| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,133,857 | 0 | A | G | 41.3% | 106.2 / 22.2 | 75 | Q19R (CAG→CGG) | flgF | flagellar component of cell‑proximal portion of basal‑body rod |
| Reads supporting (aligned to +/- strand): ref base A (40/4); new base G (0/31); total (40/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.61e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGTAACTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCGGGCGC > NC_000913/1133707‑1133992 | gCGTAACTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACa < 1:1156995/151‑1 (MQ=255)gCGTAACTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACa < 1:808589/151‑1 (MQ=255) gTAACTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAgg > 1:818906/1‑151 (MQ=255) tAACTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGc > 2:453630/1‑151 (MQ=255) tAACTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGc > 2:1057764/1‑151 (MQ=255) cTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGt > 1:84496/1‑151 (MQ=255) tATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGt > 2:1363347/1‑150 (MQ=255) ccAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCt > 2:1006155/1‑151 (MQ=255) aGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTgg > 2:897701/1‑151 (MQ=255) aaaaCCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGcc > 1:60480/1‑151 (MQ=255) aaCCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTc > 1:509798/1‑151 (MQ=255) aaCCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTc > 2:1262430/1‑151 (MQ=255) aCCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTc > 1:536581/1‑150 (MQ=255) ccccGGACCAGATCCTAAACTCGTTGGTAAACTTCCCCTAATGGCTGAGGGGAAAGCCCATGGAA‑TCACGAATTTTATCCGGCGAGGGGGGCGGCCGGCCAGACTCTGAACA‑AACAGGGGGAAACCGCCAGTAATCTGGCCAATGCCTCaa < 2:106538/151‑1 (MQ=255) gATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGttt > 2:561651/1‑151 (MQ=255) gATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGttt > 1:473471/1‑151 (MQ=255) cccaaaCCCGCTGTTTACCTTCCGCTAACCGCTGAGGGAATAGCTAAATGGA‑CCCCTCATTTTATCCCGGGGGGGGAGCACCCAGCCAGACCCTAAAAC‑AAGGGGCGATAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTc < 1:910345/146‑1 (MQ=255) ctaaaCGCGTTGTTTAACTTGCCTTAACCGCGGACGGGAGATCT‑AAGGGATTCACGCATTTTATCCCGGGAGGGGAACACCCACCCAGACACGAAAAC‑AACGGGGGGAAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTcg < 2:774332/147‑1 (MQ=255) cccAACCCGGTGTTTACCTTACGATAACCGCGGAGGGGAAAGCTCAAGGGA‑TCACGAATTTTACCCCGGGAGGGGAGCAGCCACCCAGACCCTAAAAA‑AACGGGGGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTcgc < 2:1205054/149‑1 (MQ=255) cTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTcgc > 1:1312061/1‑151 (MQ=255) tCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTcgcg > 1:1418781/1‑151 (MQ=255) cAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTcgcgc > 1:1430273/1‑151 (MQ=255) aaCACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTcgcgcg > 2:319518/1‑151 (MQ=255) cacGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCgcgcgc > 2:231359/1‑150 (MQ=255) cGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGt > 2:58233/1‑151 (MQ=255) gCTGTTTAACTTACGCTAACGGCGGAGGGGATAGCTCAATGGA‑TCCCGCAATTTATCCCGCGATGGGAGCACCCAGCCAGACACTGAATC‑AACGGGGGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGtt < 1:809330/151‑1 (MQ=255) tGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTg > 2:864201/1‑150 (MQ=255) gtttACCTTACGCAAATCGCTGAGGGGATAGCTAAAGGGA‑TCACGAATTTTATCCCGGGAGGGGAGCGCCCAGCCAGACCCAAAATC‑AACGGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCgcgcgc < 1:517637/142‑1 (MQ=255) ggTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGa > 2:672859/1‑150 (MQ=255) ggTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGa > 2:648337/1‑150 (MQ=255) taactttaccatAACCGCTGGCGGGATACCTAAAGGGA‑CCCCGAATTTTATCCCGGGGGGGGAGCAGCCAGCCAGACACTAAAAC‑AACGGGGGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGtt < 2:1065518/135‑1 (MQ=255) aaCTTCCGCAAACCGCTGGGGGGAAAGCTCAAGGAA‑TCACGAATTTTACCCCGGGGGGGGGCCGGCCAGCCAGACACTGAAAC‑AAGGGGGGTTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGc < 2:1384485/150‑1 (MQ=255) aaCTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCt > 2:124496/1‑151 (MQ=255) ttACCCAAATCGCGGAGGGAATAGCTAAATGAA‑TCACCAATTTTACCCGGGGGGGGGAGCACCCACCCAGACACTAAACC‑AACGGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCttt < 2:1436413/150‑1 (MQ=255) tACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTAc > 1:62853/1‑151 (MQ=255) cgtaaaTCGGTGAGGGGATACCTAAAGATA‑TCACGAATTTTATCCCGGGAGGGGACCGCCCACCGAGACACTAAATC‑AACGGGCGTTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTAc < 1:1355756/145‑1 (MQ=255) gCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTAcgcg > 1:689188/1‑151 (MQ=255) tAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTAcgcgcg > 2:675309/1‑151 (MQ=255) aaccgcgggggggATAGCTAAATGGA‑TCACAAATTTTATCCCGCGAGGGGAACACCCAGCCAGACACTAAAAC‑AACGGGGGGAAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTAcgcg < 1:1363312/138‑1 (MQ=255) aaTCGCTGAGGGGATAGCTAAATGGA‑TCACGCAATTTATCCCGCGAGGGGAGCAGCCAGCCAGACACTAAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTAcgcg < 2:36965/148‑1 (MQ=255) aaTCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCgg > 2:1375752/1‑151 (MQ=255) cGCTGGGGGGTTGGCTCAATGGA‑TCACGCATTTTACCCCGCGAGGGGAGCAGCAACCCAAACACTAAACC‑AACGGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCttt < 2:1224298/140‑1 (MQ=255) tGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGaa > 1:413326/1‑131 (MQ=255) aCGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTg > 2:113174/1‑151 (MQ=255) gggATAGCTCAATGAC‑CCACACAATTTATCCCGGGGGGGGGGCACCCACCCAGACACTGAACC‑AACGGGGGTAAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCa < 1:424975/146‑1 (MQ=255) gggATAGCTAAATGGA‑TCACGAATTTTATCCCGCGATGGGAGCAGCCAGCCAGACACTAAAAC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTg < 2:79550/149‑1 (MQ=255) cAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTtc > 2:403131/1‑151 (MQ=255) aaaTGTA‑CCACGAATTTTACACCGCGAGGGGAGCAGCCACCAAGACACAGAACC‑AGCGGGGGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTtc < 1:114427/150‑1 (MQ=255) aaTGAA‑TCCCCCATTTTATCCCGGGAGGGGACCACCCACCCACACCCTGAATC‑AACGGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTtc < 2:1135415/150‑1 (MQ=255) tGGA‑TCACGCACTTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTtctc > 2:866491/1‑150 (MQ=255) gggA‑CCACGAAATTTATCCCGCGAGGGGGGCAGCCACCCAGACACTAAAAC‑AGCGGGCGGAAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTtctc < 1:374257/149‑1 (MQ=255) ggA‑CCACGAATTTTATCCGGCGAGGGGAGCAGCCAGCCAGCCACTGAATC‑AAGGGGGGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTctct < 2:954215/150‑1 (MQ=255) gA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGc > 1:703795/1‑151 (MQ=255) gA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGc > 2:529341/1‑151 (MQ=255) cgaaaTTTATCCGGCGAGGGGAGCAGCAAGCCAGCCACTGAACC‑AACGGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGccc < 1:791225/145‑1 (MQ=255) gCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCAcgc > 2:1051481/1‑151 (MQ=255) tttATCCGGCGGGGGGACCAGCCAGCCAGACACTAAACA‑AACGGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCAcgc < 1:911656/147‑1 (MQ=255) tttATCCCGGGGGGGGAGGACCCAGCAAGCAACTAAACA‑AACGGGGGGAAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACgcgc < 1:251620/149‑1 (MQ=255) ttATCCCGCGAGGGGAGCAGCCAGCCAGACCCGGAATC‑AACGGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCAc < 2:214409/150‑1 (MQ=255) ttATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACg > 1:1307886/1‑151 (MQ=255) tataCCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGt > 2:1099015/1‑151 (MQ=255) ccggggagggggGCACCCAGCCAGACA‑TGAAACAAACGGGGGGAAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGtt < 2:1111972/141‑1 (MQ=255) aCCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTgg > 2:1454268/1‑151 (MQ=255) cggggaggggAGCCGCCACCAAGACACTAAACC‑AGCGGGGGGAAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGt < 1:1049549/144‑1 (MQ=255) ccGCGAGGGGAGCAGCCAGCCAGACACTGAATC‑AACGGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGtt < 1:176703/148‑1 (MQ=255) ccGCGAGGGGAGCACCAAGCCAAATACAAAAAC‑AACGGGCGAAACCCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTgg < 2:192013/150‑1 (MQ=255) gggAGCACCCAGCAAGACACAAAATC‑AACGGGGGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTc < 2:1430313/145‑1 (MQ=255) agcagcCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTc > 2:522810/1‑150 (MQ=255) ccagccagACCCGAAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCa < 1:561635/146‑1 (MQ=255) ccagccagACACTGAATA‑AACGGGCGGAAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAAc < 2:1270855/148‑1 (MQ=255) ccagccagACACTAAACC‑AACGGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCa < 2:619568/146‑1 (MQ=255) ccacccacACACGAAACC‑AACGGGCGTTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAAc < 1:1215558/148‑1 (MQ=255) gccagACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCGGTGGAAAGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCgg > 2:156985/1‑150 (MQ=255) ccagCCACTAAACC‑AACGGGCGGTACCCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCgg < 2:1363378/149‑1 (MQ=255) ccagACACTAAATC‑AAGGGGCGGTACCCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCggg < 1:897678/150‑1 (MQ=255) acTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCGGgcgc > 1:1166539/1‑147 (MQ=255) ctaaacc‑AACGGGCGTTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCGGgc < 2:820729/138‑1 (MQ=255) | GCGTAACTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAATCGCTGACGGGATAGCTCAATGGA‑TCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATC‑AACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCGGGCGC > NC_000913/1133707‑1133992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |