| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006584 | 459,705 | Δ1 bp | coding (137/276 nt) | LY180_02175 ← | transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006584 | 459,702 | 0 | C | . | 97.5% | 164.1 / ‑2.5 | 42 | coding (140/276 nt) | LY180_02175 | transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base . (18/21); minor base T (0/1); total (19/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AACGCCGGTATGGGTGACTTTAATCAGCACTTCACCTTTTTTCGGTGGTGCAACGTCAATTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCGCCCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGCTAATCGGCAGGGAA > CP006584/459415‑459994 | aaCGCCGGTATGGGTGACTTTAATCAGCACTTCACCTTTTTTCGGTGGTGCAACGTCAATTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCa > 1:264119/1‑298 (MQ=255) cGGTATGGGTGACTTTAATCAGCACTTCACCTTTTTTCGGTGGTGCAACGTCAATTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGCACGGCAGCGAt > 1:369700/1‑298 (MQ=255) gTATGGGTGACTTTAATCAGCACTTCACCTTTTTTCGGTGGTGCAACGTCAATTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCt < 1:25433/298‑1 (MQ=255) cTTCACCTTTTTTCGGTGGTGCAACGTCAATTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCCTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCCTTCAAGCACCTCTG‑CCATCAGCCCGCTAGCCG‑ACCCCAACCGGCACGCATCTGTTGGAGAACGGcctcggatta > 2:63619/1‑289 (MQ=255) ttttttCGGTGGTGCAACGTCAATTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCa > 1:422495/1‑298 (MQ=255) tttttCGGTGGTGCAACGTCAATTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGAACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCAc < 1:116073/298‑1 (MQ=255) aaCGTCAATTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGt > 1:111729/1‑298 (MQ=255) aCGTCAATTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGtt > 1:104396/1‑298 (MQ=255) cAATTCCAATCATTTCATGCGGTTTACCGGGAGAAAATCCACCGGACGCACGTGACTTTATCTCTCGATCTTCCTCCATATGGTAATTGATTCAGCTATTTAAGATAGGCTCGAACCATTTCAATATTGTCGTCAACTGATTAGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCag < 2:61606/298‑1 (MQ=255) aTTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCagag > 2:181201/1‑298 (MQ=255) tttCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTg > 1:395312/1‑298 (MQ=255) tagcgtgtacccGTGAGCAAATGCAACGGTAGCACTTTATTTCATTCCTCGCTCTTCCTCAAACTGGTAATAGTTTCAGCTATTTAAGATAGGCTCGAACCAGTGCAATAGTGTCGTCAACGGATTGTCTGACTTCGCGGCTGTAGCAGTCATTTCGGTTAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCt < 2:111729/288‑1 (MQ=255) ggAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGaa < 1:309496/298‑1 (MQ=255) aaTGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAg < 1:181201/298‑1 (MQ=255) aTGCAACGGCAGCAAGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAGTAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACTGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGt < 1:156875/298‑1 (MQ=255) caCGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCttttt > 1:395042/1‑298 (MQ=255) tCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTtcttctcttc > 1:12856/1‑298 (MQ=255) tctTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTgg > 1:283682/1‑298 (MQ=255) cTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCAtt < 1:110652/298‑1 (MQ=255) actttGGTAATGGATTCAGTTATTTAAGATAGGCTCGAACCAGGTAAATAGGGTCGGCAACGGATTGGCTGACTGCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCg < 2:104396/294‑1 (MQ=255) ggTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGCTTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCAATTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCCATCTTTTGAAGTATTCCACGGCCTTCACCATCACACTACAGCGCCCGCTCAAGAACAACACTCAGCCCACAAATACCACGCCCCACAGGAAGGACCTTTTTATTCCCTTCCAGTGTACTgtacctgccgcaccc > 2:231183/1‑284 (MQ=255) gtcgcgatttttAAGACATGCCCGAACCAGTTCACGAGTGGCGTCAACGGTTGGGCGTCGTTGGCGGTTGTAGCAGTCATTTCGGTAAAACGTGTCCCGGATATGGCTTTCAAGCACTTCTG‑CCAGCAGCCCGTTAGGCGCG‑CCCGAACGGCCGCGATCTGTTGGAGTATGGCACGGCAGTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCAGTTCGCACCTCATCATCt < 2:272913/289‑1 (MQ=255) aTTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCt < 1:17340/298‑1 (MQ=255) taggATAGGCTCGAACACGTTCAATGGGTTGTTGAACGGTTTGGCTGACTTCGCGGCTTTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCGTTCCAGCACTTCTG‑CCATCAGACCGTTCGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAatat < 2:208270/295‑1 (MQ=255) aaGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAAtata < 1:296193/298‑1 (MQ=255) tCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑TCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAgggg > 1:93684/1‑298 (MQ=255) aaCCAGTTCAATAGTGGCGTCAACGGGTTGGGTGCTTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGC‑CTTTTGTCCATCAGCCCTTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGt < 2:422495/298‑1 (MQ=255) aCCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTa > 1:263615/1‑298 (MQ=255) cAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATg > 1:407865/1‑298 (MQ=255) aaTAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATTTGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTatat < 1:47994/298‑1 (MQ=255) gCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTATATGTCAATGCATACCCCCCTATAGTATATAACACt < 1:63619/298‑1 (MQ=255) gTAGCAGTCATTTCGGGCAAGGCTTTCGCGGATAAGGCGTTCAAGCACGTCGG‑CCAGCAGCCCGTTAGCCGCG‑ACCGAAGGGCAGCGATCTGTTGGAGGATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTGCCAGAGCATCCATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGga < 2:193411/298‑1 (MQ=255) tCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCg > 1:286453/1‑298 (MQ=255) aagtgTTTCCCGGATATGGCTTTCAGGAGCTTTTG‑CTACCGTCCGATTAGCC‑CAGCCCGAACGGCAGCGATTTGTTGGAGTGTGGAACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGt < 2:12856/294‑1 (MQ=255) aactgttccgcgttatGGCCTTAAAGCACTTCTG‑CCATCAGCCCATTAGCCTCG‑TCCGAACGGCAGCGTTCTGTTGTAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTg < 2:93684/285‑1 (MQ=255) tttCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCGGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAAtg < 1:145358/298‑1 (MQ=255) cGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGc < 1:47447/207‑1 (MQ=255) cGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGc > 2:47447/1‑207 (MQ=255) cACTTCTG‑CCATCAGCCCGTTAGCCGCG‑CCCGAACGGCCGCGCTCTGTTGGAGTATGGCACGGCATTCGCCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCAGCCCTCTACTACGACGAACTCGAGACAGGACCTTTTTCTTCTCCTCCGGAGTACTGGGCATTTCGCACCTCCTCATCGGCACGCAATGTACTATAGGGGGGTCTGCTACTTTTCACTGCATCCCCCCCTATAGTATCACAGACTGGAGAATACCATGTATCCTGTCAATGTGGTTTGGAAACaatgcagaaa > 2:84103/1‑290 (MQ=255) g‑CCATCAGCCCGGTAGCCGC‑TCCCAACCGGCTGCGATCTGGTCGGGCATGCGACGGCATTCGGCCTCACCCGCCCGTGACCGGTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggg < 2:172787/298‑1 (MQ=255) cATCAGCCCGTTAGCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGCt < 1:331567/298‑1 (MQ=255) gCCGCG‑CCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCCCCTCATCCTCTCCACGCCATATACTATAGGGGGGTCTGCTAATTGTTAATGCATCCCCCCCTATAGTATATAACACTGGACAATAAAATTTACCCGGTAAATGGGGTGGGAAAACAAATAGGGAGGGGGGGGGTAATCGGACGGGag > 2:6148/1‑297 (MQ=255) | AACGCCGGTATGGGTGACTTTAATCAGCACTTCACCTTTTTTCGGTGGTGCAACGTCAATTTCAACGATTTCCAGCGGTTTACCGGGAGCAAATGCAACGGCAGCACGTGATTTCATCTCTCGCTCTTCCTCAATATGGTAATAGATTCAGCTATTTAAGATAGGCTCGAACCAGTTCAATAGTGTCGTCAACGGATTGGCTGACTTCGCGGCTGTAGCAGTCATTTCGGTCAAACGTTTCCCGGATATGGCTTTCAAGCACTTCTG‑CCATCAGCCCGTTAGCCGCGCCCCGAACGGCAGCGATCTGTTGGAGTATGGCACGGCATTCGGCATCACCCTCCAGCGACCGTTCCAGAGCATCAATCTGCCCTCGAATACGACGAACTCGAGTAAGGACCTTTTTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCACGCAATATACTATAGGGGGGTATGCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGCTAATCGGCAGGGAA > CP006584/459415‑459994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |