| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP006584 | 3345698–3346066 | 3377332–3376397 | 30332–31635 | 17 [16] | [16] 17 | ebgC–LY180_16025 | ebgC,LY180_15890,LY180_15895,LY180_15900,fadH,LY180_15910,LY180_15915,LY180_15920,LY180_15925,LY180_15930,LY180_15935,LY180_15940,LY180_15945,LY180_15950,LY180_15955,LY180_15960,LY180_15965,LY180_15970,LY180_15975,LY180_15980,LY180_15985,LY180_15990,LY180_15995,LY180_16000,LY180_16005,LY180_16010,LY180_16015,LY180_16020,LY180_16025 |
AGAGGAAAAGTACAATATGCAGACCTAGGAGCGGAAAACTGGAAACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCGTCGGCAAAGGAGCCATGGGTTCTAGCAACTAACTTACCTGTTGAAATTCG‑A‑A‑CACCA‑A‑A‑C‑A‑ACTTGTTAATATCTATTCGAAGCGAATGCAGATTGAAGAAACCTTCCGAGACTTGAAAAGTCCTGCCTACGGACTAGGCCTACGCCATAGCCGAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTACATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAAT > CP006584/3345400‑3345976 | agagGAAAAGTACAATATGCAGACCTAGGAGCGGAAAACTGGACACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATTCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCCTCGGCCAACGCACCCTTGGTTCCACCCACTAACTTACCTGTTGAAATTTG‑C‑A‑CCCCA‑ACA‑C‑A‑CATTGTTaa > 2:119724/1‑299 (MQ=1) aaaaGTACAATATGCAGACCTAGGAGCGGAAAACTGGAAACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTACAGGCCGAAAAAATCATCGC‑TCGACACAGACTCATTGTCACCAACCGTCACCTAAAATCTACTCACCGTCGACAAAGGAGCCCTGGGTTCTAGCAACTAAACTACCTCTTACAATTCG‑A‑A‑CACCACA‑A‑C‑A‑ACCTGTTAataacc > 2:700225/1‑296 (MQ=1) tACAATATGCAGACCTAGGAGCGGAAAACTGGAAACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCGTCGGCAAAGGAGCCATGGGTTCTAGCAACTAACTTACCTGTTGAAATTCG‑A‑ACCACCA‑A‑A‑C‑A‑ACTTGTTAATACCTATTCg > 2:617263/1‑299 (MQ=1) gACCTAGGAGCGGAAAACTGGAAACCTATCAGCAACTTACATGATATGTCCTCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAACTCTCGACCTAAAGGCCGAAAAAATACGCGC‑TCGCCACGGACTCATTGTCACCACACCTCACCTAACATCTACTCAGCGTCGGCAAAGGAGCCATGGCTTGAAGCAACTAACGTACCTGTTGAACTTCGAA‑A‑CGCAA‑A‑A‑C‑A‑CATTGTAACTATTTAGTCTAAGAGACTGCa > 2:726449/1‑299 (MQ=1) cTAGGAGCGGAAAACTGGCAACCTATCAGCAACTTACATGATATGACATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATCGTATAAATCTCGCCCTAAAGGCCGAAAAAATCAGCGC‑ACGACACGAACTCCTTGTCACCAACCCTCACCTAACATCTCCTCCGCGTCGGCACAGGCGCCATGGGTTCTAGCAACTAACTTACCTTGTGAAATTCG‑ACA‑CACCA‑A‑A‑C‑A‑ACTTCTTAATACCCATTCGATACAAATGCAGAt > 2:280921/1‑299 (MQ=11) cTAGGAGCGGAAAACTGGAAACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCAATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCGTCGGCAAAGGAGCCATGGGTTCTAGCAACTAACTTACCTGTTGACATTCG‑A‑A‑CCCCC‑A‑A‑C‑ACACTTGTTAATATCTATTAGAAGCCAATGCaact > 2:175805/1‑296 (MQ=0) aGGAGCGGAAAACTGGAAACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCATCGC‑TCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCGTCGGC‑AAGGAGCCATGGGTTCTAGCAACTAACTTACCTGTTGAAATTCG‑A‑A‑CACCA‑A‑ACC‑A‑ACTTGTTAATATCTATTCGAAGCGAATGCAGAttaa > 2:327635/1‑297 (MQ=0) aaaCTGGAAACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACAACCCGTCACCTAAACGCTACTCAGAGTCGGCAAAGGAGCCATGGGTTCTAACCACTAACTTCACTGTTGCAATTCT‑A‑A‑CACCACA‑A‑C‑A‑AATAGCAAAGATCTATTCTAATCGAATGCAAGTCTAAGAAACCt > 2:170460/1‑299 (MQ=1) aCTGGCAACCTATCAGCAACTTACATGATATGTCATCTGTTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATACATCTAGCTCTAAAAGCCGAAAAAAACAGCGC‑ACGACACGGAATAATCATCAAGTCTCTCCACCTAAACGCTAATCAGCGTCGACAAACGAACCAATTTGACAAGCAACTAACATACCAGCTCAACTTCG‑A‑A‑CATCA‑A‑A‑CTA‑ACTTATTAATATCTATTCGAACCCAATTCATATTTAAGtaaattca > 2:257600/1‑294 (MQ=2) aaaCCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACCACCCGTCACCTACAATCTACTCAGCGTCGGCAAAGGAACCATGGGTTCTAGCACCTAACTTACCTGTTGAAATTCG‑A‑ACCACCA‑A‑A‑C‑A‑ACTTGGTAAATCCTATTCCAAACAAACGCCAAATGAAAAACCCTTccaata > 2:357793/1‑295 (MQ=1) cAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCGTCGGCAAAGGAGCCATGGGTTCTACAAACTAACTTACCTGTTGAAATTCG‑A‑ACCACCA‑A‑A‑T‑A‑ACCTATAAATATCTCTTCGAACACAATGCCAATTGAATAAACCTTCCTCGACttacaaa > 2:285173/1‑294 (MQ=1) cAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACAACCCGTCACCTAAAAACTACTCAACGTCGGCAAAGAAGCCATCGGTTCTAGCAACTCACTTACCTGTTGAAATTCG‑A‑ACCACCA‑A‑A‑C‑A‑ACTGGTTAATATCTATTCGAAGCAAATGCAGATTGAAGAAACCTTCCGAGACTGTAAAAGTc > 2:715399/1‑299 (MQ=1) cAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCACATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCGTCGGCAAAGGAGCCATGGGTTCTAGCAACTAACTTACCTGTTGAAATTCG‑A‑ACCACCA‑A‑A‑C‑A‑ACTTGTTAATATCTATTCGAAGCGAATGACGATTGAAGAAACCTTCCGAAACTTGAAAAGTACTGCCTACGGACTAGGCATACGACCTAGc > 2:126036/1‑299 (MQ=1) tataAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACCACCCGTCACTTAAAATCTACTCAGCGTCGGCAAAGGAGCCATGGGTTCTAGCAACTAACTTACCTGTTGACATTCG‑A‑ACCACCA‑C‑A‑C‑A‑ACATGTTAATATCTATTCGAAGCGAATGCAGATTGAAGAAACCTTCCGATACTAGAAAAGTCCTGACTACGGTCTAGGCCTACGCCATAGCCGAACCagacgaga > 2:714606/1‑293 (MQ=1) gCCGAAAAAAACA‑CGCATCGACACGGACTAATGGGTACCAACCGTCACCTAAAAACAACTCGGGGTCTGCAAAGGAGCCATGGGTGCTAGCAACTAACTTACCTGTTGATATTCG‑G‑A‑CACCA‑ATA‑C‑A‑ACTGTGTAATATCTATACGGATCGAATGCAGATTGAAGAAACCTTCCGAGACTTGAAAAGTCCTGCCTACGGACTAGGCCTACGCCATAGCCGAACGAGCAGCTTAGAGCGTTTTGATATCATGCTGCTGTTCGCCCTGATGCTTCAACTAACATGTTGGCTTTCGGGCGtt < 2:32423/299‑2 (MQ=1) ggTTCTAGCAACTAACTTACCTGTTGAAATTCGAA‑A‑CACCA‑A‑A‑C‑A‑ACTTGTTAATATCTCTTCGAAGCGAATGCAGATTGAAGAAACCTTCCGAGACGTGAAAAGTCCTGCCTACGGACTAGGCCTACGCCATAGCCGAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAg < 2:270640/299‑1 (MQ=0) agacCA‑A‑ACC‑A‑TCTGGTTAATATCTAGTCGAGGCGAAGTCAGATTGAAGAAACCGTCCGAGACTTGGAAATTCCTGCGTACGGACTAGGCCAACGCCATAGCCGAACTAGCAGCTCAGAGCGTTTTGATAGCATGCTGCGAATCGCCCTGGTGCTTCAAGTAACATGTTGGCTTGCGGGCGTGCATGCTCAGAAACAAGGTTGGGACAAGCACTCCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAAt < 2:656284/297‑1 (MQ=1) | AGAGGAAAAGTACAATATGCAGACCTAGGAGCGGAAAACTGGAAACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGC‑TCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCGTCGGCAAAGGAGCCATGGGTTCTAGCAACTAACTTACCTGTTGAAATTCG‑A‑A‑CACCA‑A‑A‑C‑A‑ACTTGTTAATATCTATTCGAAGCGAATGCAGATTGAAGAAACCTTCCGAGACTTGAAAAGTCCTGCCTACGGACTAGGCCTACGCCATAGCCGAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTACATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAAT > CP006584/3345400‑3345976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |