New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	4186759 =	NA (NA)	47 (1.680)	45/584	0.0	94.0%	coding (292/294 nt)	LY180_19995	hypothetical protein
	?	CP006584	4334567 =	3 (0.110)					coding (30/1734 nt)	LY180_20755	membrane protein

ATATGATACGTAAGTCAGCTACAGGTGTTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAACT‑CTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAAT  >  CP006584/4186466‑4187046                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                 atatGATACGTAAGTCAGCTACAGGTGTTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACtgatg                                                                                                                                                                                                                                                                                              <  1:13793/298‑1 (MQ=255)         cGTAAGTCAGCTACAGGTGTTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCt                                                                                                                                                                                                                                                                                      <  1:32542/298‑1 (MQ=255)           tAAGTCAGCTACAGGTGTTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGCTCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTaa                                                                                                                                                                                                                                                                                    >  1:144409/1‑298 (MQ=255)                    tACAGGTGTTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTAAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTgg                                                                                                                                                                                                                                                                           >  1:10790/1‑298 (MQ=255)                        ggTGTTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTaac                                                                                                                                                                                                                                                                       >  1:27942/1‑297 (MQ=255)                          tgtTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTaaaaa                                                                                                                                                                                                                                                                     <  1:279287/298‑1 (MQ=255)                                      gtttatcGTAATCTTGGGATGTGGGAAATGGGACACAGGTAAGCAAA‑TTCAGCCTAGTGTCGAAAAGTTTATTAAATATTTTAACGAGTCTAAAAAGAAAAGGTAACAGTGCTACGATATGACGTTAAGTTATAAAAATTTTGACAAATGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCAttaagttaa                                                                                                                                                                                                                                                         <  2:246687/292‑1 (MQ=255)                                      gTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCAttaagttaa                                                                                                                                                                                                                                                         <  1:92891/298‑1 (MQ=255)                                        tAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAgg                                                                                                                                                                                                                                                       <  1:299492/298‑1 (MQ=255)                                                aTCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCATGAAAGTTGAATTTGATGTGGATTTAGAGCACTGATGAATCCCCTAATGATTTTGTTAAAAATCATTAATTTAAGGTGGTTaca                                                                                                                                                                                                                                               >  2:2951/1‑298 (MQ=255)                                                  cTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATAcaca                                                                                                                                                                                                                                             <  1:259538/298‑1 (MQ=255)                                                     gggTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGAAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCTCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCt                                                                                                                                                                                                                                          >  1:52172/1‑298 (MQ=255)                                                       tgggtggCAAATGGTACACATGTACGCAAAGTTCA‑CCTGGTGTCGAAAAGATTATTTAAATTTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCCTTTTCAAATGCAAATGACATTCGATAACGGTGCACTCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTg                                                                                                                                                                                                                                        <  2:316359/296‑1 (MQ=39)                                                       gtagtggTACATGTCAAAAAGGTACTCAAA‑TTCTGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAATTAAGTGAAAAAGAAAAGTGAAAATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTg                                                                                                                                                                                                                                        <  2:266676/295‑1 (MQ=39)                                                           tggacgaTGGTAGAAAGGTAGTCAAA‑TTCATCCTGGTGTCTAAAAGTTTATTAAAGATTTTAACACTGTTAAAAAGAAAAGTTAACATGCATACGAGATGACGTTAAGTTATAACAATTTTGACAAAGTGTTTTTTAATTCTCGTTTTCAAATGCACATGACAGTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCat                                                                                                                                                                                                                                    <  2:325973/292‑1 (MQ=38)                                                               acaTGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACTCGATCTAAATATCAAGTCAGGCACTAAAATTGGATTTTATGTTGATGTTAAGAAATTATTAATCTCCTAATAATTTTGGTAAAAATCATTAAGTTAAAGTTAATACACATACTGTAatatat                                                                                                                                                                                                                                >  2:186/1‑296 (MQ=255)                                                               acaTGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGa                                                                                                                                                                                                                                <  1:54467/298‑1 (MQ=255)                                                                     tACACAGGTAAGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAAt                                                                                                                                                                                                                          <  2:135307/298‑1 (MQ=255)                                                                             tACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTcgc                                                                                                                                                                                                                  <  1:296272/298‑1 (MQ=255)                                                                                           ccTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCaataa                                                                                                                                                                                                     <  1:229396/298‑1 (MQ=255)                                                                                            cTGGTGTAGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAAAAAGGTGAACATGCCTACGATATGACTTTAAGTTATAAAAATTTTGACAAAGTTTTTTTTAATTATCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCaataat                                                                                                                                                                                                    <  2:222003/298‑1 (MQ=255)                                                                                                          tttATTAAAGATTTTAACGATGATAAAAAAAAAGTTGAAAATGCCTAAATTATGACGTTAAGTTTTAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCAAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGAtg                                                                                                                                                                                      <  2:203279/298‑1 (MQ=255)                                                                                                                              tGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTaca                                                                                                                                                                  <  1:328411/298‑1 (MQ=255)                                                                                                                                      cttccgatctaCATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGActctc                                                                                                                                                          <  1:228706/288‑1 (MQ=255)                                                                                                                                         aagGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCttt                                                                                                                                                       >  1:241140/1‑298 (MQ=255)                                                                                                                                             tGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCa                                                                                                                                                   >  1:267895/1‑298 (MQ=255)                                                                                                                                                 cATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATACCCTAATGATTTTGGTAAAAATCATTCAGTTAAGGTGGATACACATCTTGTCATATGATAAACTGGTTTCGCGAAAAATCAATAAACAGACAAAAAGATATGAGAACTCGATATTTTACAAGAatctctagatcgcaaa                                                                                                                                               >  2:228706/1‑288 (MQ=255)                                                                                                                                                           atatGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAAt                                                                                                                                     <  1:186/298‑1 (MQ=255)                                                                                                                                                              tGACGTGAAGTTTTAAAAAATTTGACAAAGGTTTTTTTAAGTCTCGTTTTCCAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGACAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCATAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTac                                                                                                                                  <  2:41708/298‑1 (MQ=255)                                                                                                                                                                  gTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCACGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACtt                                                                                                                              >  1:82978/1‑298 (MQ=255)                                                                                                                                                                            gaaaaTTTTGAGAAATTTTTTTTTAATTCTCTTTTTAAAATGTAAAGGACATTCGAGAACGGTTGACCCTATTTCAATTTCAATGCAGGCCAAGAAGTTGTATTTTATGTTGTTGTTGAGCACTGATGAATCACCCAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATAAACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTc                                                                                                                    <  2:275355/297‑1 (MQ=17)                                                                                                                                                                                aTTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACa                                                                                                                >  1:299465/1‑298 (MQ=255)                                                                                                                                                                                      aCAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTaa                                                                                                          <  1:2951/298‑1 (MQ=255)                                                                                                                                                                                                  ttAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGcc                                                                                              >  1:280418/1‑298 (MQ=255)                                                                                                                                                                                                    aaTTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGacaac                                                                                                                                                                                            >  1:119443/1‑202 (MQ=255)                                                                                                                                                                                                    aaTTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGacaac                                                                                                                                                                                            <  2:119443/202‑1 (MQ=255)                                                                                                                                                                                                            ttttCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACt                                                                                                                                                                              >  2:165745/1‑208 (MQ=255)                                                                                                                                                                                                            ttttCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACt                                                                                                                                                                              <  1:165745/208‑1 (MQ=255)                                                                                                                                                                                                                    tgcaaatgACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTg                                                                                                     <  2:308199/273‑1 (MQ=255)                                                                                                                                                                                                                    tgcaaatgACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTg                                                                                                     >  1:308199/1‑273 (MQ=255)                                                                                                                                                                                                                              aTTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACCCTTAAAACGCCTCAACAGCTTCACTTTGGCTTGCCACCCATTCCTTGACTTTaaactcctacc                                                                  >  2:294550/1‑290 (MQ=255)                                                                                                                                                                                                                                      aCGGTGCACCCGATCTCAATATCAAGCCAGGCCAGCAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTACGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGCTTCGCGAAAAATCAATAATCCGACAACAAGATGTGCGAACTCGCTATTTTACACGACTCACTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTCACGTTCGCTTGCCACGCACTACTTACCTGTAAAACT‑CTCCATCTTAcac                                                         >  2:139379/1‑296 (MQ=17)                                                                                                                                                                                                                                        agTGGACCAGATCTAAATATCAAGCCAGGCCAGAAAGTTTTATTTGATGTGGATGTGAAGAACTGATGAATCCTCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCAGATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAACT‑CTCACTCTTACCGaa                                                       <  2:11947/297‑1 (MQ=255)                                                                                                                                                                                                                                                   tctcAATATCAAGCCAGGACAGAAAGTTGTATTTGATGTGGAAGTTGAACACTGATCAATTCACTAATGATTTTGGTAAAAATCAGTAAGTTAAGGGTGATACACAGCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAACT‑CTCACTCTTACCGAACTTGGCCGTaa                                            <  2:144409/298‑1 (MQ=14)                                                                                                                                                                                                                                                         tatCAAGCCATGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGATAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATATTACACGACTCTCTTTACCAATTCTGCCCCGAATTACATTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGGCTTCACTGACGGTACAACTCCTCA‑TCTTAACAAAATTGGCCGTGAcactcc                                      >  2:300502/1‑293 (MQ=14)                                                                                                                                                                                                                                                                    gacagAAAGTTGTATTTGATGTGTAAGTTGAGGAATGATGAATCCACTAAAGATTTTTGTAAAAATCATTAAGTTAAGGTGGATAAACATCTTGGCATATGAGCAAATGGGTTAGCGAAAGATCGATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGAGTCTCTTTACCAATTCTGCACCGAATTACACGTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAACG‑CTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCga                           <  2:52172/296‑1 (MQ=11)                                                                                                                                                                                                                                                                       agAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAACT‑CTCACTCTTACCGAACTTGGCCGTAACCTTCCAACCAAAGCGAGaa                        >  1:139622/1‑298 (MQ=39)                                                                                                                                                                                                                                                                                tagttgttgTAGATGTTAAGCAGTGATGAATCTCCTAATGATTTTGGTAAAAATAATTAAGTTAAGGTGGATACACATCTTGTCATATGATCACATAGGTTCGAGAAATATAAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCACTTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAACT‑CTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAaacata               <  2:27942/295‑1 (MQ=11)                                                                                                                                                                                                                                                                                             tGTTGAGCACTGATGCATCCCCTAATGATTTTGGTAAACATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAGTGGTTTCGCGAACCATCAATAATCATACAACAAGATGTGCGAACTCGATCTTTTACACGAATCTCGTGCCCAATTCTACCCCTAATTACACTTCAACCTACTCACCAGCTTAACGTTGGCTACCCACGCATTACTTGACTGTAAAACC‑CTCACTCTTACCTAACGTGGCATTAACCTGCTAACCAAACCTACAACAACACAAAAcaacaacacaaa  >  2:281956/1‑292 (MQ=11)                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                 ATATGATACGTAAGTCAGCTACAGGTGTTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAA‑TTCAGCCTGGTGTCGAAAAGTTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAATTTTGACAAAGGTTTTTTTAATTCTCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTGTAAAACT‑CTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAAT  >  CP006584/4186466‑4187046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.