New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	2896407 =	NA (NA)	30 (0.730)	30/578	0.4	100%	intergenic (+63/+105)	LY180_13765/LY180_13770	6‑phospho‑beta‑glucosidase/transposase
	?	CP006584	3262157 =	0 (0.000)					intergenic (+107/+16)	LY180_15475/LY180_15480	GSH‑dependent disulfide bond oxidoreductase/hydrogenase 2 accessory protein HypG

TATCCGCGCAATGGGCGAAGCGATTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAA  >  CP006584/2896116‑2896655                                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                          tatCCGCGCAATGGGCGAAGCGATTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGt                                                                                                                                                                                                                                                    <  1:385482/298‑1 (MQ=255)   tCCGCGCAATGGGCGAAGCGATTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTa                                                                                                                                                                                                                                                  <  1:189589/298‑1 (MQ=255)    ctcttccgatctcGAAGCGATTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTAt                                                                                                                                                                                                                                                 <  1:217076/286‑1 (MQ=255)        gacatggaggAAGGGATTGCAGGTGGATTGCCGCGGA‑TGGGCGAACCCCCATGGGGGTGTATTGATTTAGTTTCGGTCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGGCTTTGTTGACCGGGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGcc                                                                                                                                                                                                                                             <  2:31720/289‑1 (MQ=255)          aaTGGGCGAAGCGATTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGAAGCCGCAGGCAACGGCACGCTGACGCCCACGCGTAAGAAATCGTTCTGCTGGTCTAAAAAAGCGCTTCCCAGTAACGGGGAAGACTTCGAGTAAGTCACCGCACCGAACGAGCCCTGAACGACTTATACGGCACAAACATTTATGGCGACCTGTACATA‑CTGGTACGTCCTg                                                                                                                                                                                                                                           >  2:279804/1‑298 (MQ=255)             gggtgaacgggttGCAGATGG‑ATTCCGGTTAGTGGGGTAAACCAAATGGGGCTGTTTTGGTTTAGTTTCCGCCTGTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGAGGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGGGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGGGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCaa                                                                                                                                                                                                                                        <  2:35438/287‑1 (MQ=255)             gggCGAAGCGATTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACAGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCaa                                                                                                                                                                                                                                        <  1:151674/298‑1 (MQ=255)             cttccgatctaTTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCaa                                                                                                                                                                                                                                        <  1:235175/288‑1 (MQ=255)                 gAAGCGATTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTCGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCCCGCTGACGCGCACGCGTAAGAAATCGTTCTGCGGGTATAAACAAGTGATTGCCAGTAATGGGGAAGATTTACAGTAAGTAACCGTTCCGGATGCGGCGTGAACGAGTTATCCGGCCTACATAGTTCGTCCGAAATGTAGAAT‑CAGTTATgagacagtaacag                                                                                                                                                                                                                                    >  2:217076/1‑286 (MQ=255)                   aGCGATTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGACTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCTGGACGACGCAGGCAACGGCACGCTTACGCGCACCCGTACGAAACCGTTATGGTGGTCTAAAAAGGTGATTGCCAGTAATGGGGAAGATTTAGAGGAAGCAACAGTTCCGGAGGCGGCGTGAACGCACTCTCCGGCATAAATGGTTAGTGGCACATGGAGACACCTGTT‑GGGCCTGCAAGctttt                                                                                                                                                                                                                                  >  2:278998/1‑298 (MQ=255)                      ggttGCAGAGCGCTTTCCGCTGA‑TGGGCTACACCACATGGGGGTGTTTTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAACCGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTcc                                                                                                                                                                                                                               <  2:315885/296‑1 (MQ=255)                       aTTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCt                                                                                                                                                                                                                              >  1:47583/1‑298 (MQ=255)                        ttGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAACAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGAGGCGGCGTGAACGCCTTATCCGGCCAACATAGTTCGTGCGACAGGTAGATA‑CATTTGTGGCCTGCCAgaaatcggaat                                                                                                                                                                                                                             >  2:235175/1‑288 (MQ=255)                                  tattctccTGA‑TGTGTTACACCAACTGGGGCTGGATTGTTTTAGTTTCCGCCTCTACGGGTGGAAGGGGCAAACGCTCAGGTTTTGTCTTTGGTGACCGTGACGCCGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTc                                                                                                                                                                                                                   <  2:116376/291‑1 (MQ=38)                                          tGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTg                                                                                                                                                                                                           >  1:403409/1‑298 (MQ=255)                                                                     aTTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCa                                                                                                                                                                                 >  1:316038/1‑298 (MQ=255)                                                                     aTTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCa                                                                                                                                                                                 >  1:84120/1‑298 (MQ=255)                                                                                 tcgtctcgtcgggggGAAAGGGGCAAAGGGTGGGGTTTTGTCTTTGTTGACCGTGGAGACGGAGGAAACGGAACGTTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGAGTGCCAGGAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGttttt                                                                                                                                                                     <  2:340898/287‑1 (MQ=21)                                                                                                gAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGAGA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCAGGTTGCCCGGATTGCAGGCATGCCAGAAAAAGCCCCCTCAGGCGGCGTTTTTTTATTCCCtttccgc                                                                                                                                                      >  2:187518/1‑293 (MQ=255)                                                                                                 aaaggggCAAAAGGTACGGTTTTGTCTGTGTTGACCGTGACGACGCAGGCAACGGCACGCTGAGGCGCACGCGGAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGa                                                                                                                                                     <  2:316038/292‑1 (MQ=255)                                                                                                    tGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGAttt                                                                                                                                                  <  1:136575/298‑1 (MQ=255)                                                                                                     gAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCCCGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATACAAAAGTGATTGCCAGTAATGGGGACGATTTAGAGTAAGTAACCGTGCCGGATGCGCCGTGAAAGCCTTATCCGGCCTACATAGTCCGTGCGACATGTAGATA‑CTGTTATGGCCTGCACGTTTTTTCCTGCTACGGTTTCCCGGATTGCAGGCATCCCAGACCCCGCGCCGCCCGGCCCTGTTTTTTTCCTCCCTTcccccacttt                                                                                                                                                 >  2:38046/1‑290 (MQ=255)                                                                                                        cAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTAc                                                                                                                                              >  1:198814/1‑298 (MQ=255)                                                                                                              cTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCt                                                                                                                                        <  1:342272/298‑1 (MQ=255)                                                                                                              cTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCt                                                                                                                                        >  1:347206/1‑298 (MQ=255)                                                                                                                                        acgacgCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTCACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCCGTTTCCCGGATTCCAGGCATGCCAGACACAGCGCCGTCCGGCGCCGTTTTTTTCATCCCTTCCGCGACTCTTCCCCCGCCCCCGGATTTCTCCGCGACGCATCgca                                                                                                              >  2:152340/1‑296 (MQ=21)                                                                                                                                                           gCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGc                                                                                           >  1:36043/1‑298 (MQ=255)                                                                                                                                                                  cgcACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCAt                                                                                    <  1:419888/298‑1 (MQ=255)                                                                                                                                                                   gcaggggTAAGAAATGGTTCTGGTGGTATAAAAAAGGGATTGCCAAGAAGGGGGAAGATTTGGAGTAAGTAACCGTTCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATa                                                                                   <  2:84120/292‑1 (MQ=255)                                                                                                                                                                    cACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATAc                                                                                  <  1:278998/298‑1 (MQ=255)                                                                                                                                                                     aCGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACg                                                                                 >  1:137276/1‑298 (MQ=255)                                                                                                                                                                               aaTCGTTTTGGTGGTATAAAAAAGTGATTGCCAGGAAGGGGGAGGAGTTAGAGTAAGTAACCGTGCCGGATTCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGc                                                                       <  2:403409/298‑1 (MQ=255)                                                                                                                                                                                        ggtggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTgcg                                                              >  1:263315/1‑298 (MQ=255)                                                                                                                                                                                                   aaaGTGCTTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCACGTTTTTTCCTGGTCCGGTTTCCCGGATTCCAGGCATCCCACCCACAGCGCCGTCACGCCCCGTCTTTTTCCTCCCTTCCGCGATCTTTCCCCCGCTCCCGGATTATCCCCCGCCGCCTCCCACGGCCGCCCCGACTCCAGCCCCCCCTACCCCACCCGTCCCTACTTccgccccctcccgc                                                   >  2:353222/1‑288 (MQ=12)                                                                                                                                                                                                   aaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCgcgc                                                   >  1:347153/1‑298 (MQ=255)                                                                                                                                                                                                              cAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATcccc                                        >  1:177845/1‑298 (MQ=255)                                                                                                                                                                                                               aGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCAcct                                       <  1:187518/298‑1 (MQ=255)                                                                                                                                                                                                                         aaGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCtt                             <  1:416294/298‑1 (MQ=255)                                                                                                                                                                                                                            aTTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGcc                          <  1:60250/298‑1 (MQ=255)                                                                                                                                                                                                                              ttAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCAt                        <  1:132411/298‑1 (MQ=40)                                                                                                                                                                                                                                agagTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAAGCACCTTTCCTTTCTTGCCATTa                      >  1:291164/1‑298 (MQ=39)                                                                                                                                                                                                                                     aagtaaCCGTGCCGGATGGGGCGTGAACGCCTTGTCCGGCTTACATAGTTCGGGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAgccgc                 <  2:162954/298‑1 (MQ=255)                                                                                                                                                                                                                                        taaCCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTTCCATTAGCCGCCAg              >  1:13680/1‑298 (MQ=37)                                                                                                                                                                                                                                                   gATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGa   >  1:112026/1‑298 (MQ=33)                                                                                                                                                                                                                                                   gATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGa   >  1:207411/1‑298 (MQ=33)                                                                                                                                                                                                                                                    aTGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGaa  <  1:279804/298‑1 (MQ=33)                                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                          TATCCGCGCAATGGGCGAAGCGATTGCAGATGGCATTCCGCTGA‑TGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCACGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAAGTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATAGTTCGTGCGACATGTAGATA‑CTGTTATGGCCTGCAAGTTTTTTCCTGGTCCGGTTTCCCGGATTGCAGGCATGCCAGACACAGCGCCGTCAGGCGCTGTTTTTTTCATCCCTTCCGCGATTTTTACGCCGCTACCGGATTATGCCGTGACGCATCGAACGGCACGCCTGACTTCAGCACTCCATACGCCACCTGTGCCAGCTTGCGCATCATCGCGCCGAGAATCACCTTTCCTTTCTTGCCATTAGCCGCCAGACGGTCGCGGAA  >  CP006584/2896116‑2896655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.