New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 2253835	18 (0.280)	32 (0.530)	31/558	1.1	65.2%	coding (52/414 nt)	LY180_10760	hypothetical protein
	?	CP006584	= 2255646	17 (0.280)					coding (842/1284 nt)	LY180_10775	tail protein

TCCAGCACCTCCGCCTATATTCCCGGCAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCGTGGTGTTATTTCCTGCGGCAGGCGTCGGCGCTTTTGGTTCTCCGGTAAATGTCGGATTATGTTTCTG  >  CP006584/2255354‑2255944                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                           tcccacccttcctcctaaattcccGACAAACGGGAAAACGTTTGCGGCTTCCCGCCAGCTTAATAATTCGCGA‑CCTCCAGCGGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctc                                                                                                                                                                                                                                                                                                      >  2:465443‑M2/10‑293 (MQ=255)       aCCTCCGCCTATATTCCCGGCAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaac                                                                                                                                                                                                                                                                                                >  1:471741‑M2/1‑287 (MQ=255)         cTCCGCCTATATTCCCGGCAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaacca                                                                                                                                                                                                                                                                                              <  1:261913‑M2/299‑15 (MQ=255)                   atTCCCGGCAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatga                                                                                                                                                                                                                                                                                    >  1:174404‑M2/1‑275 (MQ=255)                    ttCCCGGCAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCgag                                                                                                                                                                                                                                                                                   <  1:44275/299‑1 (MQ=255)                           cAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGACTGAAATCACCGCGGGCTTCAGGTAATACCAGCGCAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTAGCCCCGGTAAACTGCAAAAACACCATACTGCACCAGCTGTCGATTACAGTCTTTGGCATTCCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCCTGAGCACctcttccccaaccaacctttctgacactacag                                                                                                                                                                                                                                                                            <  2:523026‑M2/299‑33 (MQ=255)                           cAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcag                                                                                                                                                                                                                                                                            >  1:461446‑M2/1‑267 (MQ=255)                                     atcttttgtagCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacggg                                                                                                                                                                                                                                                                  >  1:413420‑M2/5‑257 (MQ=255)                                     aaaGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCtt                                                                                                                                                                                                                                                                  >  1:376502/1‑299 (MQ=255)                                        gTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAACAACACCATACTGGACCAGCTGTCGATTCCAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACACCCATAGCTGGAACACcttatccccaaccaacgattctgaaaatccagacaaaacgcgcaa                                                                                                                                                                                                                                                               <  2:560997‑M2/299‑46 (MQ=255)                                         tttGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCCCAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAACAACACCATCCTGGACCAGCCGTCGATTCCAGTATTTGTCATTGCCGAGGCAGGCAAGAAGAACGGAACCCCAATAGCTGGAGACActtccccccaaacaacggttaagaaaatgcaaagataaaggggaag                                                                                                                                                                                                                                                              <  2:413420‑M2/299‑47 (MQ=255)                                         ttgtgggcgtgccgCCAGTGTAATAATTCGCCACCCACCA‑CTGCACCGCGCCCGTCATCCCAGACAGGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTGTCTCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTcc                                                                                                                                                                                                                                                              <  2:395347/286‑1 (MQ=255)                                            gtcgCTTCCTGCCCACTTACTAATTCGCGA‑GCACCATCTGCGCCTCGCCCGGCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATAACAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACt                                                                                                                                                                                                                                                           <  2:388795/296‑1 (MQ=255)                                                 ttCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAAt                                                                                                                                                                                                                                                      <  1:609504/299‑1 (MQ=255)                                                      gCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAACATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGACGAACGGAACGCCAATAGCTGGAGCACagtctcccaaaccaacgtatatgcaccagcagagataaagggcaactggcctaacatcc                                                                                                                                                                                                                                                 <  2:136639‑M2/299‑60 (MQ=255)                                                      gCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctcc                                                                                                                                                                                                                                                 >  1:230245‑M2/1‑240 (MQ=255)                                                                     cgcgA‑CAACCATCTGCACCGCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACCCCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGt                                                                                                                                                                                                                                  <  1:74643/299‑1 (MQ=255)                                                                           ccaccaTCTGCACCTCGCCCGTCATACCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatg                                                                                                                                                                                                                             >  1:7531‑M2/1‑220 (MQ=255)                                                                           ccaacaTCTGCACCTCGCCCGTCATCCCAGACACTAATGAAATCACCGCGGGCGTCAGGTAATACCAGCGAATGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAATCTTCAAATACACCATACTGTAACAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCAAATAGCTGTAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTATCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTg                                                                                                                                                                                                                             <  1:206334/299‑1 (MQ=255)                                                                                            cccGTCATCCCAGACACGAATAAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCAt                                                                                                                                                                                                            <  1:22826/299‑1 (MQ=255)                                                                                                        gACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaccgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtc                                                                                                                                                                                                <  1:347621‑M2/299‑109 (MQ=255)                                                                                                           acGAATGAAATCACCGCGGGCTTCAGTTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCTGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaac                                                                                                                                                                                             >  1:689744‑M2/1‑188 (MQ=255)                                                                                                                          gcgGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatac                                                                                                                                                                              >  1:14727‑M2/1‑173 (MQ=255)                                                                                                                            gggCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacgg                                                                                                                                                                            >  1:19854‑M2/1‑171 (MQ=255)                                                                                                                                    ggTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcag                                                                                                                                                                    >  1:618720‑M2/1‑163 (MQ=255)                                                                                                                                       aaTACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGc                                                                                                                                                                 <  1:203773/299‑1 (MQ=255)                                                                                                                                          aCCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaac                                                                                                                                                              >  1:318404‑M2/1‑157 (MQ=255)                                                                                                                                             aGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTGATGGCTGCGGCAAt                                                                                                                                                           >  1:209275/1‑299 (MQ=255)                                                                                                                                                 aaGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctgg                                                                                                                                                       <  1:645802‑M2/299‑150 (MQ=255)                                                                                                                                                  aGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctgga                                                                                                                                                      <  1:660126‑M2/299‑151 (MQ=255)                                                                                                                                                         acTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACCTCTTTTCCCCTCAACTGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCCCATTGTTAATGGTGGGGCTGAATTTGGGGTAGTTGTTCATGGCTGCGGCAATTTCTTTCatgtt                                                                                                                                               >  2:716301/1‑295 (MQ=255)                                                                                                                                                             tCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggat                                                                                                                                           >  1:136639‑M2/1‑138 (MQ=255)                                                                                                                                                              cGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatg                                                                                                                                          <  1:293483‑M2/299‑163 (MQ=255)                                                                                                                                                               gCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACCGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCTAATAGCTGGAGCACcttctcccaaaccaacgtttatcaaaatgcagagataacgggtaaccggcatcatctccggtttttattcagggagatgctcatgcttattggctaggtaggcgtgtcaaaaaatacactgaatacggcagtgcagtggaaagcacgggaatgtgcaggacga                                                                                                                                         <  2:228678‑M2/299‑164 (MQ=255)                                                                                                                                                                                      aGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaat                                                                                                                  <  1:632621‑M2/299‑187 (MQ=255)                                                                                                                                                                                           aTTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcg                                                                                                             <  1:297256‑M2/299‑192 (MQ=255)                                                                                                                                                                                                             tCAAACACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACa                                                                                           <  1:668059/299‑1 (MQ=255)                                                                                                                                                                                                                 aaaCACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgccgcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaaccagcggcacgaagtccgcacagccggg                                                                                       <  2:174200‑M2/299‑214 (MQ=255)                                                                                                                                                                                                                 aaaCACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacaggccggg                                                                                       <  1:136294‑M2/299‑214 (MQ=255)                                                                                                                                                                                                                               aCCAGCTGTCGATTACAGTATTTGGCATTGTCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaaccaatgaccagaagacggaattgcagcgtaacgcactggagtgcgcaggctgtgagctgattttgtatgacaaaatcagaggcacgacggccgccaggccgggccggaaaaaacttc                                                                         <  2:73279‑M2/299‑228 (MQ=255)                                                                                                                                                                                                                               aCCAGCTGTCGATTACAGTATTGGGCATTGCCGCGGAGGGCCAGAAGAACGGACCGTCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTGCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATc                                                                         <  1:688019/299‑1 (MQ=255)                                                                                                                                                                                                                                ccAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATcc                                                                        <  1:376019/299‑1 (MQ=255)                                                                                                                                                                                                                                     tGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacaggccgggactgaaaaaactgctcagga                                                                   >  1:560997‑M2/1‑66 (MQ=255)                                                                                                                                                                                                                                                        cATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCGTGGTGTTATTTCCTGCGGCAg                                                >  1:336582/1‑299 (MQ=255)                                                                                                                                                                                                                                                                 ggAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacaggccgggactgaaaaaactgctcaggacattatcggagggggatacactggtagt                                       <  1:504112‑M2/299‑262 (MQ=255)                                                                                                                                                                                                                                                                            agaaCGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacaggccgggactgaaaaaactgctcaggacattatcggagggggatacactggtagtctggaagctgg                            >  1:523026‑M2/1‑27 (MQ=255)                                                                                                                                                                                                                                                                                   aacgCTAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacaggccgggactgaaaaaactgctcaggacattatcggagggggatacactggtagtctggaagctggaccggct                     >  1:228678‑M2/1‑20 (MQ=255)                                                                                                                                                                                                                                                                                      gCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCGTGGTGTTATTTCCTGCGGCAGGCGTCGGCGCTTTTGGTTCTCCGGTAAATg                  >  1:270086/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                        cAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCGTGGTGTTATTTCCTGCGGCAGGCCTCGGCGCTTTTTGTTCTCCGGTAAATGTc                >  1:399684/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                                 gAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacaggccgggactgaaaaaactgctcaggacattatcggagggggatacactggtagtctggaagctggaccggctggggcgtagtatgc       <  1:144060‑M2/299‑294 (MQ=255)                                                                                                                                                                                                                                                                                                     aCcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacaggccgggactgaaaaaactgctcaggacattatcggagggggatacactggtagtctggaagctggaccggctggggcgtagtatgcggca   <  1:302308‑M2/299‑298 (MQ=255)                                                                                                                                                                                                                                                                                                      ccttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacaggccgggactgaaaaaactgctcaggacattatcggagggggatacactggtagtctggaagctggaccggctggggcgtagtatgcggcat  >  1:256186‑M2/1‑1 (MQ=255)                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                           TCCAGCACCTCCGCCTATATTCCCGGCAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGA‑CCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCGTGGTGTTATTTCCTGCGGCAGGCGTCGGCGCTTTTGGTTCTCCGGTAAATGTCGGATTATGTTTCTG  >  CP006584/2255354‑2255944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.