New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP006584 840689 =25 (0.600)21 (0.570) 21/524 0.9 44.0% intergenic (+68/‑82) LY180_03930/LY180_03935 tRNA‑Lys/tRNA‑Val
?CP006584 = 841381 31 (0.840)intergenic (+125/‑280) LY180_03950/LY180_03955 tRNA‑Lys/quinolinate synthetase

TTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCATCCTGAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTCGACTATCTTGTTTAGCATATAAAACAAATTACACCGATAACAGCGAATATTACGCTAATGTCGGTTTTAACGTTAAGCCTGTAAAACGAGATG  >  CP006584/841106‑841655
                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                  
ttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCATCCTGAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcac                                                                                                                                                                                                                                                              >  1:189874‑M2/1‑276 (MQ=255)
              gCAGGTTCGAATCCTGCACGACCCACCATCCTGAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTa                                                                                                                                                                                                                                                <  1:11827/298‑1 (MQ=255)
                    tCGAATCTTGCACGACCTACCACCCTTATGGATCAAAGCTGCTTAACCCCGCAATGGGTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAg                                                                                                                                                                                                                                          <  1:367962/298‑1 (MQ=14)
                      gAATCCTGCACGACCCACCATCCTGAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCAAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAACCGCTCGCGGCAACGGCCCGAAGGGCGGGCAAAGAGAGTAATCCTGACCGACCCACCCATGTAAAAAAgcc                                                                                                                                                                                                                                        >  2:228862/1‑297 (MQ=17)
                                  aCCCACCATCCTGAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcgc                                                                                                                                                                                                                            >  1:1528/1‑298 (MQ=255)
                                   cccACCATCCTGAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAATGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagt                                                                                                                                                                                                                           <  1:147750‑M2/298‑58 (MQ=255)
                                     caccaTCCTGAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttt                                                                                                                                                                                                                         >  1:75353/1‑298 (MQ=255)
                                       ccaTCCTGAATGATTAAAGCAGCATAATCCCGAAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtt                                                                                                                                                                                                                       >  1:292651‑M2/1‑237 (MQ=255)
                                          tCCTGAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGc                                                                                                                                                                                                                    <  1:301800/298‑1 (MQ=255)
                                              gAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGCGCGCAGCGAAACAACGCAGCCGCACGCGGCGACGCCCCGAAGGGCGAGCGAAGCGAGTCATCCTCACCGACCCACCAATGTAAAACACCGCCCCAAAGGCTCTTTTTTACTCtt                                                                                                                                                                                                                >  2:5894/1‑298 (MQ=14)
                                              gAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagta                                                                                                                                                                                                                <  1:142352‑M2/298‑69 (MQ=255)
                                                    ttAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagc                                                                                                                                                                                                          >  2:142352‑M2/1‑224 (MQ=255)
                                                     tAAAGCAGCATAATCCCTGAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCAt                                                                                                                                                                                                         <  1:152763/298‑1 (MQ=255)
                                                     tAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCAt                                                                                                                                                                                                         >  1:399703/1‑298 (MQ=255)
                                                        agcagcATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcag                                                                                                                                                                                                      >  1:362800‑M2/1‑220 (MQ=255)
                                                                               cGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtgat                                                                                                                                                                               <  1:228862/298‑1 (MQ=255)
                                                                                        aGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTc                                                                                                                                                                      >  1:243142/1‑298 (MQ=255)
                                                                                                gagCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttac                                                                                                                                                              >  1:162320‑M2/1‑180 (MQ=255)
                                                                                                 agCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcg                                                                                                                                                                                                                                                                                >  1:44936‑M2/1‑179 (MQ=255)
                                                                                                 agCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcg                                                                                                                                                                                                                                                                                <  2:44936‑M2/183‑5 (MQ=255)
                                                                                                     gTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATTGTCAGAGCTTACtgtg                                                                                                                                                         >  2:65328/1‑298 (MQ=255)
                                                                                                      ttGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTTCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGCGTCCTCCTGCACGACCCCCCCATGTAAAAAAGAGCACTCAAGGCGCATTTTTCCCATTCAGGCATCCTCACTTTAACTTTGTAAACCTAATGCCATCGCCCAAACTTACtcgtc                                                                                                                                                        >  2:66476/1‑294 (MQ=14)
                                                                                                      ttGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgc                                                                                                                                                        >  1:144745/1‑298 (MQ=255)
                                                                                                                        gtgggagattCGATTCCTGACCGCCCCACTAATGAAAAAAAGCTCGGTAGAGGGGTTTGTTTGGTACTTGCGATACTTAAGAGTTCGAGCGTGCAGCAGGTTTGAGTTGAGCGCGGCGAAACAACGGAGCGGCTGGCGGCGACGGCCGGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGt                                                                                                                                      <  2:218892/290‑1 (MQ=18)
                                                                                                                            cAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAACGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggacgcaatttggagtaaccatcgcattatcgggtgattagctcacctgggggagccactccccttacacgagggggtcggccggtcgatcgcgc                                                                                                                                  <  2:238451‑M2/298‑147 (MQ=255)
                                                                                                                                    aaTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGt                                                                                                                          >  1:66044/1‑298 (MQ=255)
                                                                                                                                                      aaTGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGCTACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGACGCGAGTCATCCTGCACCACCCACCAATGCAAAAAAGCGCCCTCAAGGCGCTTTTTTGCTATTCCGGCATCCTCAATTTCATTTTGTCAACCTGAGGACATCTTCAGAGCTCACTGTGCAAGCAACTCTACTTCAGTTGAATTAAGCGTAGTTCGAAGTACtttttc                                                                                                        >  2:54146/1‑296 (MQ=17)
                                                                                                                                                            aaaaaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGACCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAGTGACTTTTCCccacca                                                                                                  >  1:176797/1‑298 (MQ=255)
                                                                                                                                                                       tAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcgggtcgttagctcagttggtagagcagt                                                                                       >  1:61598‑M2/1‑109 (MQ=255)
                                                                                                                                                                        aaaGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccccccgggtcgttagccccgttggtagatcagtt                                                                                      <  2:388918‑M2/298‑191 (MQ=255)
                                                                                                                                                                               cTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAGTGACTTTCCCCACCATTCGACTATCTTGTTTAGCa                                                                              <  1:65328/298‑1 (MQ=255)
                                                                                                                                                                                      gCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcgggtcgttagctcagttggtagagcagttgacttttaatcaat                                                                        >  1:388918‑M2/1‑94 (MQ=255)
                                                                                                                                                                                            tGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAg                                                                                                                  >  1:348885/1‑250 (MQ=255)
                                                                                                                                                                                            tGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAg                                                                                                                  <  2:348885/250‑1 (MQ=255)
                                                                                                                                                                                                aTACTTAAAGATTCGAACCGGCAGCAGGTTTGAGTTGAGCGAAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTCGACTATCTTGTTTAGCATATAAAACAAATTaca                                                              <  1:66476/298‑1 (MQ=255)
                                                                                                                                                                                                         atctcgaACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcc                                                     >  1:294575‑M2/4‑75 (MQ=255)
                                                                                                                                                                                                          aTTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcct                                                    <  1:60954‑M2/298‑225 (MQ=255)
                                                                                                                                                                                                              gAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccacccctaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttaaaaggagggggtcggcggttcgatcccgtcatcacccaccacccgggccgttagcccagttggtagggcagttgacttgtaacacatttggcgcaggttggaatcctagaa                                                <  2:294575‑M2/298‑229 (MQ=255)
                                                                                                                                                                                                              gAACCGGCAGGAGGTTTGGGGTGCGCGCGGCGAAACAACGGGGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgaccaaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcac                                                >  2:60954‑M2/1‑70 (MQ=255)
                                                                                                                                                                                                                  cTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacc                                            <  1:59949‑M2/298‑233 (MQ=255)
                                                                                                                                                                                                                  cTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTGTAAAAAAGCGCCCTAACAGCGCTTTTTTGCTATTAAGGCACCCTCAATTTCACTTTGTAAACCTGATGACCTCGTCAGAGCTTACTGTGCAAGCACCTCTACGTCGGTGGACTTAGGCGTAATTCGAGGGACTTTTCCCCACCATTAGACGATCATTTTTACCATAACAAAAAAATTACACCGAAAACACCCAATAtt                                            >  2:73980/1‑298 (MQ=21)
                                                                                                                                                                                                                   cttccgtcgttggggttgggcgcagcgaAACAACGGGGCCCGCTGGGGCGGCGGCCCGAAGGGGGagcgaagcgagtcatccggcacgacccaccacgaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgaccc                                           >  2:17200‑M2/9‑65 (MQ=255)
                                                                                                                                                                                                                       gcagGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGGCCGAAGGGCGCGCGAAGCGGGTCATCCGGCACGAACCACCCAGGTAAAAAAGCGCCCTAAAAGCGCTTTTTTGCTAATCAGGCATCCACAATTTCAATTTGTAACCCTGATTACAGCGCCAGAGCGTACTGTGCAAGCAACCCTACCTCCGTGGACTTAGTCCGCAGTCCAGTGACTCTTCCCCACCACTCTAATATCCTGTTTAGCATAAAAAACAAATTAAACCGATAACAGCGCATATTACGCt                                       >  2:398157/1‑298 (MQ=18)
                                                                                                                                                                                                                       gcagGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccacca                                       <  1:355386‑M2/298‑238 (MQ=255)
                                                                                                                                                                                                                            tttGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTCGACTATCTTGTTTAGCATATAAAACAAATTACACCGATAACAGCGAATATTACGCTAATGt                                  <  1:401449/298‑1 (MQ=255)
                                                                                                                                                                                                                             ttgagttgagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGCACTCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCAGTGGCATTAGGCGAACATCGAGTGACTTTTCCCCACCATTCGACTATCTTGTTTCGCTTACAAAACAAATTACACCGCAAACACCCAATATTACGCTAAtctc                                 >  2:102884/1‑298 (MQ=25)
                                                                                                                                                                                                                              tgagttgagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaagatcggaag                                <  1:17200‑M2/298‑245 (MQ=255)
                                                                                                                                                                                                                                        gcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggtt                                                                                                                                           >  2:330470‑M2/1‑44 (MQ=255)
                                                                                                                                                                                                                                        gcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggtt                                                                                                                                           <  1:330470‑M2/181‑138 (MQ=255)
                                                                                                                                                                                                                                             gAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagcgagtcatcctgcacgacccaccactaattacggtgggttcggtggaagtagtttgtagtatccagcgcagtatcgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaattttaacatcaaactcagatg                 >  1:238451‑M2/1‑39 (MQ=255)
                                                                                                                                                                                                                                             gAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTCGACTATCTTGTTTAGCATATAAAACAAATTACACCGATAACAGCGAATATTACGCTAATGTCGGTTTTAACGTTAAGc                 <  1:5894/298‑1 (MQ=255)
                                                                                                                                                                                                                                              aaaCAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTCGACTATCTTGTTTAGCATATAAAACAAATTACACCGATAACAGCGAATATTACGCTAATGTCGGTTTTAACGTTAAGcc                >  1:207669/1‑298 (MQ=255)
                                                                                                                                                                                                                                                acaacGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTCGACTATCTTGTTTAGCATATAAAACAAATTACACCGATAACAGCGAATATTACGCTAATGTCGGTTTTAACGTTAAGCCTGt             <  1:303078/298‑1 (MQ=255)
                                                                                                                                                                                                                                                          cGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTCAAAAAGCGCCCTAAAGGCGCTTCTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAGGCAACTCTATGTCGGAGGAATTAGGCGTAATTCGAGTGACATATCCCACCCATTCGACTATCTTGTTTAGTATATAAGACAAATTAAACCGATAAAAGCGAATATTACGCGAATGCAGGTTTTCCAGTAAAGACTGCAAAAagagc    >  2:234526/1‑297 (MQ=37)
                                                                                                                                                                                                                                                             cTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTCGACTATCTTGTTTAGCATATAAAACAAATTACACCGATAACAGCGAATATTACGCTAATGTCGGTTTTAACGTTAAGCCTGTAAAACGAGATg  <  1:120250/298‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                  
TTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCATCCTGAATGATTAAAGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTTAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTACGTCGGTGGAATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTCGACTATCTTGTTTAGCATATAAAACAAATTACACCGATAACAGCGAATATTACGCTAATGTCGGTTTTAACGTTAAGCCTGTAAAACGAGATG  >  CP006584/841106‑841655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.