Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006584	814,037	G→C	T139S (ACC→AGC)	gltA ←	type II citrate synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006584	814,037	0	G	C	100.0%	158.7 / NA	48	T139S (ACC→AGC)	gltA	type II citrate synthase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (27/21);  total (27/21)

AGGTAGAGGCGTTCTGTTCATGGTCAGCGTGCAGGATCAGAATACGGTCCATAGCACGTTCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGGTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGTAATTTTAGATTCGCAGGATGCGGTTGAAGTGAAGCCTGGGTCAAAGGTGAA  >  CP006584/813744‑814332                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                          aGGTAGAGGCGTTCTGTTCATGGTCAGCGTGCAGGATCAGAATACGGTCCATAGCACGTTCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATa                                                                                                                                                                                                                                                                                                      >  1:41676/1‑299 (MQ=255)    tAGAGGCGTTCTGTTCATGGTCAGCGTGCAGGATCAGAATACGGTCCATAGCACGTTCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACc‑a                                                                                                                                                                                                                                                                                                  <  1:136851/299‑1 (MQ=255)     agagGCGTTCTGTTCATGGTCAGCGTGCAGGATCAGAATACGGTCCATAGCACGTTCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCAAGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCACCGCGCCGCCAAAACc‑ac                                                                                                                                                                                                                                                                                                 >  2:433231/1‑299 (MQ=255)                                       aGAATACGGTCCATAGCACGTTCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATATTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGaa                                                                                                                                                                                                                                                               >  1:65598/1‑299 (MQ=255)                                                 ccATAGCACGTTCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACAGGCATAGGAGAGATCGTTGCGAGGATAAACAAATGGCTGAACAATGGAATAATTGTAACACATAGCGACCATGGTCGGCATTTTAGACATCAGGCGGAACGCGGCAATTTCACAATGACGAGGATTGTTAAAATCCATAAAGTCGTGATAGAACGCCGCCCGCGCGCCTCCAAACCC‑ACAAATGAGTGCCATGGGAGGTGAGTCGCGTCGGAAAGCATGGaat                                                                                                                                                                                                                                                     >  2:159697/1‑298 (MQ=255)                                                  cATAGCACGTTCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACa                                                                                                                                                                                                                                                    >  1:69715/1‑299 (MQ=255)                                                        tctttaaaGAATCGGATTAATGTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTAACGGCATAGGGGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACggg                                                                                                                                                                                                                                              <  2:429409/292‑1 (MQ=255)                                                        aCGTTCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACggg                                                                                                                                                                                                                                              <  1:56894/299‑1 (MQ=255)                                                        aCGTTCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACggg                                                                                                                                                                                                                                              <  1:539454/299‑1 (MQ=255)                                                           ttCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACgggaga                                                                                                                                                                                                                                           >  1:429409/1‑296 (MQ=255)                                                              cAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCt                                                                                                                                                                                                                                        <  1:433231/299‑1 (MQ=255)                                                                  aTCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTc                                                                                                                                                                                                                                    >  1:703707/1‑299 (MQ=255)                                                                                          cACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAACCAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCCATTTCACGATGACGAGGATTGTTAACATCCAGCCAGTCGTACTAGAACGCCGCCAGCGCGCCGCTACTACC‑CACCATCACTCTCATTTGCTGTAAGACGCGACGGAAAGCGTGGACAACACGGGCAATTCGTATGTGGAGCCTCGTATGACggtccaa                                                                                                                                                                                                            >  2:586596/1‑294 (MQ=255)                                                                                           aCGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGAATTGTCAACATCCACAGAGTCGTGATAGAAAGCCACCGACGCGCCGCCAATACCAACACA‑CCCTGCCATTGGTGGTGAGCAGCCACGGCAAGAGTGGACACGACGGTGAATTGGCTCGTGGATGACgg‑gtgacgggtgacac                                                                                                                                                                                                          >  2:639514/1‑297 (MQ=255)                                                                                            cGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCg                                                                                                                                                                                                          <  1:84864/299‑1 (MQ=255)                                                                                                    agaACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTa                                                                                                                                                                                                  >  1:595610/1‑299 (MQ=255)                                                                                                                   ggAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGt                                                                                                                                                                                   <  1:452206/299‑1 (MQ=255)                                                                                                                    gAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGtt                                                                                                                                                                                  <  1:658372/299‑1 (MQ=255)                                                                                                                         tACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGa                                                                                                                                                                             >  1:242733/1‑299 (MQ=255)                                                                                                                                ataggggatggcGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACCTCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGtt                                                                                                                                                                     <  2:595610/288‑1 (MQ=255)                                                                                                                                aTAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGGCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGtt                                                                                                                                                                     >  1:78126/1‑299 (MQ=255)                                                                                                                                             ttgtcaggttAAAAAAATGGCGGACCATAGGAAAATTTGTTACACATGGGGGCCTTGGTCGGCATGTTCGGCAGCAGGCGGATGGCGGCAATTGCACAATGACGTGGATTGTTAACATCCAGCGAGTGGTGATAGAACGACGACAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTcag                                                                                                                                                        <  2:698968/290‑1 (MQ=255)                                                                                                                                               gcgcGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTcagca                                                                                                                                                      >  1:449680/1‑299 (MQ=255)                                                                                                                                                 gcgGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAgg                                                                                                                                                    <  1:114825/299‑1 (MQ=255)                                                                                                                                                         aCAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTTCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACa                                                                                                                                            >  2:235981/1‑299 (MQ=255)                                                                                                                                                             aTGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACt                                                                                                                                        >  1:35197/1‑299 (MQ=255)                                                                                                                                                                      cAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGTCGGAACGCGGCAATTTCACGATTACGCGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCCCGCCGCTAATACA‑ACACATTACTTCCATTGGATGTGAGTCGCGTCGCAACGCGGGGAACAGCCGGCGTCTCTGCTCGTGGATCCTGGTATTACAGTTCACCGTAGTTTTCAATTCATCAGAATTTTCCTTAGT‑GGGTCTTACTCCATCTAGACAGATGAAACAAACTTCAAGGtta                                                                                                                               >  2:622121/1‑297 (MQ=255)                                                                                                                                                                               aCTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCg                                                                                                                      <  1:389487/299‑1 (MQ=255)                                                                                                                                                                                cTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCgg                                                                                                                     >  1:693409/1‑299 (MQ=255)                                                                                                                                                                                          aTCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAAGTTCACGATGACGAGGAGTGTTAACATCCAGCGCGTCGTGATAGAACGCCGCCAGCCCGACGCTAATACC‑ACACATTACCGCCCTTGGAATTTAGTCGCGACCGAAAGCGTGGCACAGACGGGTAAACTGCTCGTGGATCCTGGGATGAAGGGTCACCGTGGTTTTAATGTCGTTCTAACCTTCCTGAGTGGGGTTTTTCA‑CATTCAGAAGGTCTTAACAAACGTTCCGGTCGTTATaaaacgttacccagtc                                                                                                           >  2:428906/1‑285 (MQ=255)                                                                                                                                                                                                    tGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCggg                                                                                                 >  1:99487/1‑299 (MQ=255)                                                                                                                                                                                                                  gACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTgcag                                                                                   >  1:311607/1‑299 (MQ=255)                                                                                                                                                                                                                   aCAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGAAGGGTCACCGTAGTTTTAAATTCGTCATAATGTTCCTGAGT‑CGGGTTTTCACCATTCAGCAGGTGTTAACAAACTTCCCGGCCGTTAACATCGGTCGCACGCTTACCGAAGCGGACACCGGGGGgcaga                                                                                  >  2:36976/1‑298 (MQ=255)                                                                                                                                                                                                                    cagcagGCGGAACGCGACAATTTCACGATGACGAGGATTGTTAACATCCAGCGCGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTgcagca                                                                                 <  1:416917/299‑1 (MQ=255)                                                                                                                                                                                                                            ggAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAg                                                                                                                                                                                                       <  1:88672/174‑1 (MQ=255)                                                                                                                                                                                                                            ggAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAg                                                                                                                                                                                                       >  2:88672/1‑174 (MQ=255)                                                                                                                                                                                                                                                tGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGt                                                     <  1:235981/299‑1 (MQ=255)                                                                                                                                                                                                                                                    gAGGATGGTTACCATCCAGGGAGTCGTGACAGAACGCCGCGAGCGCGCCCCTAAAACC‑ACACATGACTGCCATTGGATGTGAGGCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGTAAtt                                                 <  2:35197/299‑1 (MQ=255)                                                                                                                                                                                                                                                        aTTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCAAGCGCGACGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGTAATTTTAg                                             >  1:203368/1‑299 (MQ=255)                                                                                                                                                                                                                                                            ttAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGTAATTTTAGATTc                                         <  1:467458/299‑1 (MQ=255)                                                                                                                                                                                                                                                             tAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGTAATTTTAGATTCg                                        <  1:97844/299‑1 (MQ=255)                                                                                                                                                                                                                                                               caacccgccgcggcGTGGTAGAACGGCGTGAGCGCGCCGCTAATACC‑CAGCATGACTGGCATTGGATGGGAGTCGCGCCGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAAGTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACGTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGTAATTTTAGATTCGCa                                      <  2:69715/286‑1 (MQ=255)                                                                                                                                                                                                                                                                             gTGATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGGAGTTTTAAATTCGGCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGCTGGAACAAAATGCCAGGTAGAGAACATCGGTCCCAATCCGGCCTACAGGGAGACAGCTCTGCAGAAAAAACCACACCTCACAATCAATCAAACAAATTAGAGATTCGCAgtagatggctgaag                        >  2:263955/1‑286 (MQ=255)                                                                                                                                                                                                                                                                               gATAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGTAATTTTAGATTCGCAGGATGCGGTtgaagtg                      >  1:450232/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                aTAGAACGCCGCCAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGTAATTTTAGATTCGCAGGATGCGGTtgaagtga                     >  1:15401/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                         cgccAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCggg                                                                                                 <  2:527339/214‑1 (MQ=255)                                                                                                                                                                                                                                                                                         cgccAGCGCGCCGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCggg                                                                                                 >  1:527339/1‑214 (MQ=255)                                                                                                                                                                                                                                                                                                   ccGCTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGTAATTTTAGATTCGCAGGATGCGGTTGAAGTGAAGCCTGGGTCAAAGGTGaa  <  1:36976/299‑1 (MQ=255)                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                          AGGTAGAGGCGTTCTGTTCATGGTCAGCGTGCAGGATCAGAATACGGTCCATAGCACGTTCCAGAATCGGATTAACTTCATACGGTTCGCACGGCGTGGAGAACATCATATTCAGGAAGTTACCGGCATAGGAGAGATCGTTGCGCGGATAAACAAATGGCTGACCAATGGAATACTTGTAACACATCGCGGCCATGGTCGGCATTTTCGACAGCAGGCGGAACGCGGCAATTTCACGATGACGAGGATTGTTAACATCCAGCGAGTCGTGATAGAACGCCGCCAGCGCGCCGGTAATACC‑ACACATGACTGCCATTGGATGTGAGTCGCGACGGAAAGCGTGGAACAGACGGGTAATCTGCTCGTGGATCATGGTATGACGGGTCACCGTAGTTTTAAATTCGTCATACTGTTCCTGAGT‑CGGTTTTTCACCATTCAGCAGGATGTAACAAACTTCCAGGTAGTTAGAATCGGTCGCCAGCTGATCGATCGGGAAACCGCGGTGCAGCAAAATACCTTCATCACCATCAATAAAAGTAATTTTAGATTCGCAGGATGCGGTTGAAGTGAAGCCTGGGTCAAAGGTGAA  >  CP006584/813744‑814332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑