Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006584	230,529	T→C	D275G (GAC→GGC)	LY180_01015 ←	LysR family transcripitonal regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006584	230,529	0	T	C	100.0%	113.0 / NA	35	D275G (GAC→GGC)	LY180_01015	LysR family transcripitonal regulator
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (20/15);  total (20/15)

GACTCCGGCACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGTCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCGTTTCTGGCTTC  >  CP006584/230240‑230822                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                      gACTCCGGCACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTaa                                                                                                                                                                                                                                                                                               >  1:117395/1‑298 (MQ=255)          acaAGTGACTCTGGCGTGGTCTATAGGGCAAGGTTACTCAGTAATTTCTCCTTCTTATAATAGGAAAAACCTGGAAAGTAAACTTAAGGCACAAAATATACAGCTCGAAGCCAAAGATAAAAAAGCGATCGCCGCCCTGGAGTGCAACGGCCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGTGATTACGCCTCTCTGACAGCTCCTCCGGGAGCTGTGTGTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCa                                                                                                                                                                                                                                                                                      <  2:245912/298‑1 (MQ=255)               tGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTATTTCCTTCTTCTACTAGACGTTAAATCCTGGACAGTAATCTTAAGGCACTAACTTTACAGCTCGATGCCAAAGATAAAAAAGCTATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGTGAGCTGTTTTTACATGCGCGCTAAGGAAATCTATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGaa                                                                                                                                                                                                                                                                                 <  1:23481/298‑1 (MQ=255)                                    gggAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATACAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGACAGGTCTGGCTCCTGAATGGGATTAAACCTACATGCCAGCTCCTCCGCGAGCTGTTTTTCCATGCTCGCTAAGCAAATCGACACCAGCCCGGATCCGCGTACTTCCCGCCCGGCCGCTCAAATAAACTGCACCGAATGGCCTTGCCCCTGGacacac                                                                                                                                                                                                                                                            >  2:233355/1‑298 (MQ=255)                                       aaGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCCCTGAATGGCATTGCCACTGGCAACACttt                                                                                                                                                                                                                                                         >  1:137656/1‑298 (MQ=255)                                         ggTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTAt                                                                                                                                                                                                                                                       >  1:186660/1‑298 (MQ=255)                                          gTTACTCAGTAATTCCTTCTTCTTCTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATc                                                                                                                                                                                                                                                      <  1:316351/298‑1 (MQ=255)                                                         cttcttCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTccac                                                                                                                                                                                                                                       <  1:46665/298‑1 (MQ=255)                                                                tactaAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATtct                                                                                                                                                                                                                                >  1:78597/1‑298 (MQ=255)                                                                    aaaCGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCCATGAATGGCATTGCCACTGGCAACCCTTTATCTGCCATTAACTCCACCAATTCTCcgc                                                                                                                                                                                                                            >  1:328029/1‑298 (MQ=255)                                                                                cTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCtt                                                                                                                                                                                                                >  1:325774/1‑298 (MQ=255)                                                                                      aGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGa                                                                                                                                                                                                          >  1:222274/1‑298 (MQ=255)                                                                                          aTCTTAAGACACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCCCCTCCGGGAGCTGTTTTTCCATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACACCCCGGCCGCCGTAATAGAATGCACTGAATGGCATTGCCACCGGCACCACTTTATATGCCATTAACTCCCACACTTTCCCGCGAGCGCTTTATTTTTCCGTCAt                                                                                                                                                                                                      >  2:151476/1‑298 (MQ=255)                                                                                                                  tCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATccc                                                                                                                                                                              >  1:301439/1‑298 (MQ=255)                                                                                                                              aTAAAAATGCGGTTGCCTCCCGCGATTGCAACGCACCCCGTGTGCGCCCGAACGGTTTGTAGCCTGTGTGGGATTAGTCCTCTCTGACAGCTTCTCCGGGAGGTGTTTTGACATGCGCGCAAAGGAAATGGATAAACGCGCGGATGCGCGTACTTACCTCACGGCCGCTGTACTAGACTGCACTGCATGGCAGTGCCACGGGCAGCACGTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGAGTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAg                                                                                                                                                                  <  2:226205/298‑1 (MQ=255)                                                                                                                                     cgCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCCCTCACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTATCGCACGGCCGCCGTAATAGACTGCACTGAATGTCATTGACACCGGCCACACTTTATCTGACATTAACTCCACCCATCCTCCGCACGCGATTTCTTTGTCGCTTCTGTACCCCGACAAACACACAACCCCGCTCCCCCTCCGACaaacc                                                                                                                                                           >  2:62775/2‑296 (MQ=255)                                                                                                                                        gATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGACATTAACTCCACCAATTCCCCCCGAGCCATTTCTTTTTCGTACCTGTAGTCGGACAAACCACCAACCCCGTTGCCACCCAGCCaaaccctt                                                                                                                                                        >  2:280058/1‑293 (MQ=255)                                                                                                                                                     gATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTccc                                                                                                                                           >  1:291018/1‑298 (MQ=255)                                                                                                                                                               aCCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGa                                                                                                                                 <  1:37503/298‑1 (MQ=255)                                                                                                                                                                                 aaGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCAc                                                                                                               >  1:304250/1‑298 (MQ=255)                                                                                                                                                                                                aaTGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTCCCTCCACCAATTCTCCGCCAGCGCTCTCTTTGTCGATCATGTATTCGACCAAACACGCAATCCCGCTGCCACTCAGGCCAAGATGTTTCAGTGTTTCCCCCCCATTGGATGAAAAACCCTCCTTCACCCCACTGAATTGTcc                                                                                                >  2:187846/1‑298 (MQ=255)                                                                                                                                                                                                    ggATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCa                                                                                            <  1:255879/298‑1 (MQ=255)                                                                                                                                                                                                       ttAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTa                                                                                         >  1:170296/1‑298 (MQ=255)                                                                                                                                                                                                                   tcgtctctatccGTGTGCTGTTTGTGCACGTTAGCTCAGGAAATAGATAAACGCTGTGATGTGCGCACTTACGTGACGACCGCGTTAATTGACTGCACTGAATGGCATTGCCACTGGTAACACTGTATCTGACACTAACTCCACCGATTACCCCCGGTCGATTTCTTTGGCGATCATGTCGTCGGACAAACACGCAATCCCGTTGACACTCAGGCAAAGCTGTCTAAGTGTTTCCCTACTATTGTATGACAATCCGGACTTCACCTCATGTAATTGTCCATCACTACAGGCTTTCGGc                                                                             <  2:336991/289‑1 (MQ=255)                                                                                                                                                                                                                    aCAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGcc                                                                            <  1:109752/298‑1 (MQ=255)                                                                                                                                                                                                                                                      tAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAg                                          <  1:187846/298‑1 (MQ=255)                                                                                                                                                                                                                                                                 taaaaaGCCCGGAGGCCCGTACTTCCCCCACGGCCGCTGTAATAGACTGCACGGAATAGCATTGCCACTGGCAACACTGTATCTGCCATTAACGCCCCCAATTCCGCGCGAGCGATTTCTTTGTCGATCATGTAGGCGGACAAACACGCAATCCCGTTGTCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGtt                               <  2:186660/296‑1 (MQ=255)                                                                                                                                                                                                                                                                 aTAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGtt                               <  1:151476/298‑1 (MQ=255)                                                                                                                                                                                                                                                                  tAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATCTCTTTGTCGATCATGTAGTCGGACAAACACCCAAGCCCGTTGCCACTCCGGCAAAGCGGGTTCAGTGTTTCCCCACTATTGGATGACAAACCGGACTTGACCGCATGGAATTCTCCACCAATACAGGCACACGGCACGATATTGCGGGAACCGGGTCCCGGGAAACCAAGGCaaaacggttg                              >  2:15487/1‑291 (MQ=255)                                                                                                                                                                                                                                                                          cGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTCTTGGATGACAAACCGTACTTACCCTCATGTACTTGTCCATCACTACAGGCTATCGGCCAGGTATCAAGGGAAACGGGTTCCGTGAAACCCAGGCAAACACTTTCCTTTaaag                      >  2:48564/1‑297 (MQ=255)                                                                                                                                                                                                                                                                                   gTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCg             <  1:108846/298‑1 (MQ=255)                                                                                                                                                                                                                                                                                      cTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCGttt          <  1:280058/298‑1 (MQ=255)                                                                                                                                                                                                                                                                                       ttACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCGTTTc         <  1:119309/298‑1 (MQ=255)                                                                                                                                                                                                                                                                                       ttACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCGTTTc         >  1:258979/1‑298 (MQ=255)                                                                                                                                                                                                                                                                                              aCGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCCCCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAACACTGTTTCTTTAAATTGTCGACCGTTTCTGGCTTc  >  2:11856/1‑298 (MQ=255)                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                      GACTCCGGCACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCGCCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGTCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAATCGTCGATCGTTTCTGGCTTC  >  CP006584/230240‑230822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑