New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	917080 =	NA (NA)	21 (0.760)	21/580	0.4	100%	intergenic (+88/‑191)	LY180_04320/LY180_04325	heme ABC transporter ATP‑binding protein/hypothetical protein
	?	CP006584	= 2414713	0 (0.000)					coding (1017/1644 nt)	LY180_11545	multidrug ABC transporter ATP‑binding protein

CACCTGGATATGGAATCCATCGAGTCACTGAACATGGCGCTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAACCGGACAGTATCATGGACCGGTTTTCCCGGTAATCCGTATTTGCAAGGTTGGTTTCACTATGGAACATGAACTTCATTATATCGGTATCGACACCGCTAAAGAGAAACTGGATGTCGATGTGTTGCGTCCTGAT  >  CP006584/916801‑917345                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                          caccTGGATATGGAATCCATCGAGTCACTGAACATGGCGCTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGc                                                                                                                                                                                                                                                         >  1:76395/1‑298 (MQ=255) caccTGGATATGGAATCCATCGAGTCACTGAACATGGCGCTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATAGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGc                                                                                                                                                                                                                                                         <  1:210282/298‑1 (MQ=255)   acTGGATATGGAATCCATCGAGTCACTGAACATGGCGCTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTAGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCATGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTACAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGAAGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATAACACCAGTGCag                                                                                                                                                                                                                                                       >  1:157094/2‑298 (MQ=255)            ggAATCCAACGAGTCACTGAACATGGCGCTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCg                                                                                                                                                                                                                                              >  1:29179/1‑298 (MQ=255)                        gTCAATGAACATGGCGCTGGAACTGTATCAGTGCACGCTTATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTAACCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTtctc                                                                                                                                                                                                                                  <  1:140890/298‑1 (MQ=255)                               aaCATGGCGCTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTTAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTctgcctgc                                                                                                                                                                                                                           <  1:282075/298‑1 (MQ=255)                                       gcTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCa                                                                                                                                                                                                                   <  1:318615/298‑1 (MQ=255)                                       gcTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCa                                                                                                                                                                                                                   <  1:242583/298‑1 (MQ=255)                                            aaCTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCg                                                                                                                                                                                                              >  1:100026/1‑298 (MQ=255)                                            aaCTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGAAAAATGAAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCg                                                                                                                                                                                                              <  1:315596/298‑1 (MQ=255)                                                       ggCACGCTGTTCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGCCCCGCATTCTGGAAATCACCCCGGAACGCGTGATGGACTTTAGCGGTAATTACTAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGCCGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCtt                                                                                                                                                                                                   <  1:190041/298‑1 (MQ=255)                                                          aCGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTggg                                                                                                                                                                                                >  1:184161/1‑298 (MQ=255)                                                                                         tCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCgg                                                                                                                                                                 >  1:283604/1‑298 (MQ=255)                                                                                                 tCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGCTACTGTCGGGGTGACGGCGGCTGATGACAAATGCACAATAGCCTGATGCGCTACGCTTACCAGGCCTTGTATTATCCCACCAGCGCAGAGAAAACCCGCCAGTTTTCTCTGCCTCAACCCCGCATGCCGCATCGAGCCTTGGGTTACAACCTGCTCCGTGGATTTATgtacgcgcacgcagt                                                                                                                                                         >  2:331325/1‑284 (MQ=255)                                                                                                     tGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTtctc                                                                                                                                                     >  1:282579/1‑298 (MQ=255)                                                                                                                   cTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAAc                                                                                                                                       <  1:6594/298‑1 (MQ=255)                                                                                                                                                                   gATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAACCGGACAGTATCATGGACCGGTTTTCCCGGTAATCCGTATTTGCAAggt                                                                                       <  1:115208/298‑1 (MQ=255)                                                                                                                                                                        ccTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAACCGGACAGTATCATGGACCGGTTTTCCCGGTAATCCGTATTTGCAAggttggtt                                                                                  >  1:132289/1‑298 (MQ=255)                                                                                                                                                                                       gATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAACCGGACAGTATCATGGACCGGTTTTCCCGGTAATCCGTATTTGCAAGGTTGGTTTCACTATGGAACATg                                                                   >  1:159594/1‑298 (MQ=255)                                                                                                                                                                                             gTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAACCGGACAGTATCATGGACCGGTTTTCCCGGTAATCCGTATTTGCAAGGTTGGTTTCACTATGGAACATGAACTTc                                                             >  1:219973/1‑298 (MQ=255)                                                                                                                                                                                                 gTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCCTGTATTATCCCTCCAGTGCAGAGAAAACCGGCCAGTGTTCTACGCCTGAAGTCCGCATGCCCTATCGAGCCTTGGGTTCTAACCTGTTGCGCAGGTTTATGCAGCGGTCTGCCTTTCCCCCAAACTGATAAACCGGACACTAACCATGACCGGTTTTCACGGTAATCCGTATTCTGACGGTGGGTGTTACGATGGCACATGTACATAATta                                                         >  2:95476/1‑298 (MQ=255)                                                                                                                                                                                                             cACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAACCGGACAGTATCATGGACCGGTTTTCCCGGTAATCCGTATTTGCAAGGTTGGTTTCACTATGGAACATGAACTTCATTATATCGGTATCGa                                             >  1:297771/1‑298 (MQ=255)                                                                                                                                                                                                                 ccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAACCGGACAGTATCATGGACCGGTTTTCCCGGTAATCCGTATTTGCAAGGTTGGTTTCACTATGGAACATGAACTTCATTATATCGGTATCGACAcc                                         <  1:30510/298‑1 (MQ=255)                                                                                                                                                                                                                         gTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGCTGCGCTTCGCTTATCAGACCTTGTATTATCCCACTAGTGCATAGAAGATTGGCCAGTTTTCTCTGCCTGCAGTCTGCATGCCGTATCGTGCCTTGGGTTCTACCCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAATGTGATAAACAGGACAGTATCATGTACCGGTTTTCCCGGTAATCCGTATTTGCCAGGTTGGTTTCACTATGGAACATGAACTTCATTATATCGGTATCGACACCGCTAAaga                                 <  1:60397/298‑1 (MQ=14)                                                                                                                                                                                                                                tGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAACCGGACAGTATCATGGACCGGTTTTCCCGGTAATCCGTATTTGCAAGGTTGGTTTCACTATGGAACATGAACTTCATTATATCGGTATCGACACCGCTAAAGAGAAACTg                          <  1:39603/298‑1 (MQ=40)                                                                                                                                                                                                                                          tgatgaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAACCGGACCGTATCATGGACCGGTTTTCCCGGTAATCCGTATTCGCAAGGTTGGTTTCACTATTGAACATGCACTTCATTATATCGGTATCCGCACCCCCCAAGACaaaactcatgccggtg                >  2:54257/1‑285 (MQ=11)                                                                                                                                                                                                                                                        aaaTAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCCGGCCTTGGGTTCTACCCTGTTGCGTAGATTCACGCCGCGGCCTGCCTTTCTCCCACAGGTATAAACCGGACGGTATTATGGACCGGTTTTCACGGTAATCCGTCTTTGCACGGTTGGTTTCACTATGGAACATGAACTTACTTATACCGGCACCGACACCGCAAAGGAGAACATGGATGACGAtgatctcccgcctatt  >  2:251120/1‑284 (MQ=11)                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                          CACCTGGATATGGAATCCATCGAGTCACTGAACATGGCGCTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTTGTATTATCCCTCCAGTGCAGAGAAAATCGGCCAGTTTTCTCTGCCTGCAGTCCGCATGCCGTATCGGGCCTTGGGTTCTAACCTGTTGCGTAGATTTATGCAGCGGACTGCCTTTCTCCCAAAGTGATAAACCGGACAGTATCATGGACCGGTTTTCCCGGTAATCCGTATTTGCAAGGTTGGTTTCACTATGGAACATGAACTTCATTATATCGGTATCGACACCGCTAAAGAGAAACTGGATGTCGATGTGTTGCGTCCTGAT  >  CP006584/916801‑917345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.