| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006584 | 230,529 | T→C | D275G (GAC→GGC) | LY180_01015 ← | LysR family transcripitonal regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006584 | 230,529 | 0 | T | C | 97.1% | 115.1 / NA | 35 | D275G (GAC→GGC) | LY180_01015 | LysR family transcripitonal regulator |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (18/16); minor base A (0/1); total (18/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
CACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGTCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAAT > CP006584/230248‑230802 | cacaAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGc < 1:137079/298‑1 (MQ=255) caggTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCAc < 1:180412/295‑1 (MQ=255) aaGTGATGCTTGAGTGTGCTATGGGTGAAGGTTATGCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCGTAAGGCACAAAATTTACAGCTCGAGGCCAAAGATAAAAAAGGGATCG‑CCGCCCGGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGGCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACt < 2:100291/298‑1 (MQ=255) taaggggtAAGGTTACTCAGTAATTCCTTCTAATCCTAAACGTAAAAACCTGGAAAGAAATTTTAAGGCACAAAAGTGACAGCTCGATGCCAAAGATAAAAAAGCGGTCG‑CCGCCCTGGCTTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGc < 2:405179/295‑1 (MQ=255) gtgAAGGTTATGCAGTATTTCCTTGTTCTAATAACAATAAAAACCTGGAAAGTAATCTTAAGGACCAAAATTTCAGGCCCGAGGCCAAAGAGAAAAAGGCGATGG‑CCGCCGTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAacac < 2:118345/296‑1 (MQ=255) aCTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGc > 1:221304/1‑298 (MQ=255) ttCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTc < 1:404105/298‑1 (MQ=255) ctaAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTcc < 1:326206/298‑1 (MQ=255) gaagccTGGAAAGTAAGCTTAAGGCCAAAACGTTCCAGCTGGAGGCCAAAGAGAAAAAAGCGATCG‑CCGCCCGGGATGGCAACGACCGCCGGGTTGGCCCGAAAGGGCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGAt < 2:13590/294‑1 (MQ=255) ccTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCt > 2:300009/1‑298 (MQ=255) gTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAATCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGCGCTGCTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTCATAGCCTGCACTGACTGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCCCCAATTCTCCGCAAGCGACTCCTTTGTCGac > 2:54888/1‑297 (MQ=255) aaGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGAGGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCCCCGCGAGCGCTTTCTTTCTCGACCATGTAGt > 2:82270/1‑298 (MQ=255) aaaaTTTACAGCTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACaa > 1:71981/1‑298 (MQ=255) cTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATcc > 1:286036/1‑298 (MQ=255) gATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGt > 1:88256/1‑298 (MQ=255) aaGATAAAAGAGCGCACGTCCGCCC‑GGATTGCTACGACCGCCGGGTGAGCCCTGTAGGTCTGGTTCCGGAAGGGTATTACGCCCCTATTACAGCGCTCCCGGTAGCTGTATTTCACTGCCCGCTAAGGAAATCGCTAAAAGTCCGGATGCGCGGACCTACCGCACGGACGCTGTAATAGGCTGCACTGAATGGCGTTGCCACTGGCAACTCTTTCTCTGCCATTAACGACCGTAATTCGCCGCCAGCGATTTCTTGGTCGAGCATGTAGTCGGACAAACACGCAATCCCGTTGCCACt < 2:346717/298‑1 (MQ=255) aaGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGCCCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCGCGCTGACAGCTCCTCCGGGAGCTGTTTTTACATTCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACCGCCGCTGTAATAGACTGCCCTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTACCCCCACCAATTCCCCGCAAGCAATCTCGTTGTCGATCCTGTAGTCGTACAAACACGCAACCCAGTTGccccc > 2:424028/1‑295 (MQ=255) gATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCa > 1:240820/1‑298 (MQ=255) aaCGACCGCCGGGTGAGCCAGAAGGGTCTGCATCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGGGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGAGGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTAt < 2:221304/298‑1 (MQ=255) aCCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGa < 1:26756/298‑1 (MQ=255) cGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATg < 1:165484/298‑1 (MQ=255) cgggttCCTGAATGGGATTAGGCCTCGCTCACAGCTCCGCCGGGCGCGTTTTTTAGATGGCCGCTAAGGAAATCGATACAGGCCCGGAGGCGCGTACTTACCGCACGGCCGCTGAAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCAt < 2:160743/293‑1 (MQ=255) cTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACAC‑TTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGt > 1:232888/1‑298 (MQ=255) gAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTc > 1:426062/1‑298 (MQ=255) tGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAACTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCAATGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCAt > 1:213390/1‑298 (MQ=255) ttAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTa > 1:398376/1‑298 (MQ=255) tGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTTGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCgg > 1:58184/1‑298 (MQ=255) aCAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGcc < 1:300009/298‑1 (MQ=255) aGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCCTATAGTGGGACACACACGCAATACCGTTGCCAGTCAGGCAAAGCTGCTTCACATTTTCCCCACCATTGGGTGCCAAACCGTACTTCACCTCAACTAATTGTCCATCACTATAGGCGCTCGCCCAg > 2:384437/1‑298 (MQ=255) ctcctcCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATCCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGt < 1:382539/298‑1 (MQ=255) tccgccGGGATCTGTTTTTACAAGCTCGCTAAGGAAATCGATCAAAGCCCGGATGCTCGTACTAACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACGTTATCTGCCATTAACTCCACCAATTCGCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTa < 1:348462/298‑1 (MQ=255) tggtgtcTGTTTTTTCCTTCACTCTAAGGAAATCGACAAAATCCCGCATGCGCGTGCTTGCCGTGCGGCGGCGGTAATAGGCTGCACTGAATTGCATTGCCACTGGCAACACTTTAGCTGCCATTAACTCCACCAAGTCTCCGCGGGCGATTTCTTTGTCGATAATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCGACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAg < 2:184926/292‑1 (MQ=255) gggAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAgg > 1:208905/1‑298 (MQ=255) aGCCCGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCCGGCAAAGCTTTTTCAGTGTTTCCCCACTCTTGGATGACAAACCGTAATTCCCCCCATGTAATTGTCCATCACTACAGGCTATCGGCCCGGTAATAAGGGAAGAGGGTTCAGTGAAATCCAGGCAAACAATTTGCttt > 2:90182/1‑298 (MQ=255) cGGATGCGCGTACTTACCGCACGGCCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAAt > 1:85963/1‑298 (MQ=255) | CACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTCGATGCCAAAGATAAAAAAGCGATCG‑CCGCCCTGGATTGCAACGACCGCCTGGTTAGCCCGAAAGGTCTGGCTCCTGAATGGGATTAAGCCTCTCTGACAGCTCCTCCGGGAGCTGTTTTTACATGCTCGCTAAGGAAATCGATAAAAGCCCGGATGCGCGTACTTACCGCACGGTCGCTGTAATAGACTGCACTGAATGGCATTGCCACTGGCAACACTTTATCTGCCATTAACTCCACCAATTCTCCGCGAGCGATTTCTTTGTCGATCATGTAGTCGGACAAACACGCAATCCCGTTGCCACTCAGGCAAAGCTGTTTCAGTGTTTCCCCACTATTGGATGACAAACCGTACTTCACCTCATGTAATTGTCCATCACTACAGGCTATCGGCCAGGTATTGAGGGAAGCGGGTTCAGTGAATCCCAGGCAAACATGTTGCTTTAAAT > CP006584/230248‑230802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |