New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	2896407 =	NA (NA)	31 (1.120)	27/578	0.2	100%	intergenic (+63/+105)	LY180_13765/LY180_13770	6‑phospho‑beta‑glucosidase/transposase
	?	CP006584	3262157 =	0 (0.000)					intergenic (+107/+16)	LY180_15475/LY180_15480	GSH‑dependent disulfide bond oxidoreductase/hydrogenase 2 accessory protein HypG

CGAACATATCCGCGCAATGGGCGAAGCGATTGCAGATGGCATTCCGCTGATGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTG‑TTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCACTCAGTCTT  >  CP006584/2896110‑2896676                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                              cgAACATATCCGCGCAATGGGCGAAGCGATTGCAGATGGCATTCCGCTGATGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTG‑TTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGa                                                                                                                                                                                                                                                                               >  1:294956/1‑298 (MQ=255)      atatCCGCGCAATGGGCGAAGCGATTGCAGATGGCATTCCGCTGATGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTG‑TTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTg                                                                                                                                                                                                                                                                          >  1:195243/1‑298 (MQ=255)                       gAAGCGATTGCAGATGGCATTCCGCTGATGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTC‑TTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGCAATCGTTCTGGTGGTATAAAAAAGTGCTTGCCACTTATGGGGAACATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTAGCCGGCCTACCTAGTTCGCTCGACCCGTAGATACTGTTTTGGACCGCCAGttt                                                                                                                                                                                                                                                         >  2:84795/1‑298 (MQ=255)                                                       ctcaccaatttGGGGGGGTATTGTTTTGTTTTGCGCCTCTCCGGGTGAAATGAGCAAACGTTACGGTTTTTTCTTTG‑TTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAAGCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCAt                                                                                                                                                                                                                         <  2:294956/288‑1 (MQ=37)                                                                               tttAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTG‑TTGCCCGTGACGACGCCGGCAACGGCACGCTGACGCGCACTCGTCAGCCATCGTTCTGGTGGTATACAAAAGTGATTGCCAGTCATGGCGAAGCTTTAGAGCCACTAACCCTGCCGGATGCGGCGTGCACGCCTTACCCGGCCTACATAGTTCGTGCGACATCGAGATTCTGTTATCGCCTTCAAGTTTTTTCCCGGTCCGGTTTCCCGCATTCTCGGCCTGCCAGACACCCCGCCCGCACgcgc                                                                                                                                                                                                 >  2:152080/1‑298 (MQ=255)                                                                                     ttCGGCCTTCACGGGGTAGATGGGGAAACGGTAGGGGTTTGTTTTTGTTTGACCG‑GACGGGGCGGGCAAAGGCACGATGACCGGCACGCGTAAGAAATTGTTTTGGGGGTATAAAAAAGGGATTTGCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGtttt                                                                                                                                                                                           <  2:146354/298‑1 (MQ=18)                                                                                        cGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTG‑TTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGttttttt                                                                                                                                                                                        <  1:203892/298‑1 (MQ=255)                                                                                                                  gCTACGGTTTTGTCTTTG‑TTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTAcgccgc                                                                                                                                                              >  1:284864/1‑298 (MQ=255)                                                                                                                    tACGGTTTTGTCTTTG‑TTGACCGTGACGCCGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTAGACGGCCTACATAGTTCGTGCGACATGTCGATACCGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCCGGCATGCCAAACACAGACCCGCCAGCGGCGTGTTTTTTCTACCCTCCCGCGGtctttcgccccctc                                                                                                                                                            >  2:225919/1‑289 (MQ=25)                                                                                                                    gaCGGTTTTGCTTGTG‑TTGACCTGTACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCGTGTGGTATAAAAAAGTGATTGCCAGTAAGGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTa                                                                                                                                                            <  2:330859/297‑1 (MQ=255)                                                                                                                     aCGGTTTTGTCTTTG‑TTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTCAGCAATCGTTCTGGGGGTCTAAAAAAGTGATTGCCCGTAATCGGGCAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCCGGAACGCCTTATCCGGCCTACATAGTTCGTGCGACCTGTAGATACTGTTATGGCCTGCAACTTTTTTCCTGGGCCGGTTTCCCGGTTTGACGCCCTCGCAGACACACCCCACTAAAGCCACGTTCTTTTCCTCCCTCCCCCGCATTTTAcgcccccca                                                                                                                                                           >  2:243305/1‑293 (MQ=255)                                                                                                                      cGGTTTTGTCTTTG‑TTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTAca                                                                                                                                                          >  1:330859/1‑297 (MQ=255)                                                                                                                                         ccGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCa                                                                                                                                        <  1:159299/298‑1 (MQ=255)                                                                                                                                                     aGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTACTGGGGAAGATTTAGAGTAAGTAACCGAGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTATATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGAATGATGGATTGCCAGACACAACGCCGTCAGGCGCTGTTTTTTTCATACCTACCGCGATTTTTACTCGCCGACCGGATAATGCCTCAACGCAACACACGGCACg                                                                                                                            >  2:26133/1‑298 (MQ=21)                                                                                                                                                           cGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGAc                                                                                                                      <  1:27148/298‑1 (MQ=255)                                                                                                                                                                   tGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCAc                                                                                                              >  1:245785/1‑298 (MQ=255)                                                                                                                                                                         gcACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATa                                                                                                        <  1:240801/298‑1 (MQ=255)                                                                                                                                                                           aCGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTTACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACg                                                                                                      >  1:321292/1‑298 (MQ=255)                                                                                                                                                                                   gAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCtgt                                                                                              >  1:134029/1‑298 (MQ=255)                                                                                                                                                                                         gTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGc                                                                                        <  1:26133/298‑1 (MQ=255)                                                                                                                                                                                                   tataAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGcatca                                                                              <  1:296752/298‑1 (MQ=255)                                                                                                                                                                                                   tataAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCCcatca                                                                              >  1:191065/1‑298 (MQ=255)                                                                                                                                                                                                         aaaGTGATTGCCAGTAATGGGGCAGATTTAGCGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACCTGCAGATACTGTTATTGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGAATGCCAGACACAGCGCCGTCAGGCGCGGCGTTTTTCATCCCTTGCGCGATCTTTCCGCCGCTACCGGCGTACGCCGTGACGCACCGAACGGCCCCCCTGACTTCAGCACCACCTCCCCCCCCCGTCCCAGCTTGCTCATCATCccgc                                                                        >  2:180267/1‑298 (MQ=17)                                                                                                                                                                                                         aaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCgcgc                                                                        >  1:166076/1‑298 (MQ=255)                                                                                                                                                                                                                         aTGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCAcctttcc                                                        <  1:225919/298‑1 (MQ=255)                                                                                                                                                                                                                           ggggagcacttAGAGTAAGTTAACGTGCCGGGTGCGGCGGGAACGCCTTATCCGGCCTACGTAGTTCGGGCGACATGTAGATACTGTTATGGGCTGCAATTTTGGTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACAGAGCGCCGTCAGGCGCTGTTTTTTTCAGCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCAGCATCGCGCCGAGAATCAcctttcctt                                                      <  2:288388/289‑1 (MQ=11)                                                                                                                                                                                                                           ggggAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCAcctttcctt                                                      >  1:216459/1‑298 (MQ=255)                                                                                                                                                                                                                                    ttaggggagtgaaCCGGGCCGGAGGCGGCGGGAACGCCTTTTCCGGCGTACATGGTTCGTGCGACAGGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCGGACACAGGGCCGGCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCAt                                             <  2:134029/287‑1 (MQ=11)                                                                                                                                                                                                                                      agagTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTa                                           <  1:6006/298‑1 (MQ=39)                                                                                                                                                                                                                                                   gTGCCGGAGGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTTCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGt                              <  1:220351/298‑1 (MQ=21)                                                                                                                                                                                                                                                        ggATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCgg                         <  1:84795/298‑1 (MQ=33)                                                                                                                                                                                                                                                                          ttATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCACTCa       >  1:335118/1‑298 (MQ=31)                                                                                                                                                                                                                                                                               cGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGATTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCCCTCAGTCtt  >  1:19173/1‑298 (MQ=14)                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                              CGAACATATCCGCGCAATGGGCGAAGCGATTGCAGATGGCATTCCGCTGATGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTG‑TTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATACTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAACGCCCGTCCCCACTCAGTCTT  >  CP006584/2896110‑2896676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.