365‑M1/1‑78 (MQ=255)                                                                            atatCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcg                                                                           <  2:457707‑M1/151‑76 (MQ=255)                                                                              atCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgc                                                                          <  1:273630‑M1/150‑77 (MQ=255)                                                                                cGGTAATTCCCCCTTCATCATCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgactcactgcgtcaaagtgcgcggt                                                                       >  1:868190‑M1/1‑72 (MQ=255)                                                                                cGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggt                                                                       >  2:203967‑M1/1‑72 (MQ=255)                                                                                 ggTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtg                                                                      >  2:1152552‑M1/1‑71 (MQ=255)                                                                                 ggTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtg                                                                      >  2:379875‑M1/1‑71 (MQ=255)                                                                                 ggTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcgg                                                                        <  2:723291‑M1/149‑79 (MQ=255)                                                                                     aTTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagct                                                                  <  2:316005‑M1/151‑85 (MQ=255)                                                                                     aTTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagct                                                                  >  2:715493‑M1/1‑67 (MQ=255)                                                                                      ttCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctg                                                                 >  1:851410‑M1/1‑66 (MQ=255)                                                                                       tCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgc                                                                >  2:1070684‑M1/1‑65 (MQ=255)                                                                                         ccccTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcgg                                                              >  1:631374‑M1/1‑63 (MQ=255)                                                                                          cccTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcgga                                                             <  1:7102‑M1/151‑90 (MQ=255)                                                                                              tcatcaGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatc                                                           <  2:230856‑M1/149‑92 (MQ=255)                                                                                               catcaGCTTTGATATCAAAGCGATCGCGATGTTTATTGCGGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccctcacgcggcagcgtcataatctcgcgacgcacggcgtcaaagtgcgcggtgagctgcggatc                                                           <  1:480740‑M1/148‑92 (MQ=255)                                                                                               catcaGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgcc                                                        >  2:1317302‑M1/1‑57 (MQ=255)                                                                                                      tttGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacact                                                 >  1:402419‑M1/1‑50 (MQ=255)                                                                                                       ttGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacact                                                 <  2:1141535‑M1/150‑102 (MQ=255)                                                                                                          atatCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacac                                             <  1:1452045‑M1/151‑106 (MQ=255)                                                                                                          atatCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacac                                             >  1:1338532‑M1/1‑46 (MQ=255)                                                                                                           tatCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacg                                            >  2:1044968‑M1/1‑45 (MQ=255)                                                                                                             tCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcg                                          >  1:670914‑M1/1‑43 (MQ=255)                                                                                                              cAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgc                                         >  2:51689‑M1/1‑42 (MQ=255)                                                                                                              cAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgc                                         <  1:756336‑M1/151‑110 (MQ=255)                                                                                                               aaaGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgca                                        <  2:915406‑M1/151‑111 (MQ=255)                                                                                                                 aGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacg                                      >  2:193027‑M1/1‑39 (MQ=255)                                                                                                                 aGCCATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacg                                      >  1:430528‑M1/1‑39 (MQ=255)                                                                                                                  gCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgc                                     <  2:421121‑M1/151‑114 (MQ=255)                                                                                                                    gATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcac                                   <  1:1201553‑M1/151‑116 (MQ=255)                                                                                                                       cgcgATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcacca                                 <  2:478478‑M1/150‑118 (MQ=255)                                                                                                                        gcgATGTTTATTGCCGAGATGAGCGCGCATTTcctgcacttacgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccag                                >  1:392157‑M1/1‑32 (MQ=255)                                                                                                                         cgATGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcg                              >  1:826630‑M1/1‑31 (MQ=255)                                                                                                                           aTGTTTATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcc                            >  2:167019‑M1/1‑29 (MQ=255)                                                                                                                                tATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatg                       >  2:1080291‑M1/1‑24 (MQ=255)                                                                                                                                tATTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgat                        <  2:913901‑M1/150‑127 (MQ=255)                                                                                                                                 aTTGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatg                       <  1:708045‑M1/150‑128 (MQ=255)                                                                                                                                   tGCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttc                    >  2:857772‑M1/1‑21 (MQ=255)                                                                                                                                    gCCGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataagctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttcc                   <  1:1308675‑M1/151‑132 (MQ=255)                                                                                                                                      cGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttccca                 <  2:796001‑M1/151‑134 (MQ=255)                                                                                                                                      cGAGATGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttccc                  >  1:1192597‑M1/1‑18 (MQ=255)                                                                                                                                       gagaTGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttcccac                <  1:1384975‑M1/151‑135 (MQ=255)                                                                                                                                        agaTGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttcccacg               <  2:191172‑M1/151‑136 (MQ=255)                                                                                                                                         gaTGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttcccacgt              <  2:136945‑M1/151‑137 (MQ=255)                                                                                                                                          aTGAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttcccacgtc             <  1:1225946‑M1/151‑138 (MQ=255)                                                                                                                                            gAGCGCGCATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttcccacgtcc            >  2:401289‑M1/1‑12 (MQ=255)                                                                                                                                                gcgcATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtactctacacgcgcacgcaccagcgcctgatgttcccacgtccaggcc       >  2:539538‑M1/1‑8 (MQ=255)                                                                                                                                                gcgcATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttcccacgtccaggcc       <  1:594474‑M1/151‑144 (MQ=255)                                                                                                                                                gcgcATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttcccacgtccaggcc       <  2:563967‑M1/151‑144 (MQ=255)                                                                                                                                                   cATTTcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttcccacgtccaggcctcg    >  2:1084672‑M1/1‑5 (MQ=255)                                                                                                                                                      ttcccgcacttccgtttgcagagttttaccttcacgcggcagcgtcataatctcgcgacgcactgcgtcaaagtgcgcggtgagctgcggatcgccgtacactacacgcgcacgcaccagcgcctgatgttcccacgtccaggcctcgtt  <  2:314816‑M1/150‑149 (MQ=255)                                                                                                                                                       |                                                                                                                                                     ACGTTGTCTGACCAGCGCGTTAACTTCGGTTTTTCATGAGCGTAGCGCAACACCAGATATTGGGTAATAAATTCGATATCGGTAATTCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTTCCCACGT  >  NC_000913/3197003‑3197301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑