| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 941,713 | 0 | T | G | 46.3% | 127.3 / 47.6 | 95 | V252G (GTG→GGG) | dmsA | dimethyl sulfoxide reductase, anaerobic, subunit A |
| Reads supporting (aligned to +/- strand): ref base T (8/43); new base G (44/0); total (52/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.08e-19 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCG > NC_000913/941564‑941861 | cGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTg < 2:1262788/151‑1 (MQ=255)cGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTg < 1:475317/151‑1 (MQ=255)cGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTg < 2:1048701/151‑1 (MQ=255) actactCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑Ac < 1:1236281/151‑1 (MQ=255) actCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTa < 2:217971/151‑1 (MQ=255) actCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTa < 1:1388147/151‑1 (MQ=255) ccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTAt < 1:520256/149‑1 (MQ=255) ccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGG‑GGTTTCTATCt > 2:706273/1‑151 (MQ=255) gcgcAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTCTCtt > 1:1544463/1‑150 (MQ=255) gcgcAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGG‑GCTTTCTa > 2:112305/1‑146 (MQ=255) cAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGG‑GCTTTCtttatt > 2:27563/1‑142 (MQ=255) aaaTTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTTCTATTTTTaa > 1:345348/1‑149 (MQ=255) tGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATTTTTAAAAgg > 1:161690/1‑149 (MQ=255) gCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCa < 1:1049299/150‑1 (MQ=255) gCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GGCTACTATATTTAACaag > 2:838132/1‑146 (MQ=255) cGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGG‑GCTTACTATCTTTAACa > 2:365470/1‑145 (MQ=255) ggAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATCTTTAAAAAGCCCGc > 2:768433/1‑151 (MQ=255) ttGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATCTTTAACAAGCACGCCAGaaa > 1:721974/1‑150 (MQ=255) ttGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATCTTTAAAAGGCACGCCCGaaa > 1:1330779/1‑150 (MQ=255) tGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAAt < 2:799819/150‑1 (MQ=255) gAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATc < 1:437872/150‑1 (MQ=255) gAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCt < 2:111032/151‑1 (MQ=255) aaCTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATTTTTAACAGGCACGCCAaaaa > 1:1126595/1‑147 (MQ=255) aaCTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GATTTCTATCTTTAAAAGGCACGCCCGAAAACt > 2:1303202/1‑150 (MQ=255) cTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GGTTACTATCTTTAAAAAGGACGCCCGAAAACTaa > 2:1008728/1‑150 (MQ=255) ataCCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATg < 2:205790/150‑1 (MQ=255) aCGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCAt < 1:1363426/151‑1 (MQ=255) ggcggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGa < 2:380956/151‑1 (MQ=255) cggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACATAATATCTTTAACAGGCACCCCAGAAAACTAATAccc > 1:213476/1‑143 (MQ=255) cggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGCGGGGGG‑TCATACAATGTTGAACAAGCACGCCCGAAATTTCATGCCCGCATgt > 2:1183735/1‑148 (MQ=255) ggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTTAACAGGCACGCCAGAAATCTAATGCCCGCATGatc > 1:431583/1‑150 (MQ=255) tGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATCTTGAACAAGCACGCCAGAAAACTAATGCCCGCATGatca > 2:639185/1‑148 (MQ=255) aGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGAt < 2:112684/151‑1 (MQ=255) aTGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTTCTATCTTTAAAAGGCACGCCAGAAAACTAATGCCCGCATGATCATCATCGATcc > 2:1420810/1‑151 (MQ=255) gCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTTAAAAAGCAACCCCGAAATTTAAAGGCCGCCTGATCAACATCGCTCcgc > 1:86273/1‑150 (MQ=255) aGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTATTATCTTTAACAGGCACGCCAGAAAACTAATGCCCGCATGATCATCATCGATCCGCGCta > 2:509201/1‑149 (MQ=255) aGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAAAGCCCCCATGATCATCATCGATCCGCGCtat > 1:533279/1‑150 (MQ=255) ccGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTAAAACCTTTAGCAAGCACGGCAGAAATCGAATTTCCCCATGAACGTCAATGTTCCCCGCgataac > 1:1737309/1‑148 (MQ=255) cGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGa < 1:618683/151‑1 (MQ=255) gTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTTAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCCCGCtataac > 1:1620851/1‑146 (MQ=255) cGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGacac < 2:213470/151‑1 (MQ=255) ggATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACAcc < 2:1297754/151‑1 (MQ=255) ggATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACAcc < 1:790744/151‑1 (MQ=255) ggATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTAATATCTTTAAAAAGCACGCCAGAAATCTAATGCCCGCCTGAACATCATCGATCCGCGCTATACCGACAcc > 2:347946/1‑151 (MQ=255) tatCGAAAACAGTAAGCTGGTAGTGCTGTTTGGT‑ATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATCTTGAAAAAGCACGCCCGAAAACTAATGCCCCCATGATCATCATCGATCCGCGCTATAACGACAcccg > 1:1530098/1‑147 (MQ=255) atCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGt < 1:1327810/150‑1 (MQ=255) atCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGt < 1:1507413/150‑1 (MQ=255) atCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGt < 2:946655/150‑1 (MQ=255) cGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑GCTTACTATCTTTAAAAGGCACGCCAGAAAACTAAAGCCCCCATGATCATCATCGATCCCCGCTATACCGCCACCgggggc > 2:944333/1‑147 (MQ=255) cGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATTTTGAAAAAGCACGCCAGAAATCTAATGCCCGCCTGATCATCATCGATCCGCGCCATACCGACACCgggg > 2:20371/1‑147 (MQ=255) gAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCCATAACGACACCGGGGcc > 1:1521601/1‑150 (MQ=255) gAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GATTACTATCTTTAACAAGCACGCCAGAAAACTAATGCCCGCCTGATCATCATCCATCCGCGCTATACCGACACCCGTGcc > 2:793089/1‑150 (MQ=255) aaaaCAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCgg < 2:440522/151‑1 (MQ=255) aaaCAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCggg < 2:155888/151‑1 (MQ=255) aGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTTAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCCACACCGGTGCCGGGcgcg > 1:495372/1‑151 (MQ=255) aGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGcgcg < 1:128739/151‑1 (MQ=255) aGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGcgcg < 2:1450125/151‑1 (MQ=255) aGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATTTTGAACAAGCACGCCAGAAAACTAATGCCCGCCTGATCATCCTCGATCCGCGCTATACCGACACCGGTGCCggggg > 2:1487577/1‑147 (MQ=255) aaGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGaa < 1:1444761/150‑1 (MQ=255) aGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATCTTTAAAAGGCACGCCCGAAATCTAAAGCCCGCACGATCATCATCGATCCGCGCCATACCCCCACCGGTGCCggg > 2:95398/1‑143 (MQ=255) gCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGACCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGAt < 2:563073/151‑1 (MQ=255) cTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTGAACAGGGACGCCCGAAAACTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCCGTGCCGGGGGCGAAGa > 1:85885/1‑149 (MQ=255) aGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTgg < 2:398528/151‑1 (MQ=255) aGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTTAAAAAGGACGCCAGAAAACTAATGCCCGCATGATCATCATCGATCCCCGCCATACCCACACCCGGGCCGGGGGCGAAGATGAGTgg > 1:69039/1‑151 (MQ=255) aGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATTCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGGGCCGGGCGCGAAGATGAGTgg > 1:509568/1‑151 (MQ=255) tGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTTAAAAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTgg > 1:311931/1‑149 (MQ=255) gCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGAt < 2:715635/150‑1 (MQ=255) gCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATc < 2:191910/151‑1 (MQ=255) gTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATCTTGAACAAGCACGCCCGAAATCTAATGCCCCCCTGATCATCATCGATCCGCGCCATACCGACACCCGGGCCGGGGGCGAAGATGAGGGGGTccc > 1:736390/1‑150 (MQ=255) gTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTTATATCTTTAAAAGGCACGCCCGAAAACTAATGCCCCCATGATCATCCTCCATCCCCGCTATACCCACACCGGTGCCGGGGGCGGAGATGAgggggaccc > 2:1590765/1‑145 (MQ=255) tttGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTAATATCTTGAAAAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGGGCCGGGCGCGGAGATGAGTGGATccc > 2:1062466/1‑149 (MQ=255) ttGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTTAACACGCACGCCCGAAAACTAATGCCCGCATGAACATCATCGATCCGCGCTATACCGACACCGGGGGCGGGGGCGAAGATGAGGGGGTccc > 2:879357/1‑148 (MQ=255) taataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGTAGTAATTAT‑TTTAACAGGCACGCCAGGAATATAAAGCGCGCCTGAGCATCCTCGAACCCCGCTCTACCGCCACCAGGGGCCGGCGCGAAAATAAGGGGATGCCTAtt > 2:352800/1‑148 (MQ=255) aataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑GCCTAATATCTTTAACAAGCACGCCAGAAAAATAAAGTCCCCCCGAACAACCTCGATCCGCGCTAAACCGACACCGGGGCCGGGCGGGAAAATGAGGGGAGCCCCAtt > 2:932159/1‑147 (MQ=255) aataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGt < 1:24980/150‑1 (MQ=255) aataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAAAAGGCACGCCCGAAAACTAATGCCCCCCTGATCATCATCGATCCGCGCCATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGt > 2:1544185/1‑150 (MQ=255) ataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTcc < 1:959141/151‑1 (MQ=255) aaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCg < 2:1620705/150‑1 (MQ=255) aaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTGAACAGGCACGCCAGAAAACTAATGCCCGCCTGATCATCATCGATCCGCGCTATAACCACACCCGGGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCgg > 1:427470/1‑151 (MQ=255) cccTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑AGTTTCTATCTTTAAAAGGCACGCCCGAAAACTAATGCCCGCCTGATCCTTATCGATCCGCGCTATACCCACACCGGGGCCGGGCGCGAAGATGAGGGGGTCCCCATTCGTCCggg > 2:74303/1‑150 (MQ=255) ccTGGCGAAACGCGAATGAGTGGCGGTGGGGGG‑GCTTTCTATCTTGAACAGGGCCGCCAGAAAACTAAAGGCCGCCTGATCATCCTCCATCCCCGCTATAACCACACCGGGGCCGGGCGCGGAGAAGGGTGGGGCCCTATTCGTCCggg > 2:1452626/1‑149 (MQ=255) gCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGa < 1:631467/151‑1 (MQ=255) gAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATg < 1:1475701/151‑1 (MQ=255) aaaCGCGAATGAGTGGCGGTGGGGGG‑GCTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCCGTGCCGGGCGCGAAGAAGAGTGGGTCCCTATTTGTCCGGGAACAGa > 1:1199239/1‑148 (MQ=255) cgcgAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGc < 1:639208/151‑1 (MQ=255) cgAATGAGTGGCGGTGGGGGG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGGGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCAc > 1:135018/1‑151 (MQ=255) aaTGAGTGGCGGTGGGGGG‑ACTTACTATCTTTAACAGGCACGCCAGAAAACTAATGCCCGCATGATCATCATCGATCCGCGCTATACCCACACCCGGGCCGGGCGCGAAGATGAGTGGATCCCTATTCCTCCGGGGACAGAAGCCGCACTg > 2:1190406/1‑151 (MQ=255) aTGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTgg < 2:1661889/151‑1 (MQ=255) aTGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTgg < 1:1151703/151‑1 (MQ=255) ggCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAAc < 2:161685/150‑1 (MQ=255) ggCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACg > 2:713757/1‑151 (MQ=255) cGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGt < 1:1541724/151‑1 (MQ=255) cGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGt < 2:1406702/151‑1 (MQ=255) ggTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTc > 1:1709741/1‑151 (MQ=255) ggTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCg < 1:354814/151‑1 (MQ=255) | CGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTG‑ACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCG > NC_000913/941564‑941861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |