Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,443,277 | 0 | A | C | 46.6% | 102.6 / 28.4 | 74 | V274G (GTA→GGA) | secY | preprotein translocase membrane subunit |
Reads supporting (aligned to +/- strand): ref base A (34/5); new base C (0/34); total (34/40) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.34e-15 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAAATACTAATACT > NC_000913/3443130‑3443426 | gACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑Accc < 1:503591/151‑1 (MQ=255) aCGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑Acccc < 1:766611/151‑1 (MQ=255) gCATAGAGTAACACATAAAGCGGTTGCCCAGGCTTCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCg < 1:176981/151‑1 (MQ=255) cATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGc > 2:1023260/1‑151 (MQ=255) cATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGc < 2:898702/151‑1 (MQ=255) aTAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGcc < 1:368298/151‑1 (MQ=255) agagTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCat > 2:348151/1‑151 (MQ=255) gagTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCat > 2:1279952/1‑150 (MQ=255) agTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCatat > 1:517254/1‑151 (MQ=255) cacaTAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACt > 1:1138793/1‑151 (MQ=255) caTAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACttt > 1:1170620/1‑151 (MQ=255) aagggggtgccccGGGCTGAAAATACAGCAAATTTGTTGCCAGCCGGTTCCACCCAG‑TCCCCCCCCCGAACCATGACGCGATGGTCGCGGGAAAAAAAATAATACGGGAAGCG‑AAGTTTGCGGGGA‑TT‑CCCCCCGCCATATTCACTTTCa < 2:673868/140‑1 (MQ=255) aaaGCGGTTGCCCGGGCTGAAAATACAGCAAATTTGTTGTCAGCCGTTTCCAACCAG‑TACCCCCCCCGAACCATGACGGGATGGTCGCGGGAAACAAAATAATAGTGGAAGCG‑AAGATGGCGGGTT‑TT‑CCCCCCGCCATATTCACTTTCAg < 2:531299/151‑1 (MQ=255) ggtgcccgaGGCTGAAAATACAGAGAAATTGTTGTCAGCCAGTTCCAACCAG‑TCCCCCCCCCGAACCATGACGCGATGGTCGCCGGAAACAAAATAATACTGGAAGCA‑AAGATGGCGGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTa < 2:882582/143‑1 (MQ=255) ggTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGt > 1:660937/1‑150 (MQ=255) ttccccAGGTTGAAAATGCAGCAAATTTTTTGCCAGCCAGTCCCACCCAG‑TCCCGCCCCCGAACCATGCCGCGATGGCCGCGGGAAACAGAAAAATACTGGAAGCA‑AAGATTGCCGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCgg < 2:1196869/144‑1 (MQ=255) tGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAAt > 1:1156285/1‑151 (MQ=255) cccGGGCTAAAAATACAGCAAATTTGTTGTCCCCCAGTCCCACCCGG‑CCCCCCCCCCGACCCAGGCCGCGGTGGCCGCGGGAAACAAAAAAATAGTGGAAGAA‑AAAATTG‑CGGGA‑TTCCCCCCCGCCATATTCACTTTCAGCGGTaaa < 1:672448/148‑1 (MQ=255) cccAGGCTCCAAAAACAGCGAAATTGTTGTCACCCAGTCCCACCCAG‑CCCCCCCCCCAAACCAGGGCGCGATGGTCGCGGGGAACAGAATAATACTGGAAGCA‑AAGATTGCCGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAAtgt < 2:259453/151‑1 (MQ=255) cAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAAtgtgt > 1:556468/1‑151 (MQ=255) cAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAAtgtgt > 2:2326/1‑151 (MQ=255) ggCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGc > 2:1265881/1‑151 (MQ=255) ggCTGAAAATACAGCAAATTTGTTGTCGGCCTTTCCCAACCAG‑TCCCCCCCCCAAACCATGACGCGAGGGTCGCGGGAAACAAAAAAATACGGGAAGCG‑AAGATTGCCGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGc < 2:1243978/151‑1 (MQ=255) aaTACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgc > 1:563904/1‑151 (MQ=255) aTACAGCAATTTTGTTGTCA‑CCAATTCCAACCCGTTCCCCCCCCCGACCCATGCCGCGCGGGCCCCGGGAAAAAAAAAAATAC‑GGAAGGGAAATTTTGCGGGTT‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgca < 1:255594/151‑1 (MQ=255) tACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgc > 2:1245906/1‑149 (MQ=255) aattttttgcCACCCAGTCCCACCCAG‑ACCCCCCCCCGACCCATGACGCGATGGCCGCCGGGAAAAAAATAATACTGGAAGCA‑AAGTTGGCCGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCAt < 1:393311/141‑1 (MQ=255) aatttgttgCCACCCATTCCAAACCAG‑CCCCCCCCCCGACCAAGGCCGGTATGTTCGCGGGGAAAAAAATAATACGGGAAGAG‑AAG‑TTGGCGGGATTT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgcagca < 1:1065338/143‑1 (MQ=255) aaaTTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGac > 1:624511/1‑151 (MQ=255) ttgtCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACacgac > 1:575284/1‑150 (MQ=255) ttgtCAGCCAGTCCCACCCAG‑TCCCCCCCCCAACCCAGGCCGCGATGGCCGCGGGAAAAAAAAAAATACTGGAAGCG‑AAGTTGGCGGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACacga < 1:390318/149‑1 (MQ=255) cAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCt > 1:293195/1‑151 (MQ=255) ccgttcccAACCAG‑TCCCCCCCCCGACCCAGGACGGGAGGGTCGCGGGAAAAAAAATAATTCGGAAGGCA‑AAGTTGGCGGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGAcc < 2:1044967/141‑1 (MQ=255) cAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCt > 2:621009/1‑151 (MQ=255) aaCCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGttt > 2:795342/1‑151 (MQ=255) acccagccccccccccGACCCATGACGCGAGGGTCGCGGGAAAAAAAATAATACTGGAAGCA‑AAGATTGCGGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGAc < 2:989617/136‑1 (MQ=255) ccAG‑TCCCCCCCCCAAACCATGGCGCGTTGGTCGCGGGAAAAAAAATAATACTGGAAGGG‑AAGATTGCCGGTT‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTcg < 1:310129/151‑1 (MQ=255) ccagccccGCCCCCGACCCAGGACGCGATGGTCGCCGGGAAAAAAAAAATACTGGAAGCG‑AAGATTGCGGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTcg < 2:334732/145‑1 (MQ=255) gtcccccccccGAACCATGCCGCGGGGGTCGCCGGAAAAAAAATAATCCGGGAAGCG‑AAGATTGCGGGAA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTcgc < 2:1123434/143‑1 (MQ=255) tACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGt > 2:450517/1‑150 (MQ=255) ccccccGACCCAGGACGCGTGGTTCGCGGGAAAAAAAATAATCCGGGAAGCG‑AAGTTTGCGGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGttt < 1:365719/150‑1 (MQ=255) cccccGAACCATGCCGGGATGGCCGCGGGAAACAGAATAATACGGGAAGCA‑AAGTTTGCCGGAA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGttt < 2:1150589/150‑1 (MQ=255) ccccGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTAc > 1:975322/1‑151 (MQ=255) caagcataggcgcgAGGGTCGCGGGAGAGAGAAGAATATTGGAAGGA‑AGGATGGCGGGGA‑TT‑GCGGCCGCCATATTGACGTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACCCGGGGACGTTGCTGACGTTTcgc < 1:387142/129‑1 (MQ=255) ccaggccgggATGGTCGCCGGAAAAAAAATAATACTGGAAGCA‑AAGTTTGCCGGTA‑TC‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATg < 1:1022865/142‑1 (MQ=255) aTGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATgcg > 2:1156188/1‑151 (MQ=255) gggggggTCGCGGGGAAAAAAAAAATCCGGAAAGCA‑AAGTTTGCGGGTA‑TC‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATgcg < 1:62413/141‑1 (MQ=255) gcgATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGt > 2:338918/1‑150 (MQ=255) aTGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGAc > 2:573948/1‑151 (MQ=255) cGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTc > 1:748755/1‑150 (MQ=255) ggaaaCAAATTAATACTGGAAGCG‑AAGTTTGCCGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTc < 2:520125/146‑1 (MQ=255) aaaaaaataatACGGGAAGCG‑AAGTTTGCCGGGA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaaca < 1:1254571/145‑1 (MQ=255) aaCAAAATAATATGGAAAGAG‑AGGTTTGGGGGAA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaacaa < 1:97672/151‑1 (MQ=255) aaCAAAATAATACGGAAAGGG‑AAGATTGCGGGAA‑TC‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaaca < 1:423122/150‑1 (MQ=255) cAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAAt > 1:222100/1‑151 (MQ=255) aGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAAt > 1:253970/1‑150 (MQ=255) aaataatACGGGAAGGA‑AAGTTGCCCGGAA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATac < 1:94065/150‑1 (MQ=255) ataataCGGGAAGCG‑AGGATGGCGGGGA‑TC‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATacaa < 2:726060/151‑1 (MQ=255) aataCGGGAAGCG‑AAGATGGCCGGGT‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATacaac < 1:1234008/150‑1 (MQ=255) ataCTGGAAGCG‑AAGATTGCCGGTT‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATacaac < 1:227574/149‑1 (MQ=255) ggAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAAc > 2:628922/1‑151 (MQ=255) ggaggagaagtgtGCGGGAA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGa < 1:890467/137‑1 (MQ=255) g‑AAGTTGGCCGGTA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCa < 1:195739/149‑1 (MQ=255) g‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACt > 2:523851/1‑151 (MQ=255) agtatGCTGGGA‑TA‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGGCACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTg < 1:105486/146‑1 (MQ=255) gagtcccGGGA‑TT‑AAACCAGCCATATTCACTTTCGGCGGTAAATGTGTGCTGTGTGCAGCATAGACACGACGACCTTGCTGACGTTGCGCGCAGTTTACCACACTGCGGCGTCGACCACGCTCAACAAATACAACaaa > 1:1048619/6‑138 (MQ=255) ttGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCaa > 2:116688/1‑150 (MQ=255) tGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCaaa > 1:219859/1‑150 (MQ=255) tGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaat > 1:500041/1‑151 (MQ=255) ggta‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatact < 1:609086/147‑1 (MQ=255) gggA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatacta < 2:147372/151‑1 (MQ=255) gggA‑TT‑CCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatac < 2:1146351/149‑1 (MQ=255) t‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatactaatact > 2:414748/1‑151 (MQ=255) t‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatactaatact > 2:734731/1‑151 (MQ=255) | GACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAACCAG‑TACCGCCCCCGAACCATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCG‑AAGATTGCCGGGA‑TT‑ACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAAATACTAATACT > NC_000913/3443130‑3443426 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |