Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006584	2,312,761	T→A	intergenic (‑71/+448)	LY180_11070 ← / ← LY180_11075	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006584	2,312,761	0	T	A	100.0%	88.3 / NA	36	intergenic (‑71/+448)	LY180_11070/LY180_11075	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (19/17);  total (19/17)

CTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTTTGTTGAGTCGCCATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTTCTGCGATCTACTT  >  CP006584/2312481‑2313027                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                           cTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAAGATATTCAACCAACTAATATAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTCCGGCAATGAGCACGGTTAACTTTTATGTCAGCGTGTCCATCCCCCCTCCATACTAAGGAGTGCAACACCAGCACCTTCCCCTTACCCTTCCCCTCCACACTGTTTTACGTattttggaaccacacgct                                                                                                                                                                                                                                                           >  2:237032/1‑286 (MQ=17)         gTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCg                                                                                                                                                                                                                                                   >  1:414443/1‑298 (MQ=255)             tAGTAATTTTTAATCGAGAACTACAGAATATATTCAACCAACGAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTGTCCCCCTTAGTTGCGTTTCAATTTGCCTATTACTTCAACACAACAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTGTTGTGTCAGCGTGTCCATACGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATc                                                                                                                                                                                                                                               <  2:283835/298‑1 (MQ=14)                              gAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCATTATTAAGGAGCGCAACACCAGCACCTTACCCTTCCACTGCCTGTCGATCCTGGTTTACGTATGTTGGACCACGCTTTTGCACTTCGGATCAGATCAATAACTTCGGc                                                                                                                                                                                                                              >  2:161931/1‑298 (MQ=14)                                   aCAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTTTCCATCCGCCCTCCTTATTAAGGACCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTCACTACTTTGGACCACCCTGGTTACCTCCGGCTCAGAGCACTACCCGCGGccccac                                                                                                                                                                                                                         >  2:7188/1‑298 (MQ=14)                                     aGAATTAATTCAACCAACTAAAGGAATATTGATTTACTCAAGGAGGCATCGTTTTTCCCCCTAATTTCCGTTTCAATTTGCCTATTACTTAAACAAATCAATCAACCGGCACAGAGCCAC‑TAATCGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCAccc                                                                                                                                                                                                                       <  2:338911/298‑1 (MQ=11)                                       aaTATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCTGAGCACTACCTGCGGCACCACCCGt                                                                                                                                                                                                                     <  1:120659/298‑1 (MQ=255)                                          atatTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCg                                                                                                                                                                                                                  >  1:66840/1‑298 (MQ=255)                                              tCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAg                                                                                                                                                                                                              >  1:172400/1‑298 (MQ=255)                                                         aTAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGa                                                                                                                                                                                                   >  1:353779/1‑298 (MQ=255)                                                         aTAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGa                                                                                                                                                                                                   >  1:269723/1‑298 (MQ=255)                                                            gAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGACAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGAGTCAGCGTGTCCATCCGCTATCATTATTAAGGAGCGTAACACCAGCACCTTACCCTTACACGGCCCGTCGATACAGATTAACGTATGGTGGACCACGATGTTGCCCTCCGGAACAGACCACGACATGCTGCACCACCCGTACGGATGCCAGGAcattcaat                                                                                                                                                                                                >  2:208208/1‑291 (MQ=11)                                                                       tatttAAGGGGGTAGCTGTTTTCCCCCTTAGTTGCTTTTCAATTTGCCCATTACTTAAACAAATCAATCAACCGGAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATcc                                                                                                                                                                                     <  2:55083/298‑1 (MQ=11)                                                                                  gAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCg                                                                                                                                                                                         <  1:173083/283‑1 (MQ=12)                                                                                  gAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCg                                                                                                                                                                                         >  2:173083/1‑283 (MQ=12)                                                                                          tttCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGt                                                                                                                                                                  <  1:237032/298‑1 (MQ=255)                                                                                                  ttAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGGCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCGAACAGTCAggctaa                                                                                                                                                          >  1:348501/1‑294 (MQ=255)                                                                                                        gcatttCAACTTGCCCATTACATCAACAAGTCAATCTACGTTAACA‑AGGCACATAAGAGCCGCATTCGTGCAATAGTCACGGTTAACTTTTGTGTCAGCGTTTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGGACCTTACCCTGACCCTGCCTTTCGATTATGGGTTACGTATGTTGTACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCAAGGAATTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAAtc                                                                                                                                                    <  2:276103/295‑1 (MQ=11)                                                                                                                       cATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTg                                                                                                                                     >  1:338346/1‑298 (MQ=16)                                                                                                                            cTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGAATCAGAGCACTACCTGCGGCACCCCCCGTCCGTCAGCCAGGACTTGAAATGGGTTCACTCCGGCCCAACTTCCCAACCGCCCCGATTATAAATCTCCTTATCTTAATCTCAaca                                                                                                                                >  2:253317/1‑298 (MQ=11)                                                                                                                                             aCCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGATTAACTTTTGTGTCAGCGTGTCCATCCTCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTACCTGTCGATACTTGTTTACGTATGCTGGACCACGATGTTGCACTCCGGCTAAGAGCACTACCTGAGGCCCCCACCGTCCGGTACCCAGGACTTGAAATGGATTCGAGCCGGCGCACCTTCCCAACACTCACGCATATAACTATCATCTACTTATTTGCAACACTTTctctagatgtcta                                                                                                               >  2:224726/1‑286 (MQ=11)                                                                                                                                                    cAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCCGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGCTTATAAATCTCAtt                                                                                                                                               >  2:246957/1‑259 (MQ=255)                                                                                                                                                    cAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCAtt                                                                                                                                               <  1:246957/259‑1 (MQ=255)                                                                                                                                                    cAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAAttcg                                                                                                        >  1:202902/1‑298 (MQ=255)                                                                                                                                                    cAGAGCCAC‑AAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAAttcg                                                                                                        >  1:282936/1‑298 (MQ=255)                                                                                                                                                                              gCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGCCTTGAAATGGGTTCGATCCGGCGCCACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTAGTTCGTTGAGTTGCCCTGTTGCACTa                                                                               >  2:412475/1‑298 (MQ=14)                                                                                                                                                                                aaTGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATc                                                                             <  1:157664/298‑1 (MQ=255)                                                                                                                                                                                   gtgCACGGTTAACGTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTAACCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCTGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACCCTGTCCAGAGGTGGTTATCATTCGTTCGTTGAGATGCCATGTTGCACTATCAGt                                                                          <  1:336192/296‑1 (MQ=14)                                                                                                                                                                                         gtttAACTCTTGGTTCAGCGTGTCCATCCGCTCTCCTTATTAAAGAGCGCAACACCATCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTa                                                                    <  2:202902/296‑1 (MQ=17)                                                                                                                                                                                                  ttGTGTTAGCGGGTCCACCCCCTCTCCTTATGAAGGAGCGCAACACCAGCACCTTGCCCTTACCCTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGGTGTTGCACTCCGTATCAGAGCACTACCTGCGGGACCCCCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATACGGCGCACCTGCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAag                                                           <  2:101827/298‑1 (MQ=17)                                                                                                                                                                                                      ggacgCGTGGCCATCCTCTCTCATGATTACGGAACGCAACACCAGCATCGTACCCGTCCACCGTCTGTCGCTAGGGGTTTACGTATGATCGGCCACGATGTTGCACGTCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAagtagt                                                       <  2:66840/294‑1 (MQ=255)                                                                                                                                                                                                              gtCCATCCGCTCTCCTTATTAAGGAGCCCAACCCCAGAGCCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATaaaa                                               <  2:172400/298‑1 (MQ=18)                                                                                                                                                                                                                 cATCCCCTCTCCTTATTAAGGAGGGCAAAACCAGCCCCTTACCCGTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGaa                                            <  2:353779/298‑1 (MQ=18)                                                                                                                                                                                                                                   aGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCACAGGTCGTTCTAATTCGTTCGTTGAGATGCCATGTTGCACTCTCAGTAATTTAACATCAAATTCGTAATCAACAGAACCTGCCTAACCAGCAGGt                          >  2:393030/1‑298 (MQ=17)                                                                                                                                                                                                                                          cAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTa                   <  1:409794/298‑1 (MQ=255)                                                                                                                                                                                                                                                 aGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTTCTg            <  1:161931/298‑1 (MQ=255)                                                                                                                                                                                                                                                           ccttacACTGCCTGTCGATACTGGTTTACGTATGTTGGACCACGATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTTCTGCGATCTACtt  >  1:411873/1‑298 (MQ=255)                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                           CTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAACTAATAGAATATTAGTTTATTAAAGGGGGAAGCGGTTTTCCCCCTTAGTTGCGTTTCAATTTGCCCATTACTTCAACAAATCAATCAACCGTAACAGAGCCAC‑TAATAGCTCCAGTACGGCAATGAGCACGGTTAACTTTTGTGTCAGCGTGTCCATCCGCTCTCCTTATTAAGGAGCGCAACACCAGCACCTTACCCTTACACTGCCTGTCGATACTGGTTTACGTTTGTTGAGTCGCCATGTTGCACTCCGGATCAGAGCACTACCTGCGGCACCACCCGTCCGGTAGCCAGGACTTGAAATGGGTTCGATCCGGCGCAACTTCCCAACAGTCAGGATTATAAATCTCATTATCTTAATTGCAACACTGTCCAGAGGTGGTTATAATTCGTTCGTTGAGATGCCATGTTGCACTATCAGTAACTTAACATCAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTTCTGCGATCTACTT  >  CP006584/2312481‑2313027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑