Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091329,4960TA49.4% 87.6 / 65.9 89intergenic (+301/‑155)dapB/carAdihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
Reads supporting (aligned to +/- strand):  ref base T (39/6);  new base A (0/44);  total (39/50)
Fisher's exact test for biased strand distribution p-value = 3.47e-19
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAGGG  >  NC_000913/29349‑29646
                                                                                                                                                   |                                                                                                                                                      
aaTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATaa                                                                                                                                                      <  1:1115305/150‑1 (MQ=255)
 aTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATaaa                                                                                                                                                     >  1:258721/1‑150 (MQ=255)
   gTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATaaaaaa                                                                                                                                                  <  1:825216/151‑1 (MQ=255)
      aaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATcc                                                                                                                                               <  1:472501/151‑1 (MQ=255)
       aTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATccc                                                                                                                                              <  2:1004493/151‑1 (MQ=255)
          ttGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGcc                                                                                                                                           >  1:210588/1‑151 (MQ=255)
             aCCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCAtt                                                                                                                                        >  2:1400720/1‑151 (MQ=255)
              ccATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCAtt                                                                                                                                        >  2:1419792/1‑150 (MQ=255)
                aTTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTa                                                                                                                                       >  2:593232/1‑149 (MQ=255)
                  ttGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGtt                                                                                                                                   >  2:784965/1‑151 (MQ=255)
                     gTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGAc                                                                                                                                >  2:337962/1‑151 (MQ=255)
                        cACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACttt                                                                                                                             >  2:1094840/1‑151 (MQ=255)
                           ttttttCTGCTCTTTTTTTTTCCATGAAATTTTCTTCCTGCGCAGGCTTTTCCAAGAACAGTTAAGATGATTTTTTTGTCGCTTAATGCTTGAAAAAAATGCATGAGCCACAAAATAAAATAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                                            <  2:526710/149‑1 (MQ=255)
                            tttttCTCCTCTTTTTTATTTAATGCAATTTTTTTGCTGCGAAAGCTTTTTCCAGAACAGGTTAGATGATTTTTTTGTCGTTTAATCCCTGAAAAACATGCAGGAGCCAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAg                                                                                                                          <  2:117591/150‑1 (MQ=255)
                             ttttCTGCTTTTTTTTATTTCATGATTTTTTTTTGCTGCGCAAGTTTTTACAAAAACTGTTAAAATTATTTTTTTTTCGCTTATTCCTTAAAAAAAATGCAGGGCCCAAAAAAAATTAAAAAAAATCCCGCCATTAAGTTGACTTTTAgc                                                                                                                         <  1:305569/150‑1 (MQ=255)
                              tttCTCCTTTTTTTTATTTCATACAATCTTTTGGCTGCGCAAGCTTTTACAAAAACAGTTTAAATATTTTTTTTGTCTTTTAATCCCTAAAAAACATGAATGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAgcg                                                                                                                        <  1:784947/150‑1 (MQ=255)
                                 cTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGccc                                                                                                                     >  1:330864/1‑150 (MQ=255)
                                    ctctTTTTTTTTTCATGCATTTTTCTTGCTGCGCAAGCTTTTCCAAAAACAGGTTAGATGTTTTTTTTGTCGTTTAATGCTTTAAAAACATGCATGACCCAAAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCata                                                                                                                  <  1:115823/150‑1 (MQ=255)
                                      cGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtc                                                                                                                >  1:670424/1‑150 (MQ=255)
                                       gTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                                              >  1:1234596/1‑151 (MQ=255)
                                       gTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                                              >  2:773392/1‑151 (MQ=255)
                                       gTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                                              >  2:14084/1‑151 (MQ=255)
                                        tttttATTTCATGCATTCTTCTTGCTGCGCAAGCGTTTTCAAGAAAAGTTTAGATGATTTTTTTGTCGTTTAAGGCCTTAAAAACATGCATGAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                                              <  2:751048/150‑1 (MQ=255)
                                        tttttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAAAACAGGTTAGATGATTTTTTTGTCGCTTAATGCCTGAAAAACATGCATGAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCata                                                                                                                  <  2:145/146‑1 (MQ=255)
                                        tttttATTTCATAAATTTTTCTTGCTGCGAAAGCTTTTCCAAAAACGGTTTAGATTATTTTTTTGTCGCTTAATCCTTATAAAACATGCAGGACCCAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCatat                                                                                                                 <  1:1169868/147‑1 (MQ=255)
                                           ttttttCATACATTTTTTTGGCGGCGAAAGCTTTTCCAAAAACAGTTTAGATAATTTTTTTGTCGTTAAATCCTTAAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAg                                                                                                           <  1:1224564/147‑1 (MQ=255)
                                            tATTTAATGAATTTTTTTTCCTGCGAAAGCTTTTCCAAAAAAAGGTAAGATGATTTTTTTGTCTTTAAATGCCTAAAAAACATGCAGGAGCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGa                                                                                                          <  1:606077/150‑1 (MQ=255)
                                              tttCATACATTCTTTTTGCTGCAAATGGTTTTCCCAAAACAGTTTAGATGTTTTTTTTGTCGCTAAATCCTTAAAAAACTTGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                                        <  2:1449876/150‑1 (MQ=255)
                                                 cATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccg                                                                                                    >  1:8934/1‑151 (MQ=255)
                                                  aTGCATTCTTCTTGCTGCGCAAGCTTTTCCAAAAACAGGTTAGATGATTTTTTTGTCGTTTAATGCCTAAAAAACATGCATGACCCAAAAAATAATAAAAAAATCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgcc                                                                                                     <  2:258730/149‑1 (MQ=255)
                                                  aTGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccgc                                                                                                   >  1:16794/1‑151 (MQ=255)
                                                    gCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGccgccg                                                                                                 >  2:29801/1‑151 (MQ=255)
                                                           tcttGCTGCGCAACCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                           >  1:910766/1‑150 (MQ=255)
                                                             ttGCTGCGAAAGTTTTTCCAAAAACAGTTTAAATTTTTTTTTTGCCGTTTAATGCTTAAAAAACAGGCATGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAg                                                                                         <  1:948785/150‑1 (MQ=255)
                                                                 tgcGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAAtt                                                                                    >  1:297573/1‑151 (MQ=255)
                                                                    gcAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                                                 >  2:294760/1‑151 (MQ=255)
                                                                    gcAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                                                 >  1:1205311/1‑151 (MQ=255)
                                                                      aaGCTTTTCCCAAAAAAGGTAAAATGATTTTTTTGTCGTTTAGTCCCTAAAAAACATGCAGGACCCAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAAt                                                                                     <  1:964379/145‑1 (MQ=255)
                                                                      aaGCGTTTCCAAAAACAGGTTAAATGTTTTTTTTGTCGTTTAATGCCTGTAAAACATGCAGGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGa                                                                                        <  2:93167/142‑1 (MQ=255)
                                                                      aaGCGTTTACCAAAAAGGTTTAGATTATCTTTTTGTCGTTTATTGCCAGTAAAACATGCATGGACCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                                                 <  1:1076032/149‑1 (MQ=255)
                                                                       aGCTTTTTCAAAAAAAGTTTAGATGTTTTTTTTGTCGTTAAATCCCTAAAAAACATGCATGGCCCAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCgg                                                                              <  1:34862/151‑1 (MQ=255)
                                                                        gCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGt                                                                             >  2:984113/1‑151 (MQ=255)
                                                                           ttttCAAAAACAGTTTAGATGATTTTTTTTTCGTTTAATCCTTAAAAAACATGCATGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGt                                                                             <  1:168790/148‑1 (MQ=255)
                                                                            tttCCAGAACAGTTTAGATGTTTTTTTTGTCGTTTATTCCCTGAAAAACTTGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAg                                                                          <  2:1393191/150‑1 (MQ=255)
                                                                                cAGAACAGGATAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAg                                                                          >  2:1221843/1‑146 (MQ=255)
                                                                                 aaaaaggtttAGATGTTTTTTTTGTCGTTTAATGCTTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAg                                                                       <  2:987439/140‑1 (MQ=255)
                                                                                 aaaaCAGGTAAAATAATTTTTTTTTGGATAATTGCATGAAAAACTTCCATGACCAAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGa                                                                      <  1:142017/147‑1 (MQ=255)
                                                                                 aGAACAGGTTAGATGTTTTTTTTGTCGTTTAATGCCTGAAAAACATGCATGACCCACAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAt                                                                     <  1:319237/150‑1 (MQ=255)
                                                                                   aaaaGGTTAGATGATTTTTTTGTCTTTTAATGCCTAAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAttt                                                                   <  1:142240/147‑1 (MQ=255)
                                                                                    aCAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGACATTCGTCGGTAAGCAGATTTGc                                                                 >  1:898960/1‑151 (MQ=255)
                                                                                      aGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAt                                                               >  1:1217899/1‑151 (MQ=255)
                                                                                       ggTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                              >  1:346743/1‑151 (MQ=255)
                                                                                         ttaaatattttttttGTCGTTTAATGCCTAAAAAACATGCATGACCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCa                                                                <  1:1113897/137‑1 (MQ=255)
                                                                                         ttAGATGATTTTTTTTTCGTTAAATGCCTGAAAAACATGCATGACCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                              <  2:571228/149‑1 (MQ=255)
                                                                                          tAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAt                                                           >  2:1054859/1‑151 (MQ=255)
                                                                                           aGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAtt                                                          >  1:419279/1‑151 (MQ=255)
                                                                                              tgatTTTTTTGTCGTTTATTGCCTTAAAAACAAGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGa                                                            <  2:942705/146‑1 (MQ=255)
                                                                                              tgatTTTTTTGTCGTTTAATGCTTGAAAAACATGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAt                                                           <  2:553516/147‑1 (MQ=255)
                                                                                                 tttttttGTCTTTTAATCCCTAAAAAACATGCATAACCAAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACg                                                      <  1:344832/147‑1 (MQ=255)
                                                                                                 tttttttGTCGTTTAATGCCTAAAAAACATGCAGGAGCCAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTa                                                        <  2:61934/145‑1 (MQ=255)
                                                                                                    ttttGTCGTTTAAGTCCTGAAAACCATAAAGGAGCCAAAAAAAAATAAAAAAAAACCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                                    <  2:581395/148‑1 (MQ=255)
                                                                                                    ttttGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatc                                                 >  2:431832/1‑151 (MQ=255)
                                                                                                      ttttcgttaaaTGCCTAAAAAACATGCAGGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatca                                                <  2:752588/141‑1 (MQ=255)
                                                                                                      ttGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTcatcat                                               >  2:1353120/1‑151 (MQ=255)
                                                                                                       tGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                                              >  2:157127/1‑151 (MQ=255)
                                                                                                          cgtttAATGCTTGTAAAACTTGTTTGAGCAAAAAAATAATAAAAAAACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgtg                                           <  1:150179/148‑1 (MQ=255)
                                                                                                          cgtttAATGCTTAAAAAACATGCAGGACCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgt                                            <  2:1004772/147‑1 (MQ=255)
                                                                                                           gtttAATGCCTGAAAAACATGCATGACCCAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                                              <  2:865389/145‑1 (MQ=255)
                                                                                                                   ccTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAatat                                  >  1:395628/1‑151 (MQ=255)
                                                                                                                       aaaaaCATGAATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCa                               <  2:1117046/149‑1 (MQ=255)
                                                                                                                        aaaaCATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATCTGCATTGATTTACGTCATCATTGTGAATTAATATGCaa                              >  2:1305122/1‑150 (MQ=255)
                                                                                                                        aaaaCATGCATGAGCAAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaa                              <  2:219376/150‑1 (MQ=255)
                                                                                                                         aaaCATGCGTGAGCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAAt                            <  2:843300/151‑1 (MQ=255)
                                                                                                                          attttgaagagcccACAAAATATAAAAAAAAGTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATa                           <  2:359353/139‑1 (MQ=255)
                                                                                                                          aaCATGCAGGACCCAAAAAAAAAAAAAAAAACTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATa                           <  1:570778/151‑1 (MQ=255)
                                                                                                                            catgcatgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa                          >  1:798615/1‑150 (MQ=255)
                                                                                                                               gcatgACCCAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagt                       <  1:146232/150‑1 (MQ=255)
                                                                                                                                  tgAGCCACAAAATAATATAAAACATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagcgag                    >  1:1057062/1‑150 (MQ=255)
                                                                                                                                    aGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagtg                  >  2:436202/1‑150 (MQ=255)
                                                                                                                                      ccAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgag                    <  1:700990/146‑1 (MQ=255)
                                                                                                                                      caaaaaaaaaATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAat               <  2:27921/147‑1 (MQ=255)
                                                                                                                                       cacaAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAat               >  2:650205/1‑150 (MQ=255)
                                                                                                                                        aaaaaataaaatAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgag                    <  1:304965/142‑1 (MQ=255)
                                                                                                                                        aaaaaaaaATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagt                       <  2:330876/139‑1 (MQ=255)
                                                                                                                                        aaaaaaTAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAatat             <  2:970022/149‑1 (MQ=255)
                                                                                                                                          aaaaTAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCAAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTACGCAGATTTGCCTTGATTTACTCCATCATTGTGAATTATTTTGCAATTAAGGTGAGAGAatat             >  2:1314939/1‑149 (MQ=255)
                                                                                                                                           aaaTAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtct          >  2:1424790/1‑151 (MQ=255)
                                                                                                                                           aaaTAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtct          <  1:1172242/151‑1 (MQ=255)
                                                                                                                                             ataataTAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTctct        >  1:539024/1‑151 (MQ=255)
                                                                                                                                             aaaataAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTctct        <  2:562979/149‑1 (MQ=255)
                                                                                                                                                atatAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg      >  1:1188933/1‑150 (MQ=255)
                                                                                                                                                  ataAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAg    <  2:895497/150‑1 (MQ=255)
                                                                                                                                                   taAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAGTGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAggg  >  2:1329094/1‑151 (MQ=255)
                                                                                                                                                   taAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAggg  >  2:396074/1‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
AATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAGGG  >  NC_000913/29349‑29646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑