New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	2896407 =	NA (NA)	56 (0.900)	52/580	0.3	100%	intergenic (+63/+105)	LY180_13765/LY180_13770	6‑phospho‑beta‑glucosidase/transposase
	?	CP006584	3262157 =	0 (0.000)					intergenic (+107/+16)	LY180_15475/LY180_15480	GSH‑dependent disulfide bond oxidoreductase/hydrogenase 2 accessory protein HypG

ATGCCCGCAATGGTAGCCACCAGTAAGACTGAGTGGGGACGGGCGTTCCGCGACCGTCTGGCGGCTAATGGCAAGAAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATctac‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP006584/2896700‑2896407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAACGCCAATACACATTATTAACTCCGGTTATTCAACTTC  >  CP006584/3262157‑3262445                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGCCCGCAATGGTAGCCACCAGTAAGACTGAGTGGGGACGGGCGTTCCGCGACCGTCTGGCGGCTAATGGCAAGAAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGGTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACG                                                                                                                                                                                                                                                                                              >  1:263994/1‑299                       GTAAGACTGAGTGGGGACGGGCGTTCCGCGACCGTCTGGCGGCTAATGGCAAGAAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGG                                                                                                                                                                                                                                                                        >  1:194535/1‑299                                AGTGGGGACGGGCGTTCCGCGACCGTCTGGCGGCTAATGGCAAGAAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGT                                                                                                                                                                                                                                                               <  1:232573/299‑1                                     GGACGGGCGTCCCGCGACCGTGTGGCGGCTAATGGCAAGAAAGGAAAGGTGAGTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGGATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCC                                                                                                                                                                                                                                                          <  1:480781/299‑1                                       ACGGGCGTTCCGCGACCGTCTGGCGGCTAATGGAAAGAAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCAT                                                                                                                                                                                                                                                        <  1:160256/299‑1                                            aGTTCCGCGACCGTGTGGCGGCTAATGGCAAGAAAGGAAAGGTGATCCTCGGCGCGAGGATGGGCAAGCGGGCACAGGGGGCGTATGGAGGGCTGAAGTCAGGGGTGCCGTTCGATGCGGCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAGCAGCGCCTGACGGCGCTGTGTCTGGCATGCTTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGC                                                                                                                                                                                                                                                   <  1:634402/298‑1                                                    GACCGTCTGGCGGCTAATGGCAAGAAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATAATCACGCGGTGGTAATGTCGTAATCCATTTGGCTCAGTGCG                                                                                                                                                                                                                                           >  1:132025/1‑299                                                              CGGCTAATGGCAAGAAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATACTCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAACCAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGACACCGGACCAGGAAAAACCTTGCAGGCCATAACAGTAACTACGAAAGCCAACCATCACGCGCCGGTACTATCGGAATCCCTTGTGCCCCATGCGACTAATGTGG                                                                                                                                                                                                                                 >  2:24450/1‑299                                                                 CTAATGGCAAGAAAGGAAAGGGGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTACCGTTCGATGCGTCAGGGCATAATGCGGTAGC‑GGCGTAAAAATCTCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGATGTCTCTGGCATGCCTGCAATCCGGGAAACCGGAACAGGAAAACACTTGCAGGCCATACCAGTCTCTACCAAGACAAATCATCCCACGCAGGGAATGTCGTAATACACTTGACGCAGGCCCGCTAATGTCGCTT                                                                                                                                                                                                                              >  2:238379/1‑299                                                                   AATGGCAAGAAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTG                                                                                                                                                                                                                            <  1:267856/299‑1                                                                    ATGGCAAGAAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGG                                                                                                                                                                                                                           <  1:127940/299‑1                                                                            AAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGAGCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCT                                                                                                                                                                                                                   <  1:510947/299‑1                                                                              AGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTC                                                                                                                                                                                                                 <  1:238379/299‑1                                                                                 AAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTC                                                                                                                                                                                                              >  1:390163/1‑299                                                                                  AAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCAAGCCCTGGTAATGTCGTAATCCCTTTGGCGCATGACGTCAAATGTGGCTTTGGCTTCATCTTCGTCG                                                                                                                                                                                                             >  2:352217/1‑299                                                                                   AGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACAAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCGGGTAATGTCGTAATCCATTTGGCGCATTCCGTCTCATGTGGCTTTGGCTTCATCTTCGTCcc                                                                                                                                                                                                            >  2:248840/1‑297                                                                                      TGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGA                                                                                                                                                                                                         <  1:375753/299‑1                                                                                                            agggtggggactGGTGGGGTATGGAGGGCCGGAGTGGGGCGTGGCGTTCGTTGCGTCACGGCATAGACCGGTAGC‑GGCGTAAAACGCGCGGAAGGGATGAAAAAAACAGCGCCTGGGGGCGCTGGGTCGGGCATGCCTGGAATCGGGGAAACCGGGCCAGGAAAAAGCTGGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAAGCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTG                                                                                                                                                                                   <  2:170596/287‑1                                                                                                              AGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTA                                                                                                                                                                                 >  1:228756/1‑299                                                                                                                  GGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAACAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTCTCTACGAAAGCTAAACCTCCCGCGCTGGTAATTGCGTAATCCATTTCGCGCAACGAGTCTCATTGGGCCTTGGCCTCATCTTCGTCGCTGATGCTCGAGGCCAATCCGAAGTtacaccg                                                                                                                                                                             >  2:403487/1‑292                                                                                                                      CAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACC                                                                                                                                                                         <  1:365749/299‑1                                                                                                                            GCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTGACTGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGG                                                                                                                                                                   <  1:74260/299‑1                                                                                                                                      TGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATATTCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGAT                                                                                                                                                         <  1:28423/299‑1                                                                                                                                            AGTTAGGCGTGCCGTTTGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAG                                                                                                                                                   <  1:663654/299‑1                                                                                                                                               CAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGT                                                                                                                                                >  1:420960/1‑299                                                                                                                                                 GGCGTGCCGTGCGATGCGTCACGGCAGAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGTCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCATGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTTGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTA                                                                                                                                              <  1:288698/299‑1                                                                                                                                                       CCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCA                                                                                                                                        <  1:248840/299‑1                                                                                                                                                            CGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAAT                                                                                                                                   <  1:461026/299‑1                                                                                                                                                                  gaCACGTCATAACCCGG‑AGCTGGCGTAAAAATCGCGGCAGGGAGGAAAAAACCAGCGCCTGAGCGGGCTGTGGCTGGCATGCCGGCAATCCGGGAAGCCGGACCAGGAAAAAGCTTGCAGGCCATAACAGTAGCGACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCAGTTGGCGCAGTGCGGCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGC                                                                                                                             <  2:607650/297‑1                                                                                                                                                                  GTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGC                                                                                                                             <  1:500133/299‑1                                                                                                                                                                                    gagtgggggAAAAGTCGGGGAAGGGATGAAACAACCAGCGGCTGACGGCGGTGTGTCTGGCGTGGCTGCAATCCGGGAAACCGGACCAGGAGAAAAGTTGCGGGCTATAACAGTAGCTACGAAGTCTAGTCATGACGCGGTGGTAAGGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCAGCTTCGTCGATGATGCTCATGGGAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACATTCACGAATCAGGGCGATATTCACGTCGCGCT                                                                                                            <  2:392685/290‑1                                                                                                                                                                                    AGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTT                                                                                                           <  1:187605/299‑1                                                                                                                                                                                     ggggggggAAAAATCGCGGAAAGGCTTAAAAAAACAGAGCCTGACGGCTCTGGGTCTGTGATGCCTGCAATACGGGAAGCCGTACCAGGAAAAGACGTGCAGGCCATAACAGTTTATACGAAAGCTAGTAAGCACGCGGTGGTAATGGCGTAAGCCATTTGGCGCAGTGCGTCTAAGGTGGCTGTGGCTTCATCCTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTT                                                                                                           <  2:194535/291‑1                                                                                                                                                                                        GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGAT                                                                                                        >  1:348640/1‑299                                                                                                                                                                                         gggaAAAAAGCGCGGGAGGGCTGAAAAAACGAGGGCCGGTCGGCGCGGTGTCGGACATGCCTGCAAGCGGGGAAACCGGAGCAGGACACAACATGCAGGACATAACAGGATCTACGAAAGCGTGACATCACGCGCTGGTAATGTCGTAATGCATTTGGCGCAGTGCGTCTAATGTGGCTGTGGCGTCAGCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACACACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATA                                                                                                       <  2:140073/295‑1                                                                                                                                                                                          CGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGACACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATATTCGTCGATGATGCGCATGGCAAATCCGACGCGTACCAGCACCAACTGGCCCAGCAGATCGGCAGGGTTACCTTCCCCAGCCAGGGCCATATTCACGTCGatgctcatcc                                                                                                      >  2:480705/1‑289                                                                                                                                                                                             AAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCAC                                                                                                   >  1:344695/1‑299                                                                                                                                                                                                 ATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCT                                                                                                                                           <  2:485682/255‑1                                                                                                                                                                                                 ATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCT                                                                                                                                           >  1:485682/1‑255                                                                                                                                                                                                     CGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCA                                                                                           <  1:480705/299‑1                                                                                                                                                                                                             ATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGC                                                                                   <  1:383812/299‑1                                                                                                                                                                                                                                             TGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCA                                                   <  1:198364/299‑1                                                                                                                                                                                                                                                CATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGGCGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCT                                                <  1:550701/299‑1                                                                                                                                                                                                                                                 ATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGAT                                                                                                                                                                                                           <  2:368914/143‑1                                                                                                                                                                                                                                                 ATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGAT                                                                                                                                                                                                           >  1:368914/1‑143                                                                                                                                                                                                                                                       GCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGG                                         <  1:582490/299‑1                                                                                                                                                                                                                                                         AATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAA                                       >  1:218699/1‑299                                                                                                                                                                                                                                                            CCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATTTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTTGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAACGC                                    <  1:36915/299‑1                                                                                                                                                                                                                                                             CGGGCAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAACGCC                                   <  1:206296/299‑1                                                                                                                                                                                                                                                                GAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAACGCCAAT                                <  1:35255/299‑1                                                                                                                                                                                                                                                                                 AAACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAACGCCAATACACATTATTAACTCCG               >  1:132804/1‑299                                                                                                                                                                                                                                                                                   ACTTGCAGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAACGCCAATACACATTATTAACTCCGGT             <  1:24450/299‑1                                                                                                                                                                                                                                                                                         AGGCCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAACACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGAGATATTCACGTCCCGCTTGATAACACATAATTCCACCTGCGCAATCGGGTGAATATCTTCACCGACAGCCCACAACGGGCCCGCACAGCCAAAACACAATATTAACCCAGCTTATacc       >  2:113445/1‑296                                                                                                                                                                                                                                                                                            CCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAACGCCAATACACATTATTAACTCCGGTTATTCAACT    >  1:723967/1‑299                                                                                                                                                                                                                                                                                            CCATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAACGCCAATACACATTATTAACTCCGGTTATTCAACT    >  1:454341/1‑299                                                                                                                                                                                                                                                                                              ATAACAGTATCTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAACGCCAATACACATTATTAACTCCGGTTATTCAACTTC  <  1:352217/299‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGCCCGCAATGGTAGCCACCAGTAAGACTGAGTGGGGACGGGCGTTCCGCGACCGTCTGGCGGCTAATGGCAAGAAAGGAAAGGTGATTCTCGGCGCGATGATGCGCAAGCTGGCACAGGTGGCGTATGGAGTGCTGAAGTCAGGCGTGCCGTTCGATGCGTCACGGCATAATCCGGTAGC‑GGCGTAAAAATCGCGGAAGGGATGAAAAAAACAGCGCCTGACGGCGCTGTGTCTGGCATGCCTGCAATCCGGGAAACCGGACCAGGAAAAAACTTGCAGGCCATAACAGTATctac‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP006584/2896700‑2896407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTACGAAAGCTAATCATCACGCGCTGGTAATGTCGTAATCCATTTGGCGCAGTGCGTCTAATGTGGCTTTGGCTTCATCTTCGTCGATGATGCTCATGGCAAATCCGACGTGTACCAGCACCCACTGGCCCAGCAGATCGGCAGGGTTACCTTCACAAATCAGGGCGATATTCACGTCGCGCTTGATACCACATACTTCAACCTGCGCAAGCTGGTGAATATCTTCACCGACAGCCAGCACCTGGCCTGGAACGCCAATACACATTATTAACTCCGGTTATTCAACTTC  >  CP006584/3262157‑3262445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.