| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006584 | 1,459,895 | C→T | T49T (ACC→ACT) | LY180_06935 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006584 | 1,459,895 | 0 | C | T | 97.4% | 120.9 / NA | 38 | T49T (ACC→ACT) | LY180_06935 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (18/19); total (19/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
GGCCATGAAAACATTGCTCGGCGAGAGGATTATGGATCGCATGACCATGAACGGCGGGCGATGGGTGAATTTTAACTGGGAGAGCTGGCGTCCGAATGTCGTCCAGCCAGGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACCTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGCTCGTCTGATTCGCGTTAATCAGAACGGTAAATTTCGTTACTGCATGCCGGGCGGTAATTTACCAGCAGAGCCGAAAGCT > CP006584/1459603‑1460189 | ggCCATGAAAACATTGCTCGGCGAGAGGATTATGGATCGCATGACCATGAACGGCGGGCGATGGGTGAATTTTAACTGGGAGAGCTGGCGTCCGAATGTCGTCCAGCCAGGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCg < 1:203512/298‑1 (MQ=255) aCATTGCTCGGCGAGAGGATTATGGATCGCATGACCATGAACGGCGGGCGATGGGTGAATTTTCACTGGGAGAGCTGGCGTCCGACTGTCGTCCAGCCAGGAATTTCGAAGTAATTTTTACCGGGAGCACAATTTAATGGCGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCACAGAAGATGCTGCGCGACTTGAAATCAGCCACGAAGAAGTCGTGAAGGCACTATGGGCACTGCAAAAGCCTGGTTTCGTTGATAAACGCGCGGA‑CAGTTGGCGGTTGGCTGag > 2:72250/1‑297 (MQ=255) tCGGCGAGAGGATTATGGATCGCATGACCATGAACGGCGGGCGATGGGTGAATTTTAACTGGGAGAGCTGGCGTCCGAATGTCGTCCAGCCAGGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACg > 1:67709/1‑298 (MQ=255) aTTATGGATCGCATGACCATGAACGGCGGGCGATGGGTGAATTTTAACTGGGAGAGCTGGCGTCCGAATGTCGTCCAGCCAGGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGaa < 1:187708/298‑1 (MQ=255) aCCATGAACGGCGGGCGATGGGTGAATTTTAACTGGGAGAGCTGGCGTCCGAATGTCGTCCAGCCAGGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGACCGCACCGGCa > 2:263208/1‑298 (MQ=255) aCTGGGGGGGCTGGCGTCCGAATGTGGGCCAGGCAGGAAGTGGGAAGGAATTTTTACCGGGAGAAAAATTTAAGTGGGACTGTGTTTGGCGGAAGGAAAGCAATGGGAAAAGCAACATCCATAGAACTTGCTGCGCGGCTTGATAGCAGCCGTGAAGAGGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAg < 2:194161/298‑1 (MQ=255) tCCGAATGTCGTCCAGCCAGGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGACGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAACAGGACAAGCCACCTCCGGCAAGACTGCCGGAAAAAAATACCACGGCAACAGTCGCCAAAACATCagt > 2:118/1‑297 (MQ=255) gtcgtcCAGCCAGGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTG‑TTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACAACCACGGCAACAAGCGCGAAAATTTCCGAGAGcagtt > 2:238395/1‑294 (MQ=255) gccagGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGc < 1:425370/298‑1 (MQ=255) aTTGCGAAGTAATTTTTACCGGGAGAAAAATTTACTGGAGACTGTTTTTGACGCACTGAAAGCACTGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCAGTGAAGAAGTCATGAACGAACTCTGGGAACTGCAAAAGGCTGGTTTCGTTGATAAAAGAGCGTA‑CACCTGGCGTGTGGCTGATCACCACGTTCAGAAGGAACAGCCAGCGCCGTCAGCACTGACGGAAGAAACTACCACGGCAACAGCCGCGCAAATTCCAGCGAGCGATTCAACTTcaacgaat > 2:280924/1‑296 (MQ=255) gCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTca < 2:181484/204‑1 (MQ=255) gCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTca > 1:181484/1‑204 (MQ=255) tAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGt < 1:263208/298‑1 (MQ=255) ccGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTa > 1:417194/1‑298 (MQ=255) gggAGAAAAATTTAATGGAGACTGTGGTTGAGCCACGGAAAGCAATTGGAAAAGCCACAACCATAGAACTGGCTTCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CGTTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACAGCGACGATTGAACAACGTGGTCCACTAAc < 2:132951/298‑1 (MQ=255) ggAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACt < 1:226384/298‑1 (MQ=255) aaTTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCAAGGCAAGAATCGCGAAAATTTCAGAGAGCGATTTCACTGCGACGAATGAACAACGGGGTACAATAACTG‑GGGagg > 2:18332/1‑296 (MQ=255) cTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACgtt < 1:18332/298‑1 (MQ=255) aCGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTAc > 1:287522/1‑298 (MQ=255) cGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTAAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGACGAAACTACCACGGCAACAGTCGAGACAATTTCAGCAAGCAGTTTCACTGCGACGATTCAACAACGTGGTCCACTCACCG‑CGGATTAACTGGCTACgttgtcacgaacc > 2:39720/1‑290 (MQ=255) cACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACcac > 1:422375/1‑298 (MQ=255) aCTGAAATGAATGTGAAAAGCCAAATCCATGGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGTGGAACGGACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGGA‑CACTGGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACcaca < 2:67709/298‑1 (MQ=255) cTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGTAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACAt < 1:53460/298‑1 (MQ=255) tAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCTTCAACGCtggcaat < 1:118/298‑1 (MQ=255) gAACTTGCTGCGCGACTCGATATCAGCCGTGAAGAAGTGCTGAACGACCGATGGGAACTGGAACAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTCGCGTGTGGCTGATAACCACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGACGAAACTCCCACGGCAACAGCCGCCAAAATCTCAGCGGGCGATTTAACTGCGCGGATTGAACAACGTGGTCAACT‑ACTGTAGGATGAATTGCCTACGTTGACAGGTAACCGATCACGCCACGTGACTTCaatcccggtatggg > 2:429506/1‑286 (MQ=255) aCTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCaa > 2:255099/1‑158 (MQ=255) aCTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCaa < 1:255099/158‑1 (MQ=255) atacCAGCAGGGAAAAAGGGCTGAACAGACATTGGGAACTGAAAATGGCTGGTTTCGTTGATAAAAGGTCGTA‑CACTTGGCGTGTGTCGGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGCTCGTCt < 2:287522/298‑1 (MQ=255) cGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGCTCGTCTGATTcgcg < 1:72250/298‑1 (MQ=255) tGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACAACATCCCGCCAAGTGGCTTCAACGCCGGCAATGGCAAAGCCCAAAGCTCGACCGGTTCGCGtt > 2:19246/1‑298 (MQ=255) tGAACGAACTATGGAAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGCTCGTCTGATTCGCATTAATCAGAACgg < 1:286854/298‑1 (MQ=255) acTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGCTCGTCTGATTCGCGTTAATCAGAACGGTAAAttt > 1:103/1‑298 (MQ=255) cTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGCTCGTCTGATTCGCGTTAATCAGAACGGTAAATTTc < 1:420166/298‑1 (MQ=255) aaCGGAAAATGGCTGGGTTCGTTG‑TAAAACGGTGGACCACTTGGCGTGGGGGTTCTAACGACGGTCAGTAGGGACAGCCAGCGCCGGCAGAACTGCCGGAAGACAAGACCCAGGCAACAGTCTCGCAAATTTCAGGGAGCGATTTAACTGCGACGATTGAACAACGTGGTGCACTAACGG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCGTCAACGCTGGCAATGGCAATCAGCAAAGCTCGTCTGATTCGCGTTAATCAGAACGGTAAATTTCGTTACTg < 2:411827/298‑1 (MQ=255) ggCTGGTTTCGTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGCTCGTCTGATTCGCGTTAATCAGAACGGTAAATTTCGTTACTGCATGCCGGGc > 1:217101/1‑298 (MQ=255) gTTGATAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCACAGTGGCTTCAACGCTGGCACTTGCAATCAGCAAAGCCCGCCTGATTCCACTTAATCAGAACGGTAAATTTCGTTACTGACTTCCGTGCCGTAATTTAc > 2:411242/1‑298 (MQ=255) aTAAAAGCGCGTA‑CACTTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGACACTACCACGGCAACAGACGCGAACATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTGGTTCGGAACACCATCCCGCAAAGGGGCATCAACGCTGGCAGCGACAACGCGCACCGCTCGTCCAATTCGCGTTAATACGAACGATAACTAGTGTTACTGCATGCCGGGCGGTCAATTAcaaag > 2:22973/1‑294 (MQ=255) cacTTGGCGGGTGGCGGAGAAAGACGTTCAGCAGGAACAGCCAGGGCCGGCAGAACTGCCGGAAGAAACTGCCACGGAAACAGGCGCGAAAATTTCAGAGAGCTATTTAACTGCGACGATTGAACAACGGGGTCCACTAACGG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGCTCGTCTGATTCGCGTTAATCAGAACGGTAAATTTCGTTACTGCATGCCGGGCGGTAATTTACCAGCAGAGCCGAAAGCt < 2:422375/298‑1 (MQ=255) | GGCCATGAAAACATTGCTCGGCGAGAGGATTATGGATCGCATGACCATGAACGGCGGGCGATGGGTGAATTTTAACTGGGAGAGCTGGCGTCCGAATGTCGTCCAGCCAGGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGCCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTCGTTGATAAAAGCGCGTA‑CACCTGGCGTGTGGCTGATAACAACGTTCAGCAGGAACAGCCAGCGCCGGCAGAACTGCCGGAAGAAACTACCACGGCAACAGTCGCGAAAATTTCAGAGAGCGATTTAACTGCGACGATTGAACAACGTGGTCCACTAACTG‑CGGATGAACTGGCTACGTTGTTCGGTACCACATCCCGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGCTCGTCTGATTCGCGTTAATCAGAACGGTAAATTTCGTTACTGCATGCCGGGCGGTAATTTACCAGCAGAGCCGAAAGCT > CP006584/1459603‑1460189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |