Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4350CT42.5% 106.8 / 62.1 94intergenic (‑179/‑28)ttdR/ttdAtranscriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base C (8/46);  new base T (40/0);  total (48/46)
Fisher's exact test for biased strand distribution p-value = 6.70e-19
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAA  >  NC_000913/3206289‑3206583
                                                                                                                                                  |                                                                                                                                                     
gtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAg                                                                                                                                                    <  1:306786/150‑1 (MQ=255)
    ttCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACaa                                                                                                                                                <  1:656679/150‑1 (MQ=255)
      cGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATa                                                                                                                                             <  2:535498/151‑1 (MQ=255)
      cGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATa                                                                                                                                             <  1:1230304/151‑1 (MQ=255)
      cGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACaaa                                                                                                                                               >  2:1349790/1‑149 (MQ=255)
       gCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAc                                                                                                                                            <  2:1753998/151‑1 (MQ=255)
       gCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAc                                                                                                                                            <  1:673376/151‑1 (MQ=255)
        cAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTTAATTTTTTTAGACaaaaa                                                                                                                                             >  2:1733026/1‑147 (MQ=255)
        cAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACaaa                                                                                                                                               >  2:800389/1‑147 (MQ=255)
         aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACa                                                                                                                                          >  2:99337/1‑150 (MQ=255)
           aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCACACAaaaaaaaa                                                                                                                                        >  2:738725/1‑150 (MQ=255)
            aCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCTCACGAAAACaaaa                                                                                                                                       >  1:553749/1‑150 (MQ=255)
             cATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGAcaaaaacaaaaa                                                                                                                                      >  1:261248/1‑150 (MQ=255)
                tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATAAAAAAAATgg                                                                                                                                  >  1:123680/1‑151 (MQ=255)
                tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAACttg                                                                                                                                  >  1:1683702/1‑149 (MQ=255)
                tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTg                                                                                                                                   <  2:1007584/150‑1 (MQ=255)
                 gCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTgg                                                                                                                                  <  2:414158/150‑1 (MQ=255)
                   cATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGt                                                                                                                               <  1:963241/151‑1 (MQ=255)
                      tCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCGCATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTg                                                                                                                             <  2:1488945/150‑1 (MQ=255)
                      tCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTg                                                                                                                             <  1:840813/150‑1 (MQ=255)
                         cTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATAAAAAAACTGGAGGTgtcct                                                                                                                         >  2:880439/1‑147 (MQ=255)
                              ctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatgat                                                                                                                      <  2:291540/149‑1 (MQ=255)
                               tGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGTATTTTTTCAGACAAATACAAAAAAAGGAGTTGCCatgat                                                                                                                      >  1:659416/1‑148 (MQ=255)
                                  cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGAGGTGGCATGATGAggg                                                                                                                 >  1:1663697/1‑148 (MQ=255)
                                   gcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATTTTTTAGAAAAAAAAAAAAAATGGAGTTGGCATGATGAGCg                                                                                                                 >  2:1672052/1‑149 (MQ=255)
                                    cAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGaaa                                                                                                              <  1:252130/151‑1 (MQ=255)
                                    cAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGaaa                                                                                                              <  2:1341575/151‑1 (MQ=255)
                                        attcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaa                                                                                                          <  1:1345474/151‑1 (MQ=255)
                                           cattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaataa                                                                                                       <  2:721938/151‑1 (MQ=255)
                                              tcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAAACAAATAAAAAAAATGGAGTTGTCCTGATGGGCGAAAGgaa                                                                                                          >  2:459930/1‑145 (MQ=255)
                                                ttATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAAACAAAAACAAAAAAAGGAGGTGGCATGGTGAGGGAAAGtaataaaaaa                                                                                                   >  2:1577424/1‑146 (MQ=255)
                                                  aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATAAAAAAAATGGAGGTGCCATGATGAGCGGAAGGAAAAAacaaca                                                                                                 >  1:97170/1‑150 (MQ=255)
                                                  aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAg                                                                                                <  2:53523/151‑1 (MQ=255)
                                                   ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGAGGTGGCCTGATGAGGGaaaagaaaaaaaaaaa                                                                                                 >  1:82716/1‑136 (MQ=255)
                                                    tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                               <  2:252883/150‑1 (MQ=255)
                                                         cgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCCGACAAAAAAAAAAACAGGGGGTTCCCTGGTGAGCGAAAAGAATAAACaaaaaggaggg                                                                                          >  1:934799/1‑141 (MQ=255)
                                                            tGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAAt                                                                                       <  2:1762080/150‑1 (MQ=255)
                                                             gATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATa                                                                                      <  1:113691/150‑1 (MQ=255)
                                                              aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAACAAAAAATGGGGTTGCCATGATGGGGGAAAAGAAAAAacaacaaggaggggata                                                                                      >  2:1382941/1‑138 (MQ=255)
                                                                tCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGt                                                                                   <  1:434741/150‑1 (MQ=255)
                                                                  aCGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGa                                                                                <  1:151609/151‑1 (MQ=255)
                                                                    gAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACa                                                                              <  1:994545/151‑1 (MQ=255)
                                                                    gAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAAAAAAAAATGGAGGTGCCATGATGAGGGAAAGGAATAAGAAAAAAGCAGGGAATAAGtt                                                                                  >  1:280281/1‑147 (MQ=255)
                                                                       cTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAAAACAAAAAATGGAGGTGGCATGATGAGCGAAAGGAATAAACAACAAGCAGGGAATAAATTGACa                                                                              >  1:431742/1‑148 (MQ=255)
                                                                         gTTAATTACATATTCACGGTGGCAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAt                                                                         <  2:1273115/150‑1 (MQ=255)
                                                                           tAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGAGGTGCCATGATGAGGGGAAGAAAAAAACAAAAGGCAGTGGATAAATTGaaa                                                                              >  1:134814/1‑142 (MQ=255)
                                                                            aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGAATTTTTTCACAAAAAAAAAAAAACAGGGGTTGGCAAGATGAGCGCAAGAAATAAAAAAAAAGCAGTGAAAAAATTGATAGAGAGTg                                                                       >  2:1214560/1‑150 (MQ=255)
                                                                                aCATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGc                                                                   <  1:1496481/150‑1 (MQ=255)
                                                                                  atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACAAAAAATGGAGGTGCCATGATGAGCGAAAGAAAAAAACAACAGGCAGTGAATAAGATGACAGAGATTGTCGCTa                                                                 >  1:902667/1‑150 (MQ=255)
                                                                                  atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTaa                                                                <  2:769486/151‑1 (MQ=255)
                                                                                  atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAACAAAAACTTGAGTTGGCCTGATGAGCGGAAAGAATAAAAAACAAACAGAGAAAAAAATTACAGAGATTGTTGCTa                                                                 >  2:842378/1‑150 (MQ=255)
                                                                                   tatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAAAAAAAAAAATGGAGGTGCCCTGATGAGCGAAAGTAATAAACAAAAGGCAGGGAATAAATTTAAAGAGATTGTTGCTaa                                                                >  1:822579/1‑150 (MQ=255)
                                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAAAACAAAAAATGGAGTTGCCATGATGAGGGAAAGTAATAAACAAAAAGCAGGGAATAAATTTACAGAGATTTTTGCTaa                                                                >  2:1557430/1‑149 (MQ=255)
                                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAAc                                                               <  1:440624/150‑1 (MQ=255)
                                                                                      tCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAACAAAAAATTGAGTTGGCCTGATGAGCGAAAAGAATAAACAAAAAGCAGTGAATAAAATGACAGAGAATGTCGCTAAAttt                                                            >  2:471766/1‑151 (MQ=255)
                                                                                       cACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAACTGGAGTTGGCATGATGAGCGAAAGTAATAAACAACAAGCAGGGAATAAGTTGACAGAGATTGTCGCTAACttt                                                            >  1:650796/1‑150 (MQ=255)
                                                                                        aCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTAc                                                          <  2:1756444/151‑1 (MQ=255)
                                                                                         cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCACAAAAAAAAAAAAAATTGGGTTGCCCTGATGAGCGGAAATAAAAAACAAAAAGGAGGGAATAAATTGAAAGAGATTGTCGCCAACttttac                                                         >  1:1005709/1‑148 (MQ=255)
                                                                                         cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACCAAAACAAAAACAGGAGTTGTCCTGATGAGGGGAAAGAATAAACAACAAGGAGTGGATAAATTGAAAGAGAATTTCGCTAACTTTAcc                                                         >  1:1691033/1‑151 (MQ=255)
                                                                                         cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTAcc                                                         <  2:1287966/151‑1 (MQ=255)
                                                                                          ggTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCg                                                        <  1:1465800/151‑1 (MQ=255)
                                                                                            tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAAAACAAAAAATGGAGGTGGCATGATGAGGGAAAGGAATAAACAAAAAGCAGGGAATAAGTTGACAGAGATTGTCGCTAAATTTACCGcc                                                      >  1:368770/1‑151 (MQ=255)
                                                                                            tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTTAGACAAATAAAAAAAATGGAGTTGGCATGATGAGCGGAAGGAATAAACAAAAAGCAGTGAATAAATTGACAGAGATTGTCGCTAACTTTACCGcc                                                      >  2:482432/1‑151 (MQ=255)
                                                                                             ggCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa                                                     <  1:1126813/151‑1 (MQ=255)
                                                                                                aaaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTACCTTTACCGCCATg                                                   <  2:896452/150‑1 (MQ=255)
                                                                                                  aaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAAACAAAAAAAAAAAATGGAGGTGCCATGATGAGGGAAAAGAAAAAACAAAAAGCAGTGAAAAAGATGAAAGAGGTTGTTGCTAAATTTTCCGCCATGAtt                                                >  2:1235990/1‑151 (MQ=255)
                                                                                                   aaaTATAAACCCACATTTTTAGTGGTATTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGCCGCTAACTTTACCGCCATGAttt                                               <  2:494759/151‑1 (MQ=255)
                                                                                                   aaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTTGATTTTTTCCGACAAAAACAAAAAATTGGGGTTGCCAGATGAGGGACAGGAATAAACAAAAGGCAGGGAATAAGATGAAAGAGATTTTTGCTTACCTTATCGCCACGActt                                               >  2:1302090/1‑151 (MQ=255)
                                                                                                   aaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAATACAAAAACTGGAGGTGCCATGATGAGCGGAAGTAATAAACAACAGGCAGGGAATAAAGTGACAGAGATTGTTGCTAAATTTACCGCCCTGAttt                                               >  1:19019/1‑151 (MQ=255)
                                                                                                     atatAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAAAGGAGGTGCCATGATGAGAGAAAGGAATAAAAAAAAGGGAGGGAATAAATTTACAGAGATTGTTGCTCAATTTTCCGCCATGAttttt                                             >  1:1274468/1‑149 (MQ=255)
                                                                                                     atatAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAACAAAATAAAAAAAAAGGGATTGGCCTGATGAGGGGAAGGAAAAAACAAAAAGGCGTGAAAAAATTGACAGAGAATGTCGCTAACCTTACCCCCCTGATTTCt                                             >  2:159855/1‑151 (MQ=255)
                                                                                                       ataAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAAAAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTACCTTTACCGCCATGATTTCTAc                                           <  2:1640386/151‑1 (MQ=255)
                                                                                                         aaaaCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGAGGTGCCATGATGAGCGGAAGAAATAAACAAAAAGCAGGGAATAAAATGACAGAGATTGTCGCTAAATTTACCGCCCTGATTTTTAccc                                         >  1:241422/1‑151 (MQ=255)
                                                                                                          aaaCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAAAAAAAAAAATTGGGGTGCCATGGTGAGGGGAAATAATAAACAACAAGCAGGGGATAAGATGACAGAGAATGTCGGTCAATTTTCCCCCCTGATTTCTAccc                                         >  1:271948/1‑150 (MQ=255)
                                                                                                             ccACATTTTTAGTGGTATTTTGTGGCGGTAAATTTTCCCAGACAAAAAAAAAAACTGGAGTTGCCAGGATGAGCGAAAGAAATAAGCAACAGGCAGTGAATAAGTGGAAAGAGTTTGTCGCAAACTTTACCGCCATGATTTCTACCCGAAt                                     <  2:1422008/151‑1 (MQ=255)
                                                                                                                    tttAGTGGTAGTTTGTGGCGGTGGATTTTTTCAGACAAAAAAAAAAAATGGGGGTGCCATGATGAGGGGAAGGAATAAGCAACAGGGAGGGAAAAAATTGAAAGAGATTGTCGCCAACCTTTACGCCCTGATTTTTAACCGAAAGcc                                  >  1:1621018/1‑147 (MQ=255)
                                                                                                                     ttAGTGGTAGTTTGGGGCGGTGAATTTTTCCAGACAAATAAAAAACCTGGAGTTGCCATGATGAGCGAAAGTAAAAAGCAACAGGCAGTAAATAAGTGGACAGAGATGGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCtgat                              <  2:279107/150‑1 (MQ=255)
                                                                                                                         tGGTAGTTTGTGGCGGTGAATTTTTCCAGAAAAATACAAAAACTGGAGTTGCCATGAGGAGCAAAAGTAAAAACCAACAGGCAGTAAATAAGTTGAAAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGAc                           <  2:1343648/149‑1 (MQ=255)
                                                                                                                          ggTAGTTTGTGGCGGTGAATTTTTCAAGACAAATACAAAAACGGGAGTTGCCATGATGAGCGAAAGTAATAACCAACAGGCAGTAAATAATTTGACAGAGTTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgt                         <  2:1581972/150‑1 (MQ=255)
                                                                                                                               tttGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCAATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGAAAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtgg                       <  2:612522/147‑1 (MQ=255)
                                                                                                                                  gtgGCGGTGATTTTTTCAAGACAAATAAAAAAACGGGAGTTGCAATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGTTTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGAt                  <  2:300850/149‑1 (MQ=255)
                                                                                                                                   tgGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATaa                >  2:918663/1‑150 (MQ=255)
                                                                                                                                   gtgggggtaaTTTTTCCAGAAAAATACAAAATCTGGAGTTGCCATGATGAGTGAAAGAAATAACCAACAGGAATTAAATAAGTTGACAGATTTTGTCGCAATCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGAt                  <  2:1589759/140‑1 (MQ=255)
                                                                                                                                    ggCGGTGAATTTTTCCAGAAAAATAAAAAACCTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAc              <  1:800427/151‑1 (MQ=255)
                                                                                                                                      cGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACt             >  1:1670232/1‑150 (MQ=255)
                                                                                                                                       ggTGAATTTTCCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTa            <  1:738758/150‑1 (MQ=255)
                                                                                                                                       ggTAAATTTTACCAGAAAAAAACAAAAACGGGAGTTGCCATGATGAGCAAAAGAAAAAAGCAACAGGCAGTGAATAAGTGGAAAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTa            <  2:350639/150‑1 (MQ=255)
                                                                                                                                        gTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa           >  1:1124638/1‑150 (MQ=255)
                                                                                                                                        gTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa           >  2:1061618/1‑150 (MQ=255)
                                                                                                                                           aaTTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAAc        >  1:1677170/1‑150 (MQ=255)
                                                                                                                                            aTTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAAc        >  2:1226045/1‑149 (MQ=255)
                                                                                                                                             tttttCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGc     >  2:425650/1‑151 (MQ=255)
                                                                                                                                             tttttCCAGAAAAATACAAAAACGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAg      <  2:298624/150‑1 (MQ=255)
                                                                                                                                              ttttCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGTTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGc     <  1:335420/150‑1 (MQ=255)
                                                                                                                                                  ccAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTaa  >  2:1766504/1‑149 (MQ=255)
                                                                                                                                                  ccAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTaa  >  2:1499320/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
GTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAA  >  NC_000913/3206289‑3206583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: