New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 1015351	1 (0.040)	23 (0.820)	21/586	0.4	95.8%	coding (178/858 nt)	LY180_04750	formate transporter
	?	CP006584	= 1154738	NA (NA)					coding (35/636 nt)	LY180_05370	hydrolase

TCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAATGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGCCGGTTTTTGCACCACATGACAAAGCGACCAATACACAAGCGATGATCGCCACTATCGCCAGCGGCAATGTGCATATA  >  CP006584/1154447‑1154985                                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                        tCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAATGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTcc                                                                                                                                                                                                                                                   >  1:233523/1‑298 (MQ=11)     ttCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAATGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCTCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCAt                                                                                                                                                                                                                                               <  1:114614/298‑1 (MQ=14)                                    ggttggCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAATGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGGGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGc                                                                                                                                                                                                                <  1:49878/298‑1 (MQ=255)                                             gTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAATGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTgg                                                                                                                                                                                                       >  1:86632/1‑298 (MQ=255)                                                                                     aGTAATGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACAt                                                                                                                                                               >  1:43452/1‑298 (MQ=255)                                                                                                           ttAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACCTCTTGTTGTCTGCTTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCACCAGTGCTCCGCATCACTGGCACTTCATAAACATTCGATTATGGCCGCGCGTGGCTGCTGGGGTAGGGATCTCGCGTGGCATCGCAGCTAACATTAAATATGTTTGTGGTGGAatt                                                                                                                                         >  2:293414/1‑298 (MQ=17)                                                                                                              aGCTGTTGTGTCTTTTTAAGTGTAATTCGGGGCAGAATTGGGAAAGAGAGGTTGGTAAAATATCGAGTTCGCGCATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCAGTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAattgat                                                                                                                                      <  2:80361/298‑1 (MQ=255)                                                                                                                                                gAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGa                                                                                                    >  1:277030/1‑298 (MQ=255)                                                                                                                                                       tAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGc                                                                                             >  1:99455/1‑298 (MQ=255)                                                                                                                                                                      aaaaTATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGcc                                                                              <  1:70915/298‑1 (MQ=255)                                                                                                                                                                       aaaTATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGCCg                                                                             >  1:168236/1‑298 (MQ=255)                                                                                                                                                                             cGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGACTATTGCCGGTTTTCATGAGCCGGttttt                                                                       <  1:293414/298‑1 (MQ=255)                                                                                                                                                                                 ttCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGCCGGTTTTTGcac                                                                   >  1:307819/1‑298 (MQ=255)                                                                                                                                                                                  ttgCAGATGTTGTTTTCTGATGATTGATTTTTCGATGAACGATTTGATTATATATAATGATTTGTATCCCCCTTAACGTAATGATGTTTAACAAAAT‑CATTGGGTGATTCATCAGTGCTCCGCATCATTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCTGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGCCGGTTTTTGcacc                                                                  <  2:86632/296‑1 (MQ=255)                                                                                                                                                                                    gCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAAGTTTGATGGTGAAATTGATTGCAGAGGTAAAATGTGTTAGCCGCCGTATCTGTGTTTTTCCGGGTTTCAGTGGCCGGTTTTTgacaccc                                                                >  2:305362/1‑292 (MQ=25)                                                                                                                                                                                                                                 gcaaatGACACGATGGGAATCTGCCTTATATTAATGATTTCTTCGAAAAT‑GATTAGGGGTGTTACCATTGCGCCGCATATCTGGAGCTTTGTTAGGTAGCGTAGCTGGCTACGAGTGGTTGATGGGGTAGGGGTCCTGCGAGGCAGCGAAGATAACATGAAAGATGTTAGGTGTGAAATTGATTGCGGCGGTGAAAGGTTTGGTTCGCTGGAGCTGAGTATTGCCGGGTTGCATGAGCCGGTTTTTGCACCACATGACAAAGCGACCAATACACAAGCGATGATCGCCACTATCGcaa                   <  2:296488/294‑3 (MQ=255)                                                                                                                                                                                                                                   atatGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGCCGGTTTTTGCACCACATGACAAAGCGACCAATACACAAGCGATGATCGCCACTATCGCCAGc                 >  1:51/1‑298 (MQ=255)                                                                                                                                                                                                                                        aCAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGCCGGTTTTTGCACCACATGACAAAGCGACCAATACACAAGCGATGATCGCCACTATCGCCAGCGGCaa            <  1:246975/298‑1 (MQ=255)                                                                                                                                                                                                                                             aTGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGCCGGTTTTTGCACCACATGACAAAGCGACCAATACACAAGCGATGATCGCCACTATCGCCAGCGGCAATGTGc       <  1:18532/298‑1 (MQ=255)                                                                                                                                                                                                                                                tgtATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGCCGGTTTTTGCACCACATGACAAAGCGACCAATACACAAGCGATGATCGCCACTATCGCCAGCGGCAATGTGCata    >  1:41919/1‑298 (MQ=255)                                                                                                                                                                                                                                                  tattccccTTAATTTGATTATTTTT‑CTAAAATGAATTGGGGTATTCATCATGGCTCCGCATCCTTGGTACTTCATTAACGTGCGTATCTGGCCGCGGGTGGTTGATGGGGTAGGGATCCTGGGCGGCATCGAAGCTAACATGAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGCCGGTTTTTGCACCACATGACAAAGCGACCAATACACAAGCGATGATCGCCACTATCGCCAGCGGCAATGTGCAtata  <  2:168236/292‑1 (MQ=255)                                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                        TCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAATGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAAT‑CATTAGGGGATTCATCAGTGCTCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGATTGCAGCGGTAAAATGTTTGACTCGCTGGATCTGATTATTGCCGGTTTTCATGAGCCGGTTTTTGCACCACATGACAAAGCGACCAATACACAAGCGATGATCGCCACTATCGCCAGCGGCAATGTGCATATA  >  CP006584/1154447‑1154985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.