| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,995,457 | 0 | T | G | 41.9% | 169.7 / 19.5 | 93 | G232G (GGT→GGG) | dapF | diaminopimelate epimerase |
| Reads supporting (aligned to +/- strand): ref base T (9/45); new base G (39/0); total (48/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.86e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTG > NC_000913/3995311‑3995606 | cGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGGATCAGCAAGGGTTg > 4:64124/1‑150 (MQ=255) gTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCt < 4:780851/151‑1 (MQ=255) gTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGCGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCCGGAGGGAATCAGCAAAGttttc > 4:879600/1‑148 (MQ=255) tttCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCCGGAGGGGTTCCGCCAGGGTTTCTgg > 4:1047777/1‑151 (MQ=255) tttCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTg < 1:1041077/150‑1 (MQ=255) tttCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTg < 4:836663/150‑1 (MQ=255) tCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGATTCAGCAAGGGTTGCTgggc > 1:1125487/1‑149 (MQ=255) ccGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCg < 1:1086421/151‑1 (MQ=255) gcgcgcCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGTTTCAGCAAGGTTTGCTGGCCgaagaa < 1:1451369/151‑1 (MQ=255) gcCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTAc < 2:108561/151‑1 (MQ=255) gcCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGAAAGGGTTTCTGGCCGgagaagaa > 4:224995/1‑148 (MQ=255) cAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGGTTCAGCAAGGGTTGCTGGCCGaagaagga > 1:86762/1‑146 (MQ=255) cAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTAcgc < 1:102216/151‑1 (MQ=255) cAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTAcgc < 1:1182469/151‑1 (MQ=255) cAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGGATTAGCAAGGGTTGCTGGCCGGAGAAGGAcg > 4:106742/1‑150 (MQ=255) cAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGGTTGAGGAGGGGGTCAGCAAAGGTTGCttggcggaaaa > 4:346450/1‑135 (MQ=255) tCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCCGTAGGGGTTTAGGAAAGGTTGGTGGGCggagaaagaagcgggg > 1:790726/1‑140 (MQ=255) tCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGATTCAGCAAAGGTTTCTGGCCGAAGAAATAAGCgggg > 1:912838/1‑150 (MQ=255) cGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGGTTCAGCAAGGGTTTCTGGCCGGAGAAGGACGCgggg > 2:2347/1‑149 (MQ=255) cGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGaa < 4:772451/151‑1 (MQ=255) cGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGGTTGCTGGCCGAAGAAGTACGCGTgg > 1:438846/1‑149 (MQ=255) ttttATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGAGTTAGGAAAGGTTGCTGGCGGGAAAAGGAAGCGTTGAAATc > 1:298402/1‑151 (MQ=255) tttATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCCGGAGGGGTTCAGCAAGGGTTGCTGGCCGAAGAAGAAAGCGGGGAACTcc > 4:364381/1‑151 (MQ=255) ttATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTTCCGGAAGGAATCAGCAAAGGTTGCCGGGCGAAGAAAGACGCGGGGGAATccc > 4:349341/1‑151 (MQ=255) aTGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGGTTCAGCAAGGGTTGCTGGCCGGAGAAGTACGCGTGGGACTcccc > 1:1103749/1‑150 (MQ=255) aTGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGATGCAGGAGGGAGTTCGCAAAGTGTGGCGGCCGAAAAAGAACGCGGGGGACTcccc > 4:123814/1‑150 (MQ=255) tGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCcgg > 1:873678/1‑151 (MQ=255) gCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCcggc < 4:1217874/151‑1 (MQ=255) cAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCGGTAGGGATTCAGCAAGGGTTTTTGGGCGGAGAAAAACCCGTgggaggcccccg > 1:122067/1‑139 (MQ=255) aaGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGGAGTAGGGAGTCAGGAAGGGGTGATGGCCGGAGAAGTACGCGTGGGAGTCCCccgcgg > 1:111749/1‑151 (MQ=255) aaGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGATTCAGCCAGGGTTTCTGGCCGAAGAAGGACGCGTGGGAATCCCcggcgg > 1:49660/1‑151 (MQ=255) gTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCCGTAGGGATTCAGCAAAGGTTGCTGGCCGAAAAAAGACGCGGGGGACCCCCccgcgg > 4:800802/1‑149 (MQ=255) tGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGATGCAGGGGGGGGTCATCAAAGTTTTGTTGCCCCAGAAGGATGCGCGGGACCCCCCggcgggcg > 4:1472717/1‑151 (MQ=255) ggTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCCGGAGGGATTCAGCCAGGGTTGCTGGCCGAAGAAGGACGCGTGGGACTCCCcggccg > 4:251700/1‑145 (MQ=255) ggTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGGTTTCTGGCCGAAGAAGAACGCGGGGGAATCCCCCGCGggcg > 4:1329334/1‑150 (MQ=255) ttAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGGTTCAGCAAGGGTTGCTTGCCGCAGAAGAACGCGGGGGACTCCCCCGCGggcg > 4:141921/1‑148 (MQ=255) tAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGGAGGAGGGGGTCTGCAAGGGTTGGCTGCCGGAGAAGAAAGCGCGGGACTCCCccgcgggggcctt > 4:202670/1‑144 (MQ=255) aaGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCtt < 1:1233943/150‑1 (MQ=255) aaGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCtt < 1:1407896/150‑1 (MQ=255) aaGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCtt < 4:1261326/150‑1 (MQ=255) gcgcGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCCGTAGGGGTTTAGCCAGGGTTGCTGGCCGAAGAAGGACGCGGGGGACTCCCCggcgggcggttt > 1:1085591/1‑144 (MQ=255) cgcgAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGata < 1:906572/151‑1 (MQ=255) cgcgAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGata < 1:422100/151‑1 (MQ=255) gcgAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGatat < 1:1459185/151‑1 (MQ=255) gCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGcc < 4:1434943/151‑1 (MQ=255) atatTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGGTTCAGCAAGGGTTGCTGGGCGAAGAAGGAAGCGGGGAACTCCCCGGCGGGCGTCTTGATATCGcc > 1:632845/1‑149 (MQ=255) tatTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGGTTCAGCAAGGGTTGCTGGCCGAAGAAGTACGCGTGGGACTCCCCGGCGGGCGGCTTTATATCGCCTgg > 1:123291/1‑151 (MQ=255) atTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTgg < 4:605015/150‑1 (MQ=255) cGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAg < 4:121123/151‑1 (MQ=255) cGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAg < 1:1195762/151‑1 (MQ=255) gTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAAGGTTGCTGGCCGGAGAAGGACGCGGGGGAATCCCCGGCGGGCGTCTTGATATCGCCCGGgaa > 1:835212/1‑149 (MQ=255) ttACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGGAGTAGGGGATTAGCAAGGTTTTCTGGCCCGAGAAGGACGCGGGGGAATCCCCGGGGGGCGGCTTGTTATCGCCCGGGAAgg > 4:548569/1‑149 (MQ=255) ttACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGt < 4:538238/150‑1 (MQ=255) ttACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGGTTCAGCAAGGGTTTCTGGCCGAAGAAGTACGCGGGGGACTCCCCCGCGGGCGTCTTGGTATCGCCCGGgaa > 1:281838/1‑147 (MQ=255) aCGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGGTTCAGCAAGGGTTGCTGGCCGAAGAAAGACGCGTGGAACTCCCCGGCGGGCGGCTTGGTATCGCCTGGaaaag > 1:1309714/1‑145 (MQ=255) gTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTc < 4:1125397/151‑1 (MQ=255) gTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGGTGGAGGAGGGGATCAGCAAGGGTTGCTGGCCGGAGAAGGACGCGTGGGACTCCCCGGCGGGCGGCTTGATATCGCCCGGGAAAGGCCggg > 4:242385/1‑149 (MQ=255) tttATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGAATCAGGAAGGTTTGCTTGGCGAAGAAATACGCGGGGGACTCCCCCGCGGGCGGCTTTGTATCGCCCGGGAAGGGCCcggg > 1:362714/1‑148 (MQ=255) ttATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGTAGGAGGGGTTCAGCAAGGGTTTCTGGCCCGAGAAGGACGCGTGGGACTCCCCGGCGGGCGTCCTTTTATTGCCCGGGAAAGGCCggggga > 4:938493/1‑147 (MQ=255) tATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCAc < 1:1251103/150‑1 (MQ=255) gCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTta < 4:209415/151‑1 (MQ=255) gTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGGTGCCGGAGGGGATCAGCCAGGGTTTCTGGCCGAAGAAGGACGCGGGGGGCCCCCCGGCGGTCGGCTTTTTATTTCCTTGAAAGGGCCGGGGCACCCggt > 4:396941/1‑146 (MQ=255) tGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGGTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCCGCGGGCGGCTTTGTATCGCCTGGAAAAGGCCGGGGCACCCGTtat > 1:1150762/1‑149 (MQ=255) tGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGGTGCAGGAGGGATTTAGCAAGGGTTGCTGGCCGAAGAAAGAAGCGGGGGACTCCCCCGCGGGCGGCTTTGTATTCCCTGGGAAAGGCCGGGGCACCCCTtat > 4:952823/1‑149 (MQ=255) ggggCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTtatata < 4:1390437/151‑1 (MQ=255) cAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGAc < 4:244345/151‑1 (MQ=255) agaAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGAATTAGCAAGGGTTTCTGGCCGGAGAAGGACGCGGGGGACTCCCCCGCGGGCGGCTTTGTTTCCCCCGGGAAAGGCCGGGGCACCCCGTTTATATGAATgg > 4:142804/1‑150 (MQ=255) aaaCCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGccc < 1:133717/151‑1 (MQ=255) aaaCCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGccc < 3:15906/151‑1 (MQ=255) cccAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCcggc < 1:813249/151‑1 (MQ=255) cTGCGGCAGCGGCGCGTGTGCGGCGGTTTCCGGAGGGATTCAGCCAGGGTTGCTGGGCGGAAAAAGAAGCGGGGGACCCCCCGGCGGGCGTTTTTTTATTGCCTGGGAAAGAGCGGGGGACCCCTTATATATGTATGGCCCCGGGGGACa > 4:777602/1‑150 (MQ=255) tGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGGAGGGAGTCAGCAAGGGTTGCTGGCCGAAGAAGGACGCGGGGGACTCCCCCGCGGGCGGCTTGATATCGCCTGGGAAGGTCCGGGGCACCCCCTATATATGACTGGCCccgcggga > 4:387162/1‑145 (MQ=255) gCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATg < 2:94396/150‑1 (MQ=255) gCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGt < 4:557858/151‑1 (MQ=255) cAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTac < 1:1204823/151‑1 (MQ=255) aGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTacg < 1:1331946/151‑1 (MQ=255) aGCGGCGCGTGTGCGGCGGTTGCAGGAGGGGTTCAGCAAGGGTTGCTGGCCGAAAAAGTAAGCGGGGGAATCCCCCGCGGGCGGCTTGATATCGCCTGGAAAAGGCCCGGGCACCCGGTATATATGAATGGGCCGGCGGGACa > 1:111955/1‑143 (MQ=255) gcggcgCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTacga < 4:487084/151‑1 (MQ=255) cggcgCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTacgac < 4:153068/151‑1 (MQ=255) cggcgCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGGTTGCTGGCCGAAGAAGTACGCGGGGGACTCCCCCGCGGGCGGCTTGATATCGCCCGGGAAAGGCCGGGGGACCCCTTATATATGACCGGCCcggggg > 4:511115/1‑137 (MQ=255) ggcgCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTacgac < 3:193191/150‑1 (MQ=255) cgcgTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGa < 2:28542/151‑1 (MQ=255) gtgCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTAt < 1:342995/151‑1 (MQ=255) gcggTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATc < 1:975537/151‑1 (MQ=255) cggTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTcct > 4:783530/1‑147 (MQ=255) cggTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCt < 4:801716/151‑1 (MQ=255) ggTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCt > 4:925068/1‑150 (MQ=255) gTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTAt < 4:364651/151‑1 (MQ=255) gCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGaa < 4:431587/151‑1 (MQ=255) gCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGaa < 4:691754/151‑1 (MQ=255) gTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCa < 1:724223/151‑1 (MQ=255) gCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGga > 2:177325/1‑149 (MQ=255) aaGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGgaa > 4:257614/1‑148 (MQ=255) gTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTg < 2:85339/151‑1 (MQ=255) | CGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTG > NC_000913/3995311‑3995606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |