| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006584 | 1,324,434 | A→C | K833T (AAA→ACA) | narZ → | nitrate reductase A subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006584 | 1,324,434 | 0 | A | C | 98.3% | 207.4 / NA | 59 | K833T (AAA→ACA) | narZ | nitrate reductase A subunit alpha |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (34/24); minor base G (0/1); total (34/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
GGAGCACGGTATCCAGGGTAAAGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGAAATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCT > CP006584/1324141‑1324728 | ggAGCACGGTATCCAGGGTAAAGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATtct < 1:96331/299‑1 (MQ=255) aGCACGGTATCCAGGGTAAAGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTcc < 1:374145/299‑1 (MQ=255) aCGGTATCCAGGGTAAAGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGaa > 1:429405/1‑299 (MQ=255) ggaTCCGGGGTAAAAGACGGGGGCAGAAGGGCGGCGTGAAGAGTGAAGAAGGGGAAGGGCAGGAACATGGGCTGGAAGGCAAGCTGGGTTGGGGGGTGACGCTGGCCTTCCGTCGGTCGAGCACCTGTCTCTATGCCGGCATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAAGACTTCGGAGATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCGGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAgtg < 2:373143/297‑1 (MQ=255) tATCCAGGGTAAAGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAgtgt > 1:77731/1‑299 (MQ=255) tAAAGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTc < 1:694360/299‑1 (MQ=255) aGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATc < 1:243786/299‑1 (MQ=255) cAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAAc > 1:682181/1‑299 (MQ=255) cAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAAc > 1:326211/1‑299 (MQ=255) aGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAAcc < 1:607789/299‑1 (MQ=255) cgTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCg > 1:204232/1‑299 (MQ=255) aaGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCGCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCAc < 2:77731/299‑1 (MQ=255) ccGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCt < 1:266923/299‑1 (MQ=255) cGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTg > 1:15669/1‑299 (MQ=255) gTGGCCGGGCAGGAAAATGGTCTGGAAGGGAAGCTGGATATGGTGGTTGCGCTGGTGTCGCGTCTGTCGGGCACCTGGATCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTGATTCACCCGCTGGCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCa < 2:256349/299‑1 (MQ=255) ggACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTg > 1:622789/1‑299 (MQ=255) cAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGACAACGACGAACTGCATACTGCGGATATGCTTCCGTTTATGCACCCGCTGTCTGCGGCGGTCGAGCCGGCCTGGGAAGCGCCAGCCGACTGGGCAATTTACAAACCCATCGCGAAGACCTTCTCCAACGTCTGCGTCGCGCATCTGGCTAGAGAAACCAACAACGTCACGCTGCCTATCCAGCACGACGCTGCCGCTGCACTGCCGCAGc > 2:636699/1‑299 (MQ=255) cTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCt < 2:622789/299‑1 (MQ=255) aTCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGAt < 1:170942/299‑1 (MQ=255) tggtggTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCCGCCGCTGAACTGGCGCAGCCGCCGGAtgga > 1:2704/1‑297 (MQ=255) ttACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGTCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGAc < 1:591022/299‑1 (MQ=255) gCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGa > 1:334544/1‑299 (MQ=255) cTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAg > 1:712434/1‑299 (MQ=255) cTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTg < 1:165750/299‑1 (MQ=255) gCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTg > 1:304896/1‑299 (MQ=255) cACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGa < 1:232047/299‑1 (MQ=255) tctctgccGACAAGATTTTGCCGGAGGCGCCCCTGTAAGAAAAAGCAGACATGAAGAAGTGCGATATGCATCCGGTTATTCACCCGCGGTCTGCGGCGGTGGATCCGGCCTGGGAAGCGAAAAGCGAGTGGGAAATTTACAAAGCCATCGCGAAGCCATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGt < 2:682181/293‑1 (MQ=255) tcatTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGACGATGGATGGGAAAGAATGGAAAAAAGGCGAGTGCGACCTGAGCCCTGGTAAAACCGCGCca > 1:416730/1‑299 (MQ=255) gccaggggtcGAAAAAGAGCACATACATCCTTGCGACGTGCATCCGTTTACTCACCCCTTGTCTGGGGCGTGCTGTCCCGCCTGGGAGGCGAAAAGCGACTGGGAAATTTACACACCCAGCGCAAAGACCGTCTCCGTAGTGTGCGTCGGCCCTCTGGGTAAAGAAGCCGACATCGGCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGCCTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTag < 2:14091/290‑1 (MQ=255) gACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTag > 1:581922/1‑299 (MQ=255) ccTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGACCTGGCGCAGCCGCTGGAGGTGAAAGACTGGAAAAAAGGCGAGTGCGCCCTGGCCCCTGGGAAACACGCCACACACAGTACGGTCGAagag > 2:613953/1‑299 (MQ=255) gAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGCATGGAAAAAAGGCGAGTGCGACCTGATCGCTGGTAAAAACGCGCCCCACAATACGGTGGGGGACCGCGATTa > 2:483846/1‑299 (MQ=255) aTGAATGCTTGGGGTGTGCATCTGGTTATTCAGCAGTGGTCTGCGGCGGTCGATCCGGGCTGGGAAGCGAAAAGCGCCTGGGAAATTTCCAAAGCCCTCGGGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGAACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTa < 2:97497/299‑1 (MQ=255) tGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTAc > 1:519464/1‑299 (MQ=255) ttCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACGTACGAACGCt > 1:75772/1‑299 (MQ=255) ctCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGTAGCGAAAAGCGACTGGGAAATTTCCAAAGCCATCGCGAAGACAGTCCCCGCAGTGTGCGTCGGTCCTCAGGGTAAAGCAACCGACATCGTCAAGCTGCCTATGCAGCACGACTCGCACGCGAACCTGGCGCAGCCCGTGGATGGAACAGACGGGAAAAACGGCGAGTGCGGCCCAACCCCGCGAAAACAAACGCCAAACATACACAGCGACGAGCGCGAGTAACCGGCGACTAAGGAACCCTTTAccctactc > 2:469833/2‑293 (MQ=255) aTCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCTAAAAGCGACTGGGAAATTTACAAAGCCATCGCGACGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACCTCGTCACGCTGCCTACCCAGCACGACTCTGCCGCCGAACTGGCGCACCCCCCGGATGTGAAAGACTGGAAAAAAGGCGAGTGCCACCCGATCCCCTGCAAAAACACGCCACACACACTGGTCGTACACCGCGCATATACGGCTGCTTACCGACACTTTCCctctcac > 2:450216/1‑296 (MQ=255) aTCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATc < 1:185971/299‑1 (MQ=255) aTCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATc > 1:393150/1‑299 (MQ=255) cGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGc > 1:448201/1‑299 (MQ=255) cGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGc > 1:242801/1‑299 (MQ=255) tATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGc > 1:456685/1‑299 (MQ=255) gcccGCGGTCGGGGTCGGTCGAGCGTGCCTGGGGAGGGAAAAGGGAATGGGGAATGTAAAGAGACTGGGCTAAGCGAGTCTCCGGAGTGTGCGTCGGTCAGTTGGGTAAAGAAACCGACATCGTCAGGCGGCCTTAGCAGCACGACTCTGCCGCTGAACGGGCGCAGCCGCTGGGTGTGAAAGACTGGAAAAAAGGCGAGTGCGGCCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATg < 2:261427/298‑1 (MQ=255) gTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATgg > 1:426893/1‑299 (MQ=255) ggCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAg < 1:483846/299‑1 (MQ=255) ggAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCTGCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTTGAAAAAAGTCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTg < 1:300627/299‑1 (MQ=255) gCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTg < 1:211818/299‑1 (MQ=255) aaaGCGACTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAac > 1:196912/1‑299 (MQ=255) gACTGGGAAATTGCCAAAGCCATCGCGAAGACAGTCTCCCAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACAGCGGCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCa < 2:712434/299‑1 (MQ=255) aCTGGGAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCag > 1:111431/1‑299 (MQ=255) gAAATTTACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCga > 1:441349/1‑299 (MQ=255) tttACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATg > 1:102422/1‑299 (MQ=255) ttACAAAGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAACCCGACCTCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGGGAAAGACTGCAAAACAGGCGAGTGCGCACTGACCCCTGGTAACACCGCGCCACACATTAAGGCCGTCGAGCGCGATTATCCAGCGACTTACCACCGCTCTACCCCCACCGCCCCGCTCATGGACACAACGGGCAATGCCGGGACATGGATAGACCGGAACCCCCAAAGcagatcgg > 2:655727/1‑292 (MQ=255) cAAAGCCGGCGCGAAGACATGCGCCGAAGGGGGCGGCGGTCAGCGGGGGAAAGAAACCGACATCGGCACGCGGCCTATCCAGCACGACTCGGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATc < 1:155941/299‑1 (MQ=255) aaaGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATct > 1:663050/1‑299 (MQ=255) aaaGCACTCGGGAACACATTTCCCGAAGTGTGCGTGGGTCACTGGGGTAAAGAAACCGGAACCCGCCCGCTGCCTATCCAGCACGACGCTGCCGCTGAGCTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATct < 2:334544/299‑1 (MQ=255) aGCCATCGCGAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACATCTATCGGCCCTCTGATGGAGAAAATCGGTAATGGCGGTAACGGGATTGCCTGGAACACCCAGAGCGAGATGGATctgc > 1:19839/1‑299 (MQ=255) cgcgAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTa > 1:421959/1‑299 (MQ=255) cgcgAAGACATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTa > 1:59309/1‑299 (MQ=255) gaagacATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGc > 1:89768/1‑299 (MQ=255) aagacATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCt > 1:695951/1‑299 (MQ=255) | GGAGCACGGTATCCAGGGTAAAGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATTTACAAAGCCATCGCGAAGAAATTCTCCGAAGTGTGCGTCGGTCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCACGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCTGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCT > CP006584/1324141‑1324728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |