Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091329,4960TA45.8% 109.8 / 70.9 96intergenic (+301/‑155)dapB/carAdihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
Reads supporting (aligned to +/- strand):  ref base T (43/9);  new base A (0/44);  total (43/53)
Fisher's exact test for biased strand distribution p-value = 1.74e-18
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 103 total aligned reads displayed.

TTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAGG  >  NC_000913/29346‑29645
                                                                                                                                                       |                                                                                                                                                     
tttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAatat                                                                                                                                                       >  2:411379/1‑151 (MQ=255)
  cgaTGTAAATTTTGACCATTTGGTCCGCTTTATTCTGCTCGTTTTTATTTAATACAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGCCGCTTAATGCCTGTAAAACATGCA‑TGAGCCCCAAAATAAtata                                                                                                                                                      >  1:205068/3‑150 (MQ=255)
      gTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATaaaaa                                                                                                                                                  <  2:494815/150‑1 (MQ=255)
        aaaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAAt                                                                                                                                                <  1:451872/150‑1 (MQ=255)
        aaaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATc                                                                                                                                               <  2:1377994/151‑1 (MQ=255)
         aaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATcc                                                                                                                                              <  1:862236/151‑1 (MQ=255)
          aTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATccc                                                                                                                                             >  2:1501051/1‑151 (MQ=255)
               gACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCa                                                                                                                                         <  2:957550/150‑1 (MQ=255)
               gACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCa                                                                                                                                         <  2:764727/150‑1 (MQ=255)
               gACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCAt                                                                                                                                        >  1:672376/1‑151 (MQ=255)
               gACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTAATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCAt                                                                                                                                        >  1:1239636/1‑151 (MQ=255)
                 ccATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCAtt                                                                                                                                       >  2:296671/1‑150 (MQ=255)
                     ttGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGtt                                                                                                                                  >  2:935174/1‑151 (MQ=255)
                        gTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGa                                                                                                                                >  2:1385316/1‑150 (MQ=255)
                               tttttCTCCTCTTTTTTATTTCATAAAATCTTCTTGCTGCGAAAGCTTTTCACAAAAGGGTTTAGATGATTTTTTTTTCGTTTAAGGTCTTAAAAACATGAA‑GGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAg                                                                                                                         <  1:1079855/150‑1 (MQ=255)
                                 tttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAgcgc                                                                                                                      >  2:892240/1‑151 (MQ=255)
                                      gCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                                  >  1:1031906/1‑150 (MQ=255)
                                           tttttATTTCATGCATTCTTCTTGCTGCGAACGCTTTTTCCAGAACAGTTTAAATAATTTTTTTGTCGTTAAATCCCTAAAAAACATGCA‑TGCGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                                             <  1:1139136/150‑1 (MQ=255)
                                            ttttATTTCAAGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAACACATGAA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                                             >  1:359112/1‑149 (MQ=255)
                                               tttttCATGCATTCTTTTTGCTGCGAAAGCGTTTTCCAGAAGGGGTTAGATGTTTTTTTGGTCGTTAAAGGCTTGAAAAACAGGCA‑TGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGa                                                                                                         <  1:1318244/148‑1 (MQ=255)
                                                aTTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                                       >  2:1427660/1‑151 (MQ=255)
                                                aTTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                                       >  1:1337410/1‑151 (MQ=255)
                                                  ttCATGCAATCTTCTTGCTGCGCAAGCTTTTCCCAAAACAGGTTAGATGATTTTTTTGTCGTTTAATGCTTGTAAAACATGCA‑TGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATg                                                                                                      <  2:776217/150‑1 (MQ=255)
                                                  ttCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgc                                                                                                     >  2:1561869/1‑151 (MQ=255)
                                                  ttCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgc                                                                                                     >  1:1493989/1‑151 (MQ=255)
                                                  ttCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgc                                                                                                     >  2:1199185/1‑151 (MQ=255)
                                                   tCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCTTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgcc                                                                                                    >  2:1544834/1‑151 (MQ=255)
                                                       gCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGccgccg                                                                                                >  2:261038/1‑151 (MQ=255)
                                                        cAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGt                                                                                               >  2:924706/1‑151 (MQ=255)
                                                         attcttctTGCTGCGCAAGCTTTTTCCAGAACAGTTTAGATGATTTTTTTGTCGCTTAATGCTTAAAAAACATGCA‑TGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccgcc                                                                                                 <  2:879426/146‑1 (MQ=255)
                                                           tcttctTCCTGCGCAAGCTTTTCCCAAAACAGGTAAAATTATTTTTTTTTCGTTTAATCCCTGAAAAACATGCA‑TGACCCACAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGttt                                                                                             <  1:1500905/150‑1 (MQ=255)
                                                              tcttGCTGCGAAAGCTTTTTCCAGAACAGGTTAGATGATTTTTTTGTCGTTTAATGCTTGAAAAACATGCA‑TGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGttt                                                                                             <  2:873427/147‑1 (MQ=255)
                                                                ttGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                          >  2:1143731/1‑148 (MQ=255)
                                                                    tgcGCAAGCTTTTTCCAAAACAGGTTAAATGATTTTTTTGTCGCTTAATGCTTTAAAAACATGCA‑TGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGa                                                                                       <  2:649228/147‑1 (MQ=255)
                                                                     gcgcACGCTTTTTCCAGAACAGTTTAGATTATTTTTTTTTCCTTTAATCCCTTAAAAACATGCA‑TGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAAtt                                                                                   <  1:1029864/150‑1 (MQ=255)
                                                                      cgcAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtc                                                                                  >  1:915448/1‑150 (MQ=255)
                                                                         aggttttttCCAGAACAGGTTAGATGATTTTTTTGTCGTTTAATGCTTGAAAAACATGCA‑TGAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtc                                                                               <  2:66868/145‑1 (MQ=255)
                                                                              ttttCAAAAACAGTTTAGATGTTTTTTTTGTCGTTTAATCCCTAAAAAACATGCA‑TGACCAAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGaaa                                                                                     <  1:1099301/139‑1 (MQ=255)
                                                                              tttaCCAGAAAAGGTTAAATTATTTTTTGATCATTTAATGCCTGAAAAACATGTA‑CGAAAAAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtc                                                                               <  2:534950/145‑1 (MQ=255)
                                                                                   cAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                                        >  2:105076/1‑147 (MQ=255)
                                                                                    aaaaCAGTTTAGATGTTTTTTTTGCCTTTTAATGCCTAAAAAACATGCT‑GGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAtt                                                                   <  1:1188215/149‑1 (MQ=255)
                                                                                      aaCGGGTTAGATTTTTTTTTTGTCGTTAAATGCTGGAAAAACATGCA‑TGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAttt                                                                  <  2:1226953/150‑1 (MQ=255)
                                                                                      aaCAGGTTAGATGATTTTTTTGTCGCTAAATGCCTGAAAAACATGCA‑TGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAttt                                                                  <  2:239552/150‑1 (MQ=255)
                                                                                      aaCAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                                 >  2:610175/1‑151 (MQ=255)
                                                                                          ggTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                             >  2:38893/1‑151 (MQ=255)
                                                                                            tgaGATGATTTTTTTTGCCCTTAATGCCTAAAAAACTTGAA‑TGACCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                             <  2:1432007/147‑1 (MQ=255)
                                                                                            taaGATGTTTTTTTTGTCGCTTAATGCTTAAAAAACATCCA‑TGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTg                                                            <  2:632446/148‑1 (MQ=255)
                                                                                              agatttttttttttTCTTTTAATGCCTAAAAAACATGCA‑TGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGa                                                           <  1:231701/141‑1 (MQ=255)
                                                                                              aGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAtt                                                         >  2:1220838/1‑151 (MQ=255)
                                                                                              aGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAtt                                                         >  2:271268/1‑151 (MQ=255)
                                                                                                    tttttttGTCGTTAAATGCCTAAAAAACATGAA‑TGAGCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAtt                                                         <  2:31466/143‑1 (MQ=255)
                                                                                                      tttttGTCGTTTAATGCTTAAAAAACATGCA‑TGACCCAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                                   <  2:809285/149‑1 (MQ=255)
                                                                                                      tttttGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcat                                                 >  2:1287093/1‑151 (MQ=255)
                                                                                                      tttttGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcat                                                 >  2:210055/1‑151 (MQ=255)
                                                                                                      tttttGTCGCTAAATGCCTGAAAAACATGTG‑GAAGCCAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                                   <  2:532575/149‑1 (MQ=255)
                                                                                                       ttttGTCGCTTAATGCCTTAAAAACATCAA‑TGACCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcat                                                 <  1:1183053/150‑1 (MQ=255)
                                                                                                        tttGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatc                                                >  1:1018274/1‑150 (MQ=255)
                                                                                                          ttttctttAATTCCCGGAAAAAAAGCATTGCGCCAAAAAATAATATAAAAACTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatca                                               <  1:1491819/144‑1 (MQ=255)
                                                                                                          tGTCGTTTAATGCTTGAAAAACATGCA‑TGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTcatcat                                              <  2:1496219/150‑1 (MQ=255)
                                                                                                          tGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTcatcat                                              >  1:489921/1‑150 (MQ=255)
                                                                                                            tCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgt                                           >  2:1054954/1‑151 (MQ=255)
                                                                                                             cGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgtg                                          >  2:472129/1‑151 (MQ=255)
                                                                                                              gCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgtg                                          >  1:221481/1‑150 (MQ=255)
                                                                                                                ttaagccgggaaaaaCATGTA‑TGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgt                                           <  2:1536520/136‑1 (MQ=255)
                                                                                                                ttAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAt                                       >  2:1291566/1‑151 (MQ=255)
                                                                                                                ttAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAt                                       >  1:1061586/1‑151 (MQ=255)
                                                                                                                  aaTGCCTGAAAAACATGCA‑TGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAtt                                      <  2:185531/150‑1 (MQ=255)
                                                                                                                  aaTGCCTAAAAACCATGCA‑TGACCAAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAtt                                      <  1:935072/150‑1 (MQ=255)
                                                                                                                  aaTCCCTGAAAAACATGAA‑GGACCAAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAtt                                      <  2:845327/150‑1 (MQ=255)
                                                                                                                   aTGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTa                                     >  2:906450/1‑150 (MQ=255)
                                                                                                                     gCCTGAAAAACATGCA‑TGAGCCAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAat                                   <  2:187047/150‑1 (MQ=255)
                                                                                                                      cctaaaaaaCATGCA‑TGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAat                                   <  1:1517380/144‑1 (MQ=255)
                                                                                                                        tgaaaaaCATGCA‑TGGCCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAatat                                 <  2:1520576/146‑1 (MQ=255)
                                                                                                                         gaaaaaCATGCA‑TGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATg                                <  2:231083/147‑1 (MQ=255)
                                                                                                                           aaaaCATGCA‑TGACCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCa                              <  1:1544684/149‑1 (MQ=255)
                                                                                                                            aaaacttgatttgtccAAAAAATAATAAAAAAATTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAatat                                 <  1:1113689/132‑1 (MQ=255)
                                                                                                                             aaCATGCA‑TGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATa                          <  1:427574/151‑1 (MQ=255)
                                                                                                                             aaCATGAA‑TGACCCAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATa                          <  2:886631/151‑1 (MQ=255)
                                                                                                                               catgca‑tgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGAGAATTAATATGCAAATaa                         >  1:751546/1‑150 (MQ=255)
                                                                                                                                atgca‑tgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa                         >  1:1547636/1‑149 (MQ=255)
                                                                                                                                 tgaa‑tgACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaaa                        <  2:1380203/146‑1 (MQ=255)
                                                                                                                                  tgaaggcgCCAAAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa                         <  2:613650/141‑1 (MQ=255)
                                                                                                                                   ca‑tgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtg                     >  1:1540338/1‑150 (MQ=255)
                                                                                                                                      tgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagt                  >  2:787827/1‑151 (MQ=255)
                                                                                                                                       gacccAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAag                       <  2:1301869/142‑1 (MQ=255)
                                                                                                                                          caaaaaaaaaaaaaaaaaaaTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAat              <  2:1011505/147‑1 (MQ=255)
                                                                                                                                           cacaAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAat              >  1:124951/1‑150 (MQ=255)
                                                                                                                                           caaaaaaTAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagtg                 <  2:145443/144‑1 (MQ=255)
                                                                                                                                            acaAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAata             <  1:565293/150‑1 (MQ=255)
                                                                                                                                            aaaaaaaaaaaaaaaaaaCCCCGCCACTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAata             <  2:30989/148‑1 (MQ=255)
                                                                                                                                            aaaaaaaaATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAatat            <  2:249161/149‑1 (MQ=255)
                                                                                                                                              aaaaaaaaaaaaaaaaCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATAtt           <  1:845773/150‑1 (MQ=255)
                                                                                                                                               aaaTAATATAAAAAATCCCGCCATTAAAGTTACTTTTAGCGCCCATATTTCCAAAAAGCCGCCGTTTGCCAAAAATTTCTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGGAAATAAAGTGAGTGAATAtt           >  1:705206/1‑149 (MQ=255)
                                                                                                                                               aaaTAATAAAAAAACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGaa               <  2:1543299/145‑1 (MQ=255)
                                                                                                                                                aataatATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtctc        >  2:1424990/1‑151 (MQ=255)
                                                                                                                                                aataatATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtctc        >  1:450563/1‑151 (MQ=255)
                                                                                                                                                 aaaataAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTctct       <  2:604778/149‑1 (MQ=255)
                                                                                                                                                   aataAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg     <  1:538368/151‑1 (MQ=255)
                                                                                                                                                      ataAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAgg  >  1:744477/1‑151 (MQ=255)
                                                                                                                                                      ataAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAgg  >  2:1330772/1‑151 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
TTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAGG  >  NC_000913/29346‑29645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑