Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	CP006584	3,812,239	(AGA)2→4	coding (434/1020 nt)	LY180_18170 ←	peptide ABC transporter permease

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 3812233	1 (0.020)	37 (0.910) +AGAAGA	39/562	0.1	97.4%	coding (440/1020 nt)	LY180_18170	peptide ABC transporter permease
	?	CP006584	3812234 =	1 (0.020)					coding (439/1020 nt)	LY180_18170	peptide ABC transporter permease

CGCGGTGCGGATGTAATCCTCGCCCAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCA‑‑‑‑‑‑GAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAAT‑ACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAGATACTGCTGCCACATCGGTTTATCTAAGCCGAGTTCAGCCAGCAGCTGC  >  CP006584/3811953‑3812523                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                          cgggggtcggatggaATGCGCGCCAAGGCCTTCCAGCATGGAGGAGCGTGTCAGACGAACAATGAGCGACGGCGGAATAGGACCCAGCACAATGGCAGGCAAGAGCATATGGGCGACGGCAGCGATGAAGTTGCGGTCTTAACCCCAGATAGCGGTGTCGATCAGCATAAAACCGGTGAGCGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCATGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggc                                                                                                                                                                                                                                                                                          <  2:208875‑M1/291‑18 (MQ=255)    ggTGCGGATGTAATCCTCGCCCAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGAAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACGATATCGCTCAGGCGGCCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaggataggcatc                                                                                                                                                                                                                                                                                       >  1:233922‑M1/1‑278 (MQ=255)          gATGTAATCCTCGCCCAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtag                                                                                                                                                                                                                                                                                 <  1:330302‑M1/298‑27 (MQ=255)                            cACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggcca                                                                                                                                                                                                                                                               >  1:12126‑M1/1‑254 (MQ=255)                                  cAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgct                                                                                                                                                                                                                                                         >  1:180944‑M1/1‑248 (MQ=255)                                               cGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaa                                                                                                                                                                                                                                            <  1:150651‑M1/298‑64 (MQ=255)                                                 tgtCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatg                                                                                                                                                                                                                                          >  1:108859‑M1/1‑233 (MQ=255)                                                          cacaATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgt                                                                                                                                                                                                                                 <  1:273415‑M1/298‑75 (MQ=255)                                                             aaTGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagcagccggccagcgccaggcccacccctcagcgaaccaaaaaggacccccgttta                                                                                                                                                                                                                              >  2:242204‑M1/1‑221 (MQ=255)                                                               tGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatagagtcgcaggtcagcgacaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaac                                                                                                                                                                                                                            >  1:31441‑M1/1‑219 (MQ=255)                                                                    gcgagcgAAATACCACCCAGCACGATGGCAGGCAAGAACATTTGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTGAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcag                                                                                                                                                                                                                       <  2:12126‑M1/295‑85 (MQ=255)                                                                                 gaccagccccattggcaggaaaggtGTTATGGGGGGCGGCGTGGATAAAGTTGCCGTCTTCACCCCGGATGGGGGTGTCGGTCAGCATAAAGCCGGTTAACGGATTGGAGTCATCGAGGCACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgac                                                                                                                                                                                                          <  2:402310‑M1/286‑98 (MQ=255)                                                                                              ggcaggcaAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgacc                                                                                                                                                                                             >  1:352167‑M1/1‑188 (MQ=255)                                                                                              aggagggaagaGAATATGGGCGGGGGAAGCAATAAAGGGCGCGGCTTCAGCCCGGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGGGTCATCGAGGAGAACCATATCGCTCACGCGACCGGAGACTGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgacc                                                                                                                                                                                             <  2:375158‑M1/295‑111 (MQ=255)                                                                                                   gcaAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGTTCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagt                                                                                                                                                                                        <  1:295791‑M1/298‑116 (MQ=255)                                                                                                           atatGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGTTCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaa                                                                                                                                                                                <  1:23688‑M1/298‑124 (MQ=255)                                                                                                            tatGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaat                                                                                                                                                                               >  1:61791‑M1/1‑174 (MQ=255)                                                                                                                      ggCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcag                                                                                                                                                                     >  1:44938‑M1/1‑164 (MQ=255)                                                                                                                        cATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagac                                                                                                                                                                   >  1:323293‑M1/1‑162 (MQ=255)                                                                                                                              tAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTCACGGATTTGAGTCATCGAGGCACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCCGCGCACCGACACCAGCATGATCAGCATCATGCCCCACCAGAAGACGAAGATCGGCAGCGAGTAGCCGGTCACCGCCAGCCCAACCGCCGTGCGATCTAAAATGGAACCGCCATTAACCCCAGCCAGCCCGCCTCCCGGAATCCCCCACAGCA‑TCCCCAAAATCATCccgccgcccccacg                                                                                                                                                            >  2:103099/1‑288 (MQ=255)                                                                                                                                                  cAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggc                                                                                                                                         >  1:64539‑M1/1‑136 (MQ=255)                                                                                                                                                                     gCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttccca                                                                                                                      <  1:116772‑M1/298‑182 (MQ=255)                                                                                                                                                                        tAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGAGCAGCATCATGCCCCACCagaagaagaagatcggcatcgagcagccggtcagcgccaggccaaccgcggtgtgatcgaaaatggaccgccgtttaaccgccgccagcacgcagaccggaaaaccgaccgcagtcgcaaaaatcatcgcgcagccgcccagttccagcggggccgggaggcccggcccgaacccttcccacac                                                                                                                   >  2:239867‑M1/1‑114 (MQ=255)                                                                                                                                                                              cGGTTAACGGGTGGGGGTGATGGAGGAACACCATATCGCTAACGCGAACGGAGAAGGGCGTCAGGTTCCAGTGCGCCGAAACCCGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggat                                                                                                             <  2:387140‑M1/298‑191 (MQ=255)                                                                                                                                                                                  tAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcgg                                                                                                         <  1:118589‑M1/298‑195 (MQ=255)                                                                                                                                                                                    ccgGATGGGGGTCAAGGAGGAAGACCATTTCGCTCACGCGCCCGGAGCCGGGCGTCAGGTTCCAGGGCACCGAAACCAGCATGATCGGCAGCATGCCCCCCCagaagaagaggatcggcatcgagtagccggtcagcgccaggccaaccgcggtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggct                                                                                                       <  2:352167‑M1/297‑197 (MQ=255)                                                                                                                                                                                    aCGGGTTGGAGGCAACGAGGAACACCACAACGCTCACGGTGCCGGAGACGGGCGGCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCACGCCCCACCagaagaagaagagcggcatcgagtggccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggct                                                                                                       <  2:61791‑M1/298‑197 (MQ=255)                                                                                                                                                                                                      ggAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggcataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggaggcggcttttcattgaaatgagatc                                                                                     >  1:256745‑M1/1‑84 (MQ=255)                                                                                                                                                                                                              atatgccccccgcgagcggagcggGGCGGCAGGTTCCAGGGCACCGAACCCGGCATGATGAGCACCATGCCCCACCagaagaagacgatcggcatcgagtagccgggcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccat                                                                             <  2:108859‑M1/288‑223 (MQ=255)                                                                                                                                                                                                                 ccgctgccagcaccggggacgggGGGAAGGTTACAGTGGACCGGAACCAGGATGATCAGCAGCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcggttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgca                                                                          <  2:180944‑M1/287‑226 (MQ=255)                                                                                                                                                                                                                         gcgACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgcataacgccc                                                                  <  1:242204‑M1/298‑234 (MQ=255)                                                                                                                                                                                                                                     gggCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgcataacgccccaaatgtaatgg                                                      >  1:424731‑M1/1‑53 (MQ=255)                                                                                                                                                                                                                                          tCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgcataacgccccaaatgtaatggagata                                                 <  1:331574‑M1/298‑251 (MQ=255)                                                                                                                                                                                                                                               ttCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctctgtgaccgaaaatggaaccgcgcttaaccgcagcccgcacgcccaccggaatacccaccgcagtcgcaaaaagcatcgcgcacacgccaagttccaccctggccgggaggcgcggcacgcactctccctccacccggatgcggcttttcattgcaatgcccaaatcgccaagcaccacgccccaaagatactggagatactact                                            >  2:317421‑M1/1‑43 (MQ=255)                                                                                                                                                                                                                                                     tGCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgcataacgccccaaatgtaatggagatactgctgccaca                                      <  1:9624‑M1/298‑262 (MQ=255)                                                                                                                                                                                                                                                      gCACCGAAACCAGCATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgcataacgccccaaatgtaatggagatactgctgccacat                                     <  1:298160‑M1/298‑263 (MQ=255)                                                                                                                                                                                                                                                                   cATGATCAGCATCATGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgcataacgccccaaatgtaatggagatactgctgccacatcggtttatctaag                        <  1:92613‑M1/298‑276 (MQ=255)                                                                                                                                                                                                                                                                             atcatGCCCCACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgcataacgccccaaatgtaatggagatactgctgccacatcggtttatctaagccgagttcag              >  1:428471‑M1/1‑13 (MQ=255)                                                                                                                                                                                                                                                                                    cccACCagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgcataacgccccaaatgtaatggagatactgctgccacatcggtttatctaagccgagttcagccagcag       >  1:296936‑M1/1‑6 (MQ=255)                                                                                                                                                                                                                                                                                      ccccagaaaaagaagatgggcatagagtagccggtccgcgcccggccaaccgctgtgggatcgaaaagggaacctcgtttaaccggagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggccgggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgcataacgccccaaatgtaatggagatactgctgccacatcggtttatctaagccgagttcagccagcagct     <  2:64539‑M1/296‑295 (MQ=255)                                                                                                                                                                                                                                                                                         cagaagaagaagatcggcatcgagtagccggtcagcgccaggccaaccgctgtgtgatcgaaaatggaaccgcgtttaaccgcagccagcacgccgaccggaataccgaccgcagtcgcaaaaatcatcgcgcagacgccaagttccagcgtggcctggaggcgcggcacgaactcttcccaaaccgggatgcggcttttcattgaaatgcctagatcgccatgcataacgccccaaatgtaatggagatactgctgccacatcggtttatctaagccgagttcaaccagcagctgcg  >  1:225357‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                          CGCGGTGCGGATGTAATCCTCGCCCAGCACTTCCAGCATCGAGGAGCGTGTCATACGCACAATGACCGCCAGCGGAATAGTACCCAGCACAATGGCAGGCAAGATCATATGGGCGACGGCATCGATAAAGTTGCCGTCTTCACCCCAGATGGCGGTGTCGATCAGCATAAAACCGGTTAACGGATTGGAGTCATCGAGGAACACCATATCGCTCACGCGACCGGAGACGGGCGTCAGGTTCCAGTGCACCGAAACCAGCATGATCAGCATCATGCCCCACCA‑‑‑‑‑‑GAAGATCGGCATCGAGTAGCCGGTCAGCGCCAGGCCAACCGCTGTGTGATCGAAAATGGAACCGCGTTTAACCGCAGCCAGCACGCCGACCGGAAT‑ACCGACCGCAGTCGCAAAAATCATCGCGCAGACGCCAAGTTCCAGCGTGGCCTGGAGGCGCGGCACGAACTCTTCCCAAACCGGGATGCGGCTTTTCATTGAAATGCCTAGATCGCCATGCATAACGCCCCAAATGTAATGGAGATACTGCTGCCACATCGGTTTATCTAAGCCGAGTTCAGCCAGCAGCTGC  >  CP006584/3811953‑3812523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.