| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 535,918 | 0 | A | G | 41.6% | 135.2 / 18.6 | 89 | E70G (GAG→GGG) | hyi | hydroxypyruvate isomerase |
| Reads supporting (aligned to +/- strand): ref base A (16/36); new base G (37/0); total (53/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.59e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTTTGAGAAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGATTCA > NC_000913/535768‑536065 | gTTTTGAGAAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGa < 1:1693800/151‑1 (MQ=255)gTTTTGAGAAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGa < 2:1256555/151‑1 (MQ=255)gTTTTGAGAAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGa < 1:1505065/151‑1 (MQ=255) ttGAGAAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAgcg > 2:486167/1‑151 (MQ=255) ttGAGAAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAgc < 1:167866/150‑1 (MQ=255) gagaAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGcgcg < 2:174654/151‑1 (MQ=255) agaAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGGGGGGGAGCGCgg > 2:921473/1‑151 (MQ=255) gcAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGCCT‑GGGCGGTGGGGGGgcgccggtttggctg > 2:1002227/1‑139 (MQ=255) aGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGTCT‑GGGCGGCGGGGGGGGGGGGGATTGCCTg > 2:187964/1‑148 (MQ=255) tgtgGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGGCT‑GGGCGGCGGGGGGGGGCGGGGTTGGCTGTAtt > 1:1248817/1‑150 (MQ=255) gtgGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGGAC‑GGGCGGGGGGGGAGCGCGGGATTTCCTGTCtt > 1:1066488/1‑149 (MQ=255) gtgGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTcc < 2:946963/151‑1 (MQ=255) gtgGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGGGGGGGGGGGGGGCGGTATTGTCTGTAtt > 2:54284/1‑149 (MQ=255) gTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGGGGCGGGGGGGCGCGGGATTGCCTGTATTCCTgg > 2:664988/1‑151 (MQ=255) gTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTgg < 2:16485/151‑1 (MQ=255) ttCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGcc < 2:216805/150‑1 (MQ=255) ttCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGcc < 1:150804/150‑1 (MQ=255) ggcgTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCGCAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTgaag < 1:964831/151‑1 (MQ=255) gcgTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGGCT‑GGGGGGGGGGGGAGGGCGGGATTGCCTGTATTCCTGGCCGTg > 1:271747/1‑147 (MQ=255) agTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACTGGGGGGGGGGGGGGGGGCGGTA‑TGTCTGTATTTCTTGGCGTgga > 1:279547/2‑146 (MQ=255) aaTTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGCGGGGGGGGGGGGCGGGATTTCCTGTATTTCTGGCCGCGGAGAAGAGtt > 2:1493519/1‑151 (MQ=255) aTGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCggg < 1:188177/151‑1 (MQ=255) ttCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑TGGCGGCGGGGGGGGGCGGGATTTCCTTTATTCCTGGCCGTGGAGGAAAGTTTCGGGGTgg > 2:564636/1‑151 (MQ=255) ccTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGc < 1:887727/150‑1 (MQ=255) ccTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGc < 2:781007/150‑1 (MQ=255) ccTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCg < 2:743466/151‑1 (MQ=255) ccTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑AGGCGGCGGGGGGGAGCGGTTTTGCCCGTATTTCTGGGCCGGGAGAAAAGTTTTGGGGTgg > 2:845161/1‑149 (MQ=255) tATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGt < 2:1439382/149‑1 (MQ=255) aTGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTagc < 1:6068/151‑1 (MQ=255) tGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGGAT‑GGGGGGCGGGGGGGCGGGGGATTTCCTGTTTTTCTGGGCGCGAAGAAGAGGTTTggggggggggag > 1:608740/1‑140 (MQ=255) aCTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGGGGGGGGGGGGGGCGGGGTTGCCTGTATTTCTGGGCGTGGAGAAGAGGTTTGGGGTGGCGGagcag > 2:981180/1‑150 (MQ=255) cTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGGGGCGGGGGGGCGCGGGATTGCCTGTATTTCTGGCCGTGGAGAAGAGTTTTGGGGTgggggag > 1:465124/1‑141 (MQ=255) cTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGCGGCGGGGGAGCGGGGGATTTCCTGTATTTCTTGCCGGGGAGAAAAGGTTTGGGGTgggggggga > 1:141283/1‑141 (MQ=255) tACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGGGGCGGGGGGGCGGGGGATTGCCTGTATTCCTGGCCGGGGAGGAGAGGTTTGGGGTgggggag > 2:457904/1‑140 (MQ=255) tACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGCGGCGGGGGGGCGCGGGATTGCCTGTATTCCTGGCCGTGAAGAAGAGGTTTGGGGTGGGGTagcagc > 2:24392/1‑149 (MQ=255) tACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACA‑GGGGGGCGGGGGGGAGCGGGAGTGGCTGTATTCCTGGGCGTGGAGGAGGGGTTTGGGGTGGGGTaggag > 1:469846/1‑148 (MQ=255) aCGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTagcagcag < 1:98833/150‑1 (MQ=255) cGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGAGT‑GGGCGGGGGGGGGGGGCGGGATTGCCTGTATTTCTTGCCGTGGAGAAGAGGTTTGGGGTgg > 1:1614587/1‑138 (MQ=255) tggaagaaTTAAAAAATGTGCTGGGGAGTAA‑AAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGa < 2:249383/144‑1 (MQ=255) tGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGGGGCGGGGGGGCGCGGGATTGCCTGTATTTCTGGCCGTGAAGAAGAGGTTTGGGGTGGCGGAGCAGCAGCGAtt > 2:1689103/1‑148 (MQ=255) gaagaaTTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGtt < 1:1081105/151‑1 (MQ=255) agaaTTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGGGGCGGGGGGGGGCGGGATTGCCTGTATTTCTGGCCGCGAAGAAGAGTTTCGGGGTGGGGGAGCAGCAGCGATTCGTTAt > 1:1483868/1‑151 (MQ=255) gaaTTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATg < 1:797664/151‑1 (MQ=255) gaaTTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGAAG‑GGGGGGGGGGGGGGGGCGGGATTGCCTGTATTTCTGGGCGGGAAGAAGAGGTTTGGGGGGGCGGAGCAGCAGCgggtagtt > 1:742953/1‑141 (MQ=255) tAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑TGGGGGCGGGGGGGGGCGGGATTGCCTGTATTTCTGGCCGGGGAGAAGGGTTTCCGGGTGGGGTTGGAGGAGAGGTTTGTTATTccc > 1:1330830/1‑150 (MQ=255) tAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGGGGCGGGGGAGCGCGGGTTTGCCTGTATTACTGGGCGTGGAGAAGGGATTTGGGATGGCGGAGGAACCGCGAttaggta > 2:554049/1‑140 (MQ=255) aaaCATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGGGCGCGGTATTGCCTGTATTCCTGGCCGGGGAGAAGAGTTTCGGGGTGGGGTAGCAGCAGCGATTCGTTATGccc > 2:620304/1‑148 (MQ=255) cATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGCAT‑GGGGGGCGGGGGGGGGCGGGATTGTCTGTATTTCTTGGCGGGGAGAAGAGGTTCGGGGGGGGGTAGGAGGAACGAGTCGtttttgccgggcg > 1:1580145/1‑139 (MQ=255) tgtgCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGGCT‑GGGCGGCGGGGGGGCGCGGGATTTCCTGTATTTCTGGGCGTGGAGAAGAGGTTTGGGGTGGGGGAGCAGCAGCGGTTTGTTTTGTCcgcgcg > 1:533637/1‑148 (MQ=255) tgtgCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGCGGCGGGGGGGCGCGGGAATGCCTGTATTCCTTGCCGGGAAGAAGAGGTTCGGGGTGGCGGAGCAGCAGCGATTCGTTATGCCCGTGCGCt > 2:431647/1‑150 (MQ=255) gtgCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGGGGGGGATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGGGGGCGGAGCAGCAGCGAGTCGTTATGCCCGGGCGCTgg > 2:39813/1‑151 (MQ=255) tgCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGGGGGGGGGCGCGGGAATGGCTGTATTCCTGGCCGGGAAGAAGAGATTCGGGGTGGCGGAGCAGCAGCGATTCGTTATGCCCGTGCGCTggg > 2:301501/1‑151 (MQ=255) tgCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGGGGGCGGGATTGGCCGTATTCCTGGCCGTGAAGAAGGGTTTTGGGGTGGGGTAGCAGCAACGGTTCGTTATGCCCCTGCGCTggg > 2:659221/1‑151 (MQ=255) gCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGCGGCGGGGGGGCGCGGGATTGCCTGTATTCCTTGCCGTGAAGAAGAGGTTCGGGATGGCGGAGCAGCAGCGATTTGTTTTTCCCGGGCGCTggg > 2:1115488/1‑150 (MQ=255) gCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGCGGCGGGGGGGGGCGGGATTTCCTGTATTCCTGGCCGGGGAGAAGAGGTTCGGGGTGGCGGAGCAGCAGCGATTCGTTTTTCCCGGGCGCCGGGgaa > 2:379070/1‑149 (MQ=255) cGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGCGGCGGGGGAGCGCGGGATTGCCTTTATTTCTGGCCGTGGAGAAGAGGTTCGGGGTGGCGGAGCAGCAGCGATTCGTTATTCCCGTGCGCTGGGgaata > 1:1282616/1‑150 (MQ=255) gAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGCGGCGGGGGGGCGCGGGATTGCCTGTATTTCTGGCCGGGAAGAAGAGGTTTGGGGTGGCGGAGCAGCAGCGATTCGTTATGCCCGTGGGCTGGGgaataa > 1:1549075/1‑150 (MQ=255) gTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGCGGCGGGGGAGGGCGGGATTGCCTGTATTCCTGGCCGTGAAGAAGAGGTTCGGGGTGGCGTAGCAGCAGCGATTCGTTATGCCCGCGCGCTGGGTAATaaaa > 2:1021701/1‑150 (MQ=255) aataaACTCGAACATACGCTGCACAATTTACCGGCGGGTGACA‑GGGGGGCGGGGGGGGGCGGGATTGCCTTTTTTCCCTGCCGGGAAGAAGAGTTTCGGGGGGGGGTAGCGGCAGGGATTCGTTATGCCCGGGGGCTGGGGAATaaaaaa > 1:503349/1‑150 (MQ=255) taaACTCGAACATACGCTGCACAATTTACCGGCGGGGGACT‑GGGCGGCGGGGGAGGGCGGGATTGCCTGTATTCCTGGCCGTGAAGAAGAGGTTTGGGGTGGGGGAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGGAATaaaaaaa > 1:902411/1‑149 (MQ=255) taaACTCGAACATACGCTGCACAATTTACCGGCGGGCGACT‑GGGCGGCGGGGGGGGGCGGGATTGCCTGTATTCCTGGCCGGGGAGAAGAGGTTTGGGGGGGGGGAGCAGCAGCGATTTGTTATGGCCGGGCGGTGGGGAATaaaaaaaat > 1:872767/1‑149 (MQ=255) aaaCTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTa < 1:1479844/151‑1 (MQ=255) aaCTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTaa < 2:346335/151‑1 (MQ=255) aaCTCGAACATACGCTGCACAATTTACCGGCGGGGGGCT‑GGGCGGCGGGGGGGCGCGGGATTTCCTGTATTCCTGGCCGTGGAGAAAAGGTTCGGGGTGGCGGAGCAGCAGCGAGTTGTTATTGCCGTGCGCTGGGGAATaaaaaaa > 1:657865/1‑147 (MQ=255) cTCGAACATACGCTGCACAATTTACCGGCGGGAGAAT‑GGGCGGGGGGGGGGCGCGGGATTGCCTGTATTTCTGGCCGTGAAGAAGAGGTTCGGGGTGGGGTAGCAGCAGCGAATCGTTATGCCCCTGCGCTGGGGAATAAAAAAATTAACt > 2:628192/1‑151 (MQ=255) cGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACt < 1:1699188/149‑1 (MQ=255) aCATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGGGGGCGGGGTTTACTTTTTTTCTGGGCGGGGAGAAGAGGTTTGGGGGGGGGGGGCAGCAGCGGTTCGTTATTCCCGCGGGCTGGGGAATaaaaaaa > 1:389446/1‑140 (MQ=255) aCATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTg < 2:191539/151‑1 (MQ=255) cATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTgg < 1:1291940/151‑1 (MQ=255) aCGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTc < 1:26427/150‑1 (MQ=255) aCGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCg < 1:1137848/151‑1 (MQ=255) aCGCTGCACAATTTACCGGCGGGGGACA‑GGGCGGGGGGGGGGGGCGGGGTGGGCTGTATTTCTGGCCCGGAAGAAGAGGGTGCGGGTGGGGGAGCAGGACCGAATCGTTATTGCCGCGCCCGTGGGATTAAAAAAAATAACTGTCttggcg > 1:1036924/1‑146 (MQ=255) cGCTGCACAATTTACCGGCGGGTGACT‑GTGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAATAGTTTCTGAATAGCGTAGCAGCAGCGATTCGTTATGCCCCTTCGCTCGGTAATAAAAAAATTAACTCTCTGATct < 1:116730/150‑2 (MQ=255) cGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCgg < 1:1527360/151‑1 (MQ=255) cGCTGCACAATTTACCGGCGGGGGACC‑TGGCGGGGGGGGGGGGCGGGATTGCCTGGATTTCTGGCCGTGGAGGAGAGTTTCTGGGGGGGGGAGCAGCAACGAATCGGTTTGCCCGGGCGGGGGGGAAAAAAAAAAATAACTATCTGGGCgg > 2:613552/1‑151 (MQ=255) cTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGGGCGCGGGATTGCCTGTATTCCTGGGCGGGGAGAAGAGGTTTTGGGGGGGGGAGCAGCAGCGGTTCGTTATGCCCCGGCGCTGGGGAATAAAAAAAATAAATGTCTGGTCgg > 1:1301065/1‑149 (MQ=255) gCAGAATTTCCCGGCGGCTGAGT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGGCTGGTCGGTaat < 1:1034551/151‑2 (MQ=255) aTTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGcc < 2:1334739/151‑1 (MQ=255) ttACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCg < 2:596647/150‑1 (MQ=255) aCCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCt < 2:1611358/151‑1 (MQ=255) ccGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTg < 1:486151/151‑1 (MQ=255) gggTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTc < 1:1015159/151‑1 (MQ=255) ggTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTca < 1:1271360/151‑1 (MQ=255) gACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTcagc > 2:1004289/1‑150 (MQ=255) gACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTcagc > 1:1369527/1‑150 (MQ=255) aCT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTcagcag < 2:769353/151‑1 (MQ=255) ggcggcGGGGGAGCGCGGTATTGCCTGGATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGACGGTAAAACGCCGGCTGGTTTCAGCAGTGa > 1:6416/1‑150 (MQ=255) cggcggGGGAGAGCGGTAGTGCCTGTATTCCTAGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTTGTTATGCCCGGGCGCTGGGGTATACAAAAATTAACTGTCCGGTCGGTAAAAAGCCGGCTGGTTTCAGCCGCGaa > 1:1297770/1‑149 (MQ=255) ggcggGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAg < 1:457888/151‑1 (MQ=255) cggGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAAc > 1:1524934/1‑147 (MQ=255) gggggAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGAtt > 2:1034818/1‑151 (MQ=255) gggAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGATTCa < 2:1185763/151‑1 (MQ=255) | GTTTTGAGAAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACT‑GGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGATTCA > NC_000913/535768‑536065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |