New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	4496731 =	NA (NA)	133 (4.740)	112/586	0.0	NA	coding (521/1209 nt)	LY180_21450	hypothetical protein
	?	CP006584	= 4497432	NA (NA)					intergenic (+13/+464)	LY180_21450/LY180_21455	hypothetical protein/D‑allose kinase

GAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCCATTTATCATTTATGTCGTAAATATGTAATCCATGCAAAATACGTCATTTAAAGCTGGCGTTATCATAATTGGGAAATTGCGA  >  CP006584/4497142‑4497715                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                            gAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCCACCCTACTAGCTCCAAATTTATTAACACATGGTTACGCTTTGGGGAAATTAGTGGGGGGTCTCCCAGCGCTggg                                                                                                                                                                                                                                                                                      >  2:193259/1‑298 (MQ=9)         agcTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCa                                                                                                                                                                                                                                                                              >  1:137822/1‑298 (MQ=33)          cccaaccttgTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACCTGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCaa                                                                                                                                                                                                                                                                             >  2:38242/10‑298 (MQ=21)                       tGATATCATGCTGCTAATCGTCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATc                                                                                                                                                                                                                                                                <  1:204141/298‑1 (MQ=39)                       tGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATc                                                                                                                                                                                                                                                                <  1:247773/298‑1 (MQ=39)                           atCATGCTGCTATGCGCCCTAATGCTTGAACTGAAAGGTTGGCGTGGGGGGGGTCATGCTACGAAACAAGGGTGGGACCAGCACTTCCAGGCTAACACAATCAGAAATCGAATCGTACTCTCAACAGTGCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCCAACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTa                                                                                                                                                                                                                                                            <  2:162090/298‑1 (MQ=14)                                 ctgctAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGt                                                                                                                                                                                                                                                      <  1:53684/298‑1 (MQ=255)                                    ctAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCCTTCATGCTCAGAAACAAGGTTGGGAAAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACCATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAAt                                                                                                                                                                                                                                                   <  1:292733/298‑1 (MQ=255)                                        tCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCACAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGCTCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCCAAACGGCAATGCtt                                                                                                                                                                                                                                               >  2:232674/1‑298 (MQ=255)                                           cccTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTgg                                                                                                                                                                                                                                            >  1:297904/1‑298 (MQ=255)                                                   cTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTc                                                                                                                                                                                                                                    >  1:323369/1‑298 (MQ=255)                                                                     tttGCGGGCGGTGAATCTCAAAAAAAAGGTTGGGACAAGCACGTCACGGCTAACACAGTCAGAAATCGAAACGTACTATCAACAGTTCGCTTAGGCATGGAAGTTTTGCTGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAGATTTATTCACACATGGTTACGCTTTGGGGAAATGATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGta                                                                                                                                                                                                                  <  2:299558/297‑1 (MQ=18)                                                                                              aaGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCct                                                                                                                                                                                         <  1:188145/298‑1 (MQ=255)                                                                                                       aCAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCCCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAACGATTTGGCGCAATTCTTATTAACCTGTTGGGAATTTTGAGGGGCGGCTTTCGCTTCCTAttccccct                                                                                                                                                                                >  2:47327/1‑292 (MQ=18)                                                                                                                tCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTAt                                                                                                                                                                       <  1:193259/298‑1 (MQ=255)                                                                                                                   aGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTa                                                                                                                                                                    >  1:92382/1‑298 (MQ=255)                                                                                                                        aaCACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGCAATTATGAGGGGATCTCTCAGCCCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTTTGCTTTCGTGTTAGCGGTATTTAcgcta                                                                                                                                                               >  2:66316/1‑294 (MQ=255)                                                                                                                         acacAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCCACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTCTGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGAGTTGGCGTAATTCTGATTAACATGTTGGGCATATTGAGTGGCTGTTTTCGCTTGCTATTTACCATTATCGTTTTTTAcctaca                                                                                                                                                              >  2:318410/1‑294 (MQ=18)                                                                                                                                cAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCt                                                                                                                                                       <  1:66316/298‑1 (MQ=255)                                                                                                                                             gTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAAc                                                                                                                                          >  1:232134/1‑298 (MQ=255)                                                                                                                                                              gttAGGAATGGAAGTTTTGGGGCATTGTGGGTACACCATAAAAAGGGAAGTATTACGCGGGTAGGCAACACGAAGAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGGGGGGATCTCTGCGCGCTGGGCATCGTCAAAATCCTGACGTGCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCt                                                                                                                         <  2:313472/297‑1 (MQ=37)                                                                                                                                                                     aTGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCATGACGATCGCTAAACGGTAATGATTTGGCGTAATTTGGATTAACCTGGTGGGTATATTGAGTGGCGGATTTCGATTCCTCTTTCGAGTTCGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAGAGAAATAAAAAGACTGACCAAAcaa                                                                                                                  >  2:251935/1‑296 (MQ=25)                                                                                                                                                                              ttGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCga                                                                                                         <  1:140111/298‑1 (MQ=255)                                                                                                                                                                                             tACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAAcc                                                                                                                                                                                                                           <  1:115706/169‑1 (MQ=255)                                                                                                                                                                                             tACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAAcc                                                                                                                                                                                                                           >  2:115706/1‑169 (MQ=255)                                                                                                                                                                                                 caATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAAtct                                                                                      >  1:82262/1‑298 (MQ=255)                                                                                                                                                                                                  aaTAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAAtctc                                                                                     <  1:307842/298‑1 (MQ=255)                                                                                                                                                                                                            gaagaaTGACTCGTGGCTGCAAACCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATGTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCcatttatcat                                                                           <  1:42912/298‑1 (MQ=255)                                                                                                                                                                                                               gACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCcatttatcattta                                                                        >  1:180911/1‑298 (MQ=255)                                                                                                                                                                                                                      tctttgtctcAAACCTACTAAGTCACAATTTATTTGCACATGGTTAGGCTTTGGGGAAATTAGTAGGGTATCACTCAGCTTTGGGCATAGTCAAGATACTTACTGTCGCTAAACGGTAATGATTTGTGGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCGCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGTAATAACCGAGAGTTATTCATATAAATCTCCATTTATCATTTATGTCGTa                                                                 <  2:137822/289‑1 (MQ=255)                                                                                                                                                                                                                                   ccTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCCATTTATCATTTATGTCGTAAATATGTAATCCa                                                    <  1:32844/298‑1 (MQ=255)                                                                                                                                                                                                                                        taGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGCCGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCCATTTATCATTTATGTCGTAAATATGTAATCCATGCaa                                               >  1:290409/1‑298 (MQ=255)                                                                                                                                                                                                                                                         gcacaTGGTTGAGCTTTTGTGGAAGTATAAGGGGATCTCTCATCGCTGGGAATCGTCAAAATCCTAGCGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTTGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCCATTTATCATTTATGTCGTAAATATGTAATCCATGCAAAATACGTCATTTAAAGc                              <  2:160774/297‑1 (MQ=255)                                                                                                                                                                                                                                                                gTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCCATTTATCATTTATGTCGTAAATATGTAATCCATGCAAAATACGTCATTTAAAGCTGGCGtt                       <  1:47327/298‑1 (MQ=255)                                                                                                                                                                                                                                                                    cGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCCATTTATCATTTATGTCGAAAATATGTAATCCATGCAAAATACGTCATTTAAAGCTGGCGTTATCa                   >  1:216708/1‑298 (MQ=255)                                                                                                                                                                                                                                                                         tGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAAAGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCCATTTATCATTTATGTCGTAAATATGTAATCCATGCAAAATACGTCATTTAAAGCTGGCGTTATCATAAtt              <  1:175633/298‑1 (MQ=255)                                                                                                                                                                                                                                                                               aaTTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCCATTTATCATTTATGTCGTAAATATGTAATCCATGCAAAATACGTCATTTAAAGCTGGCGTTATCATAATTGGGaaa        <  1:318410/298‑1 (MQ=255)                                                                                                                                                                                                                                                                                     gAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTCCCATCATGCCGCTGGCGGCAGTTAACGCACTAACAATCCTGCTCAAACGGAATAACCGAGAGTGATTCAGATAAATCTCATTTTATCATTTATTGCGTAACTATGTAATCAATCAAACATCAGTCATTTAAAGCTGGCTTTATTATAATTGGGAAATTGCGa  >  2:228442/1‑298 (MQ=255)                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                            GAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGCGCTGGGCATCGTCAAAATCCTGACGATCGCTAAACGGTAATGATTTGGCGTAATTCTGATTAACCTGTTGGGTATATTGAGTGGCGGCTTTCGCTTCCTCTTTCGCGTTAGCGGTATTTACCATCATGCCGCTGGCGGCAGTTAACGCAATAACAATCCTGCTCAAACGGAATAACCGAGAGTTATTCATATAAATCTCCATTTATCATTTATGTCGTAAATATGTAATCCATGCAAAATACGTCATTTAAAGCTGGCGTTATCATAATTGGGAAATTGCGA  >  CP006584/4497142‑4497715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.