New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	346068 =	NA (NA)	25 (0.890)	22/586	0.4	92.6%	intergenic (‑51/‑107)	LY180_01675/LY180_01680	CadC family transcriptional regulator/hypothetical protein
	?	CP006584	= 363812	2 (0.070)					intergenic (‑39/‑249)	LY180_01770/LY180_01775	outer membrane phosphoporin protein E/gamma‑glutamyl kinase

GCTTTATTTCCGGCAAACTCCGCTTCCCAACGGCCATAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACAGCCAGACGCTGGTGGTAAAACTCGGCACCAGTGTGCTA  >  CP006584/363517‑364108                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                         gCTTTATTTCCGGCAAACTCCGCTTCCCAACGGCCATAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGct                                                                                                                                                                                                                                                                                                        <  1:147773‑M2/298‑3 (MQ=255)          cagccaaacTCGGCATCCCAACGGCCATTGCCAGTCAATTGGTCGTTAGTTTTTTTCTTGCCGTTAAAACCAAAATGGATCTAATTTTGGTCGCAATCTTTACTGTCGTGATCACTCATATAATGCATGGATTTAACTTTTCCATAGACATCCGGTGTATTTCCGTCTTTGTTATATATTTCTGCGGCCTGGACGGATGCAGATGCCACAATGGCCATCACCACTAATGCCAGAGTGCTCTTTGTCATTGTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaagcg                                                                                                                                                                                                                                                                                               >  2:70201‑M2/5‑287 (MQ=255)                                      accatgtaagttgatcGTTAATTTTTGTTGAGCCTTTAAGACCAAACCGGCTATACCTCTGTTCGCCATCTTTACTGACGTTTTCACTCATATAAGGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTGCCGGCTTGGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCAGTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaag                                                                                                                                                                                                                                                                   >  2:330585‑M2/6‑259 (MQ=255)                                                                        gacgtaattgtcagaaacaaggttgagacaagctcttgcaagctaacaccgtggcaaaacgaaacatactctcaacagttcgcgtaggcatggaagttttgcggcattctcgctacacaataagaagggaggaattactcgtggctgcaaccctactagctcaaaatttattcacacatggtgacgctttggcgaaagtatgaggggatctttcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAATTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTc                                                                                                                                                                                                                                 <  2:301498‑M2/81‑1 (MQ=255)                                                                            aaaCCAAAACGGATATAAATCTGGTCGCCAACTTTACTTTCGTTATCAATCTTATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCTGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggt                                                                                                                                                                                                                             >  2:235430‑M2/1‑221 (MQ=255)                                                                                  aaaCGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcg                                                                                                                                                                                                                       <  1:57676‑M2/298‑84 (MQ=255)                                                                                     cGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaa                                                                                                                                                                                                                    <  1:56994‑M2/298‑87 (MQ=255)                                                                                             aCTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggata                                                                                                                                                                                                                                                       >  1:208042‑M2/1‑204 (MQ=255)                                                                                             aCTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggata                                                                                                                                                                                                                                                       <  2:208042‑M2/255‑52 (MQ=255)                                                                                             aCTCTGGTCGCCATCTTTACTGTCGTGCTCACTCATATAATGCATGGCTTTAACTTTGCCATACACCTCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCACATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCACTCCTGCTTTTAATCAACCCGCAAATATCCAGCGctgatcaatccactaatgattttgctaaaaatcattcagtcaaggttgatacacatcttttcaattgatcacagtgttccaagaaaaatcaata                                                                                                                                                                                                            <  2:10506‑M2/298‑95 (MQ=255)                                                                                               tctGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCATGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCTGAGTGCTCTTTTTCATTTTCATTCATTATTTGAATTAACGCGAGAATATTCAGCGctgatgattctcataatgattttggtaaaaatctttacgttaaggtggatacacatcttttcacttaattaaatggtatcgcgaaaaatcaaaaaa                                                                                                                                                                                                          <  2:104177‑M2/298‑97 (MQ=255)                                                                                                 tGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacaca                                                                                                                                                                                                                                                   >  1:154231‑M2/1‑200 (MQ=255)                                                                                                 tGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacaca                                                                                                                                                                                                                                                   <  2:154231‑M2/255‑56 (MQ=255)                                                                                                           ttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATaaaa                                                                                                                                                                                              <  1:235186‑M2/116‑1 (MQ=255)                                                                                                                cTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGTGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgc                                                                                                                                                                                         <  1:139002‑M2/298‑114 (MQ=255)                                                                                                                                  tcgaaacgtactctcaacagttcgcttaggcatggaagctttgcggcattctggctacactataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGATATTGTTAACGATATATTACATATTAATAATATTCTTAAACAGAGTTAATCACTTAAATGTGAATTAAAAGCGTAAACAACTACCGTTACGCt                                                                                                                                                                       >  2:141413‑M2/160‑298 (MQ=255)                                                                                                                                             tttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctcttta                                                                                                                                                            <  1:260705‑M2/298‑143 (MQ=255)                                                                                                                                                  cTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaat                                                                                                                                                       >  1:104177‑M2/1‑151 (MQ=255)                                                                                                                                                   tttGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaatt                                                                                                                                                      >  1:141428‑M2/1‑150 (MQ=255)                                                                                                                                                           ttaggcatggaagttttgcggcattctggctacacaatcacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcactATTCAGCGGGACAGCCACGTTGAACACAGGCAATTTTTTCACCTGAGATTGGTAAACATATATTACAGATTAATAATCTTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAATCGTAACCAACTGCCCACAGGCTTGTTGACTCATCCCAACAACACGcc                                                                                                                                              >  2:267224‑M2/135‑298 (MQ=255)                                                                                                                                                           ttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCGCCGTTGAAAACAGGAAAGGTTTTAAACTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATACAAGCGTAAACAACTGCCGCCAGGCTTTCTGATCCCGCGCAAAAaaaccac                                                                                                                                              >  2:88649‑M2/135‑295 (MQ=255)                                                                                                                                                           ttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGcc                                                                                                                                              >  1:114426‑M2/135‑298 (MQ=255)                                                                                                                                                                     aagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCAtgctttgct                                                                                                                                    <  1:324076‑M2/174‑1 (MQ=255)                                                                                                                                                                       gttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTttgcttg                                                                                                                                  >  1:231964‑M2/123‑298 (MQ=255)                                                                                                                                                                         ttaCCGTTCTTGTTTTATATTTCTGCGGCCTGTACGGATTCAGATTGCTCAATGCCCATCACCACTAATGCCAGAGTGCTCGTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaa                                                                                                                                >  2:334439‑M2/1‑128 (MQ=255)                                                                                                                                                                              gTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgact                                                                                                                           >  1:215573‑M2/1‑123 (MQ=255)                                                                                                                                                                                  ttctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTgg                                                                                                                       <  2:93651‑M2/187‑1 (MQ=255)                                                                                                                                                                                         caattgcgggcgcttgtacggatGAGAATGCCACTTAGCCCAACACCACTAAGGCCAGAGTGCTCTTTTTCATTTTCATTCCTTATTTTAATTAACGCTCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaa                                                                                                                >  2:190290‑M2/12‑112 (MQ=255)                                                                                                                                                                                                  acaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTcc                                                                                                       >  1:269176‑M2/96‑298 (MQ=255)                                                                                                                                                                                                   ggCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttg                                                                                                      <  1:38201‑M2/298‑197 (MQ=255)                                                                                                                                                                                                    aagggaagacttactcgtagctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAACGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAACTCTGTAATACAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCACGCGCAACAAACCGCACTGCTTTGTTTCACGATGGTTGTCAACAGAAAACAGACCTg                                                                                                     >  2:35130‑M2/94‑298 (MQ=255)                                                                                                                                                                                                          agacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACCCCATTCTTTGCTTGCAGATGGTTGGCAACCCACGAAAGTCCTGCTaaaa                                                                                               >  2:65604‑M2/88‑298 (MQ=255)                                                                                                                                                                                                            acttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCAGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAAcg                                                                                             <  1:302829‑M2/213‑1 (MQ=255)                                                                                                                                                                                                                            aaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCAtt                                                                             >  1:329494‑M2/70‑298 (MQ=255)                                                                                                                                                                                                                              gCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcacctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaataaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgtaaaactct                                                                           >  2:157522‑M2/1‑75 (MQ=255)                                                                                                                                                                                                                                    tagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATaaaa                                                                                                                                                                                              <  1:136747‑M2/116‑1 (MQ=255)                                                                                                                                                                                                                                    tagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATaaaa                                                                                                                                                                                              >  2:136747‑M2/62‑177 (MQ=255)                                                                                                                                                                                                                                    caccacTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgtaaaactctcactct                                                                     <  1:296873‑M2/298‑230 (MQ=255)                                                                                                                                                                                                                                               gcagggttccttttttcatttttatttCTGATTTTAATTAAAGCGCGAAGATTCAGCGctgatgaatcccctaatgattttggtaaaaatcatgaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgtaaaactctcactcttaccgaacttg                                                          >  2:147773‑M2/12‑58 (MQ=255)                                                                                                                                                                                                                                                      ttttttttttatttTTATTCTTGATTTTCTTTTACGCTGGAGTATTCGGCGctgattaatcccctcatgattttggtaaaaatcattaagttaagggggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaatatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgtaaaactctcactcttaccgaacttggccgtaa                                                   >  2:260705‑M2/5‑51 (MQ=255)                                                                                                                                                                                                                                                                    tcattCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggcttcgcgaaaaatcaataatcagacaacaagaagtacgaactcgatattttacacgactctatttaccaattctgcaccgaactacacttaaaacgactccacagcttaacgtttgctctccacccattacttcactatcaaactctcaaccttcccccacctggccttaacctgcaaaccaaaa                                     <  2:204977‑M2/298‑262 (MQ=255)                                                                                                                                                                                                                                                                         gaaattatgaggggatctctcagtATTCAGCGGGAGCGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATCTATTAAATCTGTAATAAAAGCGTAAACAACTCCCGCTAGGCTTGCTGATCCCGCGCACCAAAACGCAATGCTTTGCTTGCAGATGGTTGGCAACCGACCACAGTCCTGCTAAAACGTTCGTTTGAGATCATTTCTCCTAAAATTCAATGGCAGAGAATCATGAGTGACAGCAAGACg                                >  2:59439‑M2/25‑298 (MQ=255)                                                                                                                                                                                                                                                                            attagtagggggtctctcaggTTTCATGGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACAGCCAGACGCtg                             <  2:46655‑M2/277‑1 (MQ=255)                                                                                                                                                                                                                                                                             ttatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACAGCCAGACGCtgg                            >  1:241268‑M2/21‑298 (MQ=255)                                                                                                                                                                                                                                                                              tatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACAGCCAGACGCtggt                           >  1:183333‑M2/20‑298 (MQ=255)                                                                                                                                                                                                                                                                                                     aGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACAGCCAGACGCTGGTGGTAAAACTCGGCACCAGTGTGc    <  1:88649/298‑1 (MQ=255)                                                                                                                                                                                                                                                                                                       cGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTCAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGACGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGAGGGTTGGCAACCGACGCAAGTCCTGCTAAAACGTCCGTTTCATATCATTTTTCCTAAAATTGAATGGCAAAACATCAGGAGTGACGTCCAAACCCCTGAGGTCAAACTCTGCAACaaggtgaca  >  2:255412/1‑290 (MQ=255)                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                         GCTTTATTTCCGGCAAACTCCGCTTCCCAACGGCCATAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACAGCCAGACGCTGGTGGTAAAACTCGGCACCAGTGTGCTA  >  CP006584/363517‑364108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.