| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,231,444 | 0 | T | G | 42.5% | 178.4 / 12.8 | 94 | G142G (GGT→GGG) | yohK | LrgB family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (12/42); new base G (40/0); total (52/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.90e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCG > NC_000913/2231294‑2231593 | caCCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGt < 4:169864/151‑1 (MQ=255) cATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑tt < 4:126277/151‑1 (MQ=255) tGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑tttccg > 1:1230702/1‑147 (MQ=255) gTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTcc < 4:631086/148‑1 (MQ=255) gTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTcc < 4:431826/148‑1 (MQ=255) gTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑tttccg > 1:224447/1‑146 (MQ=255) tttATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCa < 4:1347732/150‑1 (MQ=255) ttATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCGGGaa > 1:667547/1‑150 (MQ=255) cGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑tttccggaa > 1:42491/1‑139 (MQ=255) gCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGGATTGGC‑GGGA‑ATTCGGcgaaacgcg > 2:100805/1‑142 (MQ=255) gCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGt < 4:1361529/151‑1 (MQ=255) gTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGT‑TTTCCGCCATAAgcgccggtt > 4:154645/1‑146 (MQ=255) gTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCg < 1:502357/151‑1 (MQ=255) tGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTTCCGCAAACAGCGCAGGTTTCGT‑g > 1:697455/1‑151 (MQ=255) tGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGt < 4:169489/150‑1 (MQ=255) gATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGATTTCCGGCAA‑CAgcgccggtt > 1:159121/1‑138 (MQ=255) gATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCCAACAGCGCAGGTTTCggggtt > 1:1130782/1‑146 (MQ=255) gATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCAAACAGCGCCGGTTGCggggtt > 1:1273402/1‑146 (MQ=255) aTGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCAAACAGCGCCGGTTggggggttt > 1:20828/1‑143 (MQ=255) gTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTtcg < 4:1205706/151‑1 (MQ=255) gACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGGATTGGC‑GGGA‑TTTCCGCCAACAGCGCCGGTTGCGT‑GGTTTttgt > 4:159419/1‑150 (MQ=255) aCGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTtcgtcg < 4:1135996/151‑1 (MQ=255) aCGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGATTTCCGGC‑ATCAGCGCCGGTTTCGG‑GGtttt > 1:33998/1‑146 (MQ=255) gACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATc < 1:728051/151‑1 (MQ=255) aCTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCAAACAGCGCCGTTTGCGG‑GATTTTTGTCCGCAAcc > 1:983409/1‑151 (MQ=255) ttCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCCAACAACGCCGGTTTCGG‑GGTTTTTGTCGGCATcccc > 2:49340/1‑149 (MQ=255) tCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGGATTGGC‑GGGA‑TTTCGGCCAACAACGCCGGTTTCGG‑GGttttttttgggctcc > 4:504907/1‑137 (MQ=255) cGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGgc < 4:1123154/151‑1 (MQ=255) gTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCAAACAACGGCGGTTGGGT‑GGTTTTTGTCGGGATCCTccggg > 1:44164/1‑147 (MQ=255) ggCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGcg‑c‑g < 1:810837/151‑1 (MQ=255) aTTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTa < 1:1209982/151‑1 (MQ=255) ttgttgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTTGC‑GGGATTTCCGCCAAACA‑CGCAGGTTTCGTGGGTTTTCTTGGGCATCCCCgggcggg > 4:542619/1‑144 (MQ=255) ttgttgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCCATCAGCGCCGGTTGGGG‑GGTTTTTTTCGGGATCCTCGGCG‑C‑gg > 1:128896/1‑148 (MQ=255) tgttgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTTGC‑GGGA‑TTCCCGCCATCAACGCCGTTTTCGT‑GGTTTTTTTCGGCGTCCCCGGCG‑C‑GGGAtt > 4:1291277/1‑151 (MQ=255) tgttgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTAt < 1:574515/150‑1 (MQ=255) tgttgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGATTTCCGCCAAT‑AGCGCCGGTTTCGG‑GGTTTTTGTCGGCAACCTCCGCG‑C‑GGGAtt > 1:63851/1‑151 (MQ=255) gttgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTAtt < 1:837540/150‑1 (MQ=255) tgATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTg < 2:49748/150‑1 (MQ=255) gATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGGATTGGC‑GGGG‑TTCCCGCCCTCAGCGCCGGTTGCGT‑GGTTTTTGTTGGCCTCCTCCGCG‑C‑GGGAttttg > 4:125103/1‑148 (MQ=255) aTGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGcc < 1:1337834/151‑1 (MQ=255) gggCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCa < 1:767679/150‑1 (MQ=255) cgcTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACa < 1:1187373/151‑1 (MQ=255) gcTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑t < 1:1237779/151‑1 (MQ=255) gcTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTCCCGCAAACAGCGCCGGTTGCGG‑GGTTTTTTTCGGCCTCCTCCGCG‑C‑GGGATTTTGcc > 1:867572/1‑145 (MQ=255) gcTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTCCCGCAAACAACGCCGGTTTTGG‑GGTTTTTGTCCGCATCCCCCGGG‑C‑GGGAttttg > 1:424349/1‑141 (MQ=255) tCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑tt < 4:1145970/149‑1 (MQ=255) cACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGc < 4:386182/150‑1 (MQ=255) aTCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCCGTATTGGC‑GGGA‑TTTCCGCAAACAACGCCGGTTGGGG‑GGTTTTTTTCGGGATCCCCGGCG‑C‑GGGGTTTTGGCATACA‑CTGCtttaatcg > 4:777271/1‑144 (MQ=255) aTCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGGAATACGCGCAGGTTTTGG‑GGTTTTTTTCGGGGTACTCGGCG‑G‑GGGGTTTTGGCATACA‑CTTGTTTatgcgg > 4:1213606/1‑150 (MQ=255) cgccgcGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTTGC‑GGGA‑TTTCCGCCCACAGCGCCGGTTTCGG‑GGTTTTTTTCGGCCTCCTCGGCG‑C‑GGGGTTTTGCCCCACA‑TTTCtt > 4:903213/1‑142 (MQ=255) cgccgcGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAatgcgatg < 2:109822/151‑1 (MQ=255) cgccgcGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTCCCGCAATCAGCGCAGGTTTGGT‑GGTTTTTTTCGGGCTCCTCCGCG‑C‑GGGGTTTTGGCCCACA‑TTTCTTTatgcg > 4:749940/1‑148 (MQ=255) gccgcGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGGGT‑TTCCGCCAATCACCCCGCTTTTCGG‑GGTTTT‑TTCGGCATCCCCCGCGCC‑GGGTTTTGGcccaaaatttttta > 3:100905/1‑131 (MQ=255) gccgcGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCGGCAATCCGCGCCGGTTGCGG‑GGTTTTTGTCGGGATCCTCGGCG‑C‑GGGATTTTGCCCTAAA‑TTTCtt > 1:733237/1‑141 (MQ=255) cgcgTCAATCCCGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCCAACAGCGCAGGTTTCGG‑GGTTTTTGTCGGCATCCTCCGCG‑C‑GGGGTTTTGCCCTACA‑TTTCTTAatgcgatg > 1:310228/1‑148 (MQ=255) gcgTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTa < 1:225788/151‑1 (MQ=255) cgTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTAt < 4:1132071/151‑1 (MQ=255) aTCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTa < 1:1043937/151‑1 (MQ=255) ccTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTAc < 4:867512/150‑1 (MQ=255) ccTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTAc < 1:724700/150‑1 (MQ=255) tGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCCAACAGCGCCGGTTTCGG‑GGTTTTTGTCGGCATCCTCCGCG‑C‑GGGATTTTGCCCTACATTTGCTTAAT‑CGATGGGGATTTGTAcc > 1:718399/1‑149 (MQ=255) gCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCATTCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCaa < 4:1139631/150‑1 (MQ=255) gCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCa < 4:20813/149‑1 (MQ=255) cGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCAATCAGCGCAGGTTGCGG‑GGTTTTTGTCGGCCACCTCCGCG‑C‑GGGATTTTGGCATAAA‑TTTCTTAATTGGAAGCGGATTTGTACCaaa > 1:1125476/1‑149 (MQ=255) gAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCt < 1:1005565/151‑1 (MQ=255) cAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGATTTCCGGCAA‑CAACGCCGGTTTGGG‑GGTTTTTTTTGGCCTTCCCCGCG‑C‑GGGATTTTGGCAAACA‑ATTTTTTATTCGGTGCGTATTccttcccaa > 4:941716/1‑135 (MQ=255) cAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGATTTCCGCCAACCACGCCGGTTTCGGG‑GATTTTC‑TCGGCCTCCCCCGGG‑C‑GGGATTTTGGCCTACA‑TTTCTTTATGCGGTGCGGATTTGTaacca > 1:1250801/1‑138 (MQ=255) aGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTgcgcgc < 4:83221/151‑1 (MQ=255) gTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGcgcgcg < 1:667592/151‑1 (MQ=255) tCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTTGC‑GGGA‑TTTCCGCCAAAAGCGCCGGTTTCGG‑GGTTTTTTTCCGCATCCCCCGCG‑C‑GGGGTTTTGGCCTACA‑ATTCTTTATTCGCTGCGTATTTGTACCCAAACCGCGCGCgg > 1:1458918/1‑151 (MQ=255) cGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCGGCAAACAGCGCCGGTTTCGG‑GGTTTTTGTCGGCATCCTCCGCG‑C‑GGGATTTTGGCCTACA‑TTGCTTTATGCGATGCGTATTTGTACCAAAACCGCGCGCGGGCTgg > 1:1225709/1‑150 (MQ=255) cGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCCAACAACGCCGTTTTGGG‑GGTTTTTTTCGGGCTCCTCCGCG‑CGGGTTTTTGGCC‑TACA‑TTTCTTTATTCGGGGGGTATTTGTACCCAAACCGCGCGCggg > 4:1210318/1‑145 (MQ=255) gCCTATTGCAATGGCGGTTGGCGGCCGTATTGGC‑GGGA‑TTTCCGCAAACAGCGCAGTTTTCGG‑GGTTTTTGTCGGCAACCTCGGCG‑C‑GGGATTTTGGCCTACA‑ATTCTTTATTGGATGCGTATTTGTAACCAAACTGCGCGCGGGCTgg > 2:64138/1‑149 (MQ=255) gCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTTCGGCAATTCGCGCCGTTTTTGG‑GGTTTTTGGGGGCATCCTCTGGG‑C‑GGGATTTTGCCATACA‑TTTCTTTATAGGGTTGGTATTCCGACCAAAACTGCGCGCGGGCTgg > 1:1215657/1‑149 (MQ=255) gCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGGA‑TTTCCGCAATCAGCGCAGGTTTCGG‑GGTTTTTGTCGGCATCCTCGGGG‑C‑GGGATTTTGGCCTACA‑TTTCTTTATGCGATGCGGATTTGTAACAAAACTGCGCGCGGGCTgg > 1:699125/1‑149 (MQ=255) ccTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCaa < 1:76990/151‑1 (MQ=255) tGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATggg < 1:1140318/150‑1 (MQ=255) gCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATgggg < 1:1252392/150‑1 (MQ=255) cAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGAc < 1:1335846/151‑1 (MQ=255) aTGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTg < 1:1302494/151‑1 (MQ=255) cGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGGATTTTGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTc > 4:870940/1‑151 (MQ=255) tGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCa < 4:302961/150‑1 (MQ=255) ggcggcAGTATTGGC‑GGGA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GGTTTTCGTCGGCATCCTCGGCG‑C‑GGGATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGGCTGCCTCGc > 4:1153551/1‑148 (MQ=255) gcggcAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCCTACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGc > 2:191133/1‑151 (MQ=255) gcAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCt < 1:1390939/151‑1 (MQ=255) aGTATTGGC‑GGTA‑TTCCGGCAATCAGCGTAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGGATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCg > 1:200685/1‑151 (MQ=255) aGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGGATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGACTCGCACGCCCTCg > 4:379414/1‑151 (MQ=255) tATTGGC‑GGTA‑TTTCGGCAAACAGCGCAGTTTGCGG‑GATTTTTGTCGGCATCCTCGGCG‑C‑GGGATTTTGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAACTGCGCGCGGGCTGGCAATGGGGACTGCCTCGCACGCCCTCgg > 4:1404722/1‑150 (MQ=255) ttGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTa < 2:190136/150‑1 (MQ=255) tGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACg > 4:409828/1‑151 (MQ=255) tGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACg > 1:848941/1‑151 (MQ=255) c‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCTATGGGGACTGCCTCGCACGCCCTCGGTACGgcg < 1:948419/151‑1 (MQ=255) c‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGgcg > 1:201530/1‑151 (MQ=255) ggTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGgcgc > 1:827054/1‑151 (MQ=255) gTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGAGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGAACGgcgcg > 1:490236/1‑151 (MQ=255) | CACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGC‑GGTA‑TTCCGGCAATCAGCGCAGTTTGCGT‑GATTTTCGTCGGCATCCTCGGCG‑C‑GGTATTTGGCCATACA‑TTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCG > NC_000913/2231294‑2231593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |