Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,807,248 +T coding (117/993 nt) proX → glycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,807,2471.T100.0% 407.0 / NA 103T39I (ACT→ATT) proXglycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base T (62/41);  total (62/41)

Only 100 of 111 total aligned reads displayed.

CGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCAC‑TGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGAC  >  NC_000913/2807097‑2807391
                                                                                                                                                       |                                                                                                                                                
cGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCAc                                                                                                                                                   >  2:331795/1‑151 (MQ=255)
 gggCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCAC‑t                                                                                                                                                 >  1:1081717/1‑151 (MQ=255)
  ggCCTTTTCCCCCTGCCCAAAAAAAGAAAAACAATGCGGCATAGCGTTCCTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCAC‑tt                                                                                                                                                <  2:286814/151‑2 (MQ=255)
  ggCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCAC‑tt                                                                                                                                                <  1:100055/151‑2 (MQ=255)
   gCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCAC‑ttg                                                                                                                                               <  2:570256/151‑3 (MQ=255)
   gCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCAC‑ttg                                                                                                                                               >  2:1722766/1‑149 (MQ=255)
     aTTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCAC‑ttga                                                                                                                                              >  1:65253/1‑147 (MQ=255)
       tATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCAC‑ttga                                                                                                                                              >  1:1078290/1‑145 (MQ=255)
            cccTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCt                                                                                                                                       >  1:696435/1‑151 (MQ=255)
              cTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTc                                                                                                                                     >  1:285845/1‑151 (MQ=255)
                gCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTcc                                                                                                                                    >  2:132199/1‑150 (MQ=255)
                gCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCa                                                                                                                                   <  2:505690/151‑1 (MQ=255)
                 ccAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTcc                                                                                                                                    >  2:299900/1‑149 (MQ=255)
                  cAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTcc                                                                                                                                    >  2:665375/1‑148 (MQ=255)
                   aaaaaaaGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGAc                                                                                                                                <  1:1143219/151‑1 (MQ=255)
                   aaaaaaaGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGAc                                                                                                                                >  1:1706394/1‑151 (MQ=255)
                    aaaaaaGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACg                                                                                                                               <  1:1109530/151‑1 (MQ=255)
                       aaaGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACgctg                                                                                                                            >  2:1311973/1‑151 (MQ=255)
                         aGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAGCCTTCCAGACgctgct                                                                                                                          <  2:392300/151‑1 (MQ=255)
                         aGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACgctgct                                                                                                                          <  2:1119343/151‑1 (MQ=255)
                         aGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACgctgct                                                                                                                          >  2:1331416/1‑151 (MQ=255)
                          ggAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGctgctg                                                                                                                         >  1:1450927/1‑151 (MQ=255)
                            aaTAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGt                                                                                                                       >  1:1165473/1‑151 (MQ=255)
                            aaTAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGt                                                                                                                       >  2:678749/1‑151 (MQ=255)
                             aTAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTc                                                                                                                      >  2:84425/1‑151 (MQ=255)
                               aaCAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAg                                                                                                                    <  2:1231241/151‑1 (MQ=255)
                                aCAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGt                                                                                                                   >  1:910094/1‑151 (MQ=255)
                                aCAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGt                                                                                                                   >  1:1774964/1‑151 (MQ=255)
                                 cAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTc                                                                                                                  <  2:1158392/151‑1 (MQ=255)
                                  aaTGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCg                                                                                                                 <  1:1619794/151‑1 (MQ=255)
                                  aaTGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTACCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCg                                                                                                                 >  1:693842/1‑151 (MQ=255)
                                   aTGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGt                                                                                                                <  2:379098/151‑1 (MQ=255)
                                    tGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTg                                                                                                               >  2:1085572/1‑151 (MQ=255)
                                    tGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTg                                                                                                               >  1:402159/1‑151 (MQ=255)
                                     gCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTgc                                                                                                              <  2:665121/151‑1 (MQ=255)
                                     gCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTg                                                                                                               <  2:337528/150‑1 (MQ=255)
                                     gCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTg                                                                                                               <  1:1737067/150‑1 (MQ=255)
                                         cATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTg                                                                                                          >  1:493988/1‑151 (MQ=255)
                                         cATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTg                                                                                                          <  1:1470593/151‑1 (MQ=255)
                                            aGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTgg                                                                                                         >  1:1535555/1‑149 (MQ=255)
                                            aGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGgag                                                                                                       <  2:880566/151‑1 (MQ=255)
                                            aGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGgag                                                                                                       <  2:242945/151‑1 (MQ=255)
                                                 aCTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAAtt                                                                                                  <  2:242825/151‑1 (MQ=255)
                                                   tttttGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAAtt                                                                                                  >  2:524947/1‑149 (MQ=255)
                                                      ttGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGt                                                                                              <  2:885993/150‑1 (MQ=255)
                                                      ttGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGt                                                                                              <  2:192671/150‑1 (MQ=255)
                                                       tGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGtt                                                                                             >  1:621096/1‑150 (MQ=255)
                                                        gCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTta                                                                                            <  2:1674879/150‑1 (MQ=255)
                                                         cGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTtat                                                                                           >  1:428333/1‑150 (MQ=255)
                                                           aCAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATAcc                                                                                        >  2:1439167/1‑151 (MQ=255)
                                                            cAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCg                                                                                       <  1:1293799/151‑1 (MQ=255)
                                                             aGCGTTTGCCACGCTTATCTCTACACAACCTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCAGCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCg                                                                                       <  2:533404/150‑1 (MQ=255)
                                                              gCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTc                                                                                     >  1:428178/1‑151 (MQ=255)
                                                                gTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTca                                                                                    >  1:1175809/1‑150 (MQ=255)
                                                                 tttGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTcaa                                                                                   <  1:389839/150‑1 (MQ=255)
                                                                  ttGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTcaac                                                                                  <  1:1348306/150‑1 (MQ=255)
                                                                    gCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACaaa                                                                               <  1:552697/151‑1 (MQ=255)
                                                                     ccACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAAc                                                                              <  2:1457849/151‑1 (MQ=255)
                                                                     ccACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAAc                                                                              >  2:770493/1‑151 (MQ=255)
                                                                       aCGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAAccc                                                                            <  1:1106545/151‑1 (MQ=255)
                                                                        cGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAAccc                                                                            >  2:1212842/1‑150 (MQ=255)
                                                                        cGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAAccc                                                                            >  1:1339986/1‑150 (MQ=255)
                                                                        cGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCa                                                                           <  1:166919/151‑1 (MQ=255)
                                                                                tctACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGt                                                                    >  1:1357487/1‑150 (MQ=255)
                                                                                tctACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGt                                                                    >  2:357805/1‑150 (MQ=255)
                                                                                  tACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGt                                                                    >  1:548464/1‑148 (MQ=255)
                                                                                    cacaAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGAtt                                                               >  2:920196/1‑151 (MQ=255)
                                                                                    cacaAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGAtt                                                               >  1:1166972/1‑151 (MQ=255)
                                                                                       aaaCTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTAc                                                             >  1:1524749/1‑150 (MQ=255)
                                                                                       aaaCTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACa                                                            <  2:621073/151‑1 (MQ=255)
                                                                                             ttGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGtt                                                       <  2:1473476/150‑1 (MQ=255)
                                                                                               gctgcCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGc                                                    >  1:718370/1‑151 (MQ=255)
                                                                                                ctgcCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCt                                                   >  1:575790/1‑151 (MQ=255)
                                                                                                 tgcCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCt                                                   >  1:824042/1‑150 (MQ=255)
                                                                                                  gcCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTa                                                  <  1:1062946/150‑1 (MQ=255)
                                                                                                     gATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACAcc                                              >  2:1512703/1‑151 (MQ=255)
                                                                                                     gATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACAcc                                              >  2:1455477/1‑151 (MQ=255)
                                                                                                      aTCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCt                                             >  1:1249497/1‑151 (MQ=255)
                                                                                                         tGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCgc                                          >  1:1711956/1‑151 (MQ=255)
                                                                                                          gCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACAcc                                              <  2:487263/146‑1 (MQ=255)
                                                                                                          gCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCgct                                         >  2:589065/1‑151 (MQ=255)
                                                                                                            cGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCgcttg                                       >  2:91223/1‑151 (MQ=255)
                                                                                                             gggCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCgcttgc                                      <  2:493672/151‑1 (MQ=255)
                                                                                                                 aaaGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTcc                                  >  2:202638/1‑151 (MQ=255)
                                                                                                                  aaGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCg                                 >  2:1285978/1‑151 (MQ=255)
                                                                                                                   aGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCgg                                >  1:702725/1‑151 (MQ=255)
                                                                                                                      cATTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCGGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCg                              >  2:392680/1‑150 (MQ=255)
                                                                                                                       aTTACTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGAt                            >  1:42246/1‑151 (MQ=255)
                                                                                                                          aCTGTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGc                          >  2:1710398/1‑150 (MQ=255)
                                                                                                                             gTTAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAAc                       <  2:84358/150‑1 (MQ=255)
                                                                                                                               tAATCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTATAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCt                     <  1:262182/150‑1 (MQ=255)
                                                                                                                                aaTCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCtt                    <  2:555466/150‑1 (MQ=255)
                                                                                                                                aaTCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTc                   >  2:710085/1‑151 (MQ=255)
                                                                                                                                 aTCCAGTTCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTc                   >  1:239657/1‑150 (MQ=255)
                                                                                                                                        tCAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATCCCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACCCCTCGCTTGCTTCCGGCGATGCACCCTTCAccgccg            <  2:937916/150‑1 (MQ=255)
                                                                                                                                         cAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTg          >  1:810350/1‑151 (MQ=255)
                                                                                                                                         cAGAGCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTg          >  2:313684/1‑151 (MQ=255)
                                                                                                                                            agCACCATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAAc       >  2:154147/1‑151 (MQ=255)
                                                                                                                                                ccATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAACCCCAGCGAAGTAGATTACAACGTGGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTgg    <  2:696405/150‑1 (MQ=255)
                                                                                                                                                 cATCACTTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGAc  >  2:803590/1‑151 (MQ=255)
                                                                                                                                                       |                                                                                                                                                
CGGGCATTATCACCCTGCCAAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCAC‑TGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGAC  >  NC_000913/2807097‑2807391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑