| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006584 | 3,010,362 | G→T | E48* (GAA→TAA) | LY180_14330 → | type VI secretion protein ImpK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006584 | 3,010,362 | 0 | G | T | 95.1% | 128.7 / NA | 41 | E48* (GAA→TAA) | LY180_14330 | type VI secretion protein ImpK |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (21/18); total (22/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGCGGCGCTGCCGCTGCGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCGAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCAGGATCCGGTGGCC > CP006584/3010067‑3010655 | cggcggCGCTGCCGCTGCGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTaa > 1:129125/1‑298 (MQ=255) gcggcgCTGCCGCTGCGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACg > 1:257063/1‑298 (MQ=255) ccgctgcGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGa > 1:301229/1‑298 (MQ=255) ggctgcGACTGGAGAACCAGTAGTTTGGGCTGGATATGCACGGTGACGCGGCTAAAGCGGTGCTGGAGTCCGGGTGCTGCATGGTTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGGATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGAt < 2:194283/297‑1 (MQ=255) tGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGGCACGGTATGGAGCTGGATCGTCCCCGCCAGCGGCCGGTGGAACTGGTCCGCGAACGCCTGAAAgcacccggggtt > 2:120510/1‑287 (MQ=255) ggAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTa < 1:120510/298‑1 (MQ=255) aaCCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGGCAGGGAACCACCGTGCGTCACGGGATGGAGCTGTATCGTAACTGCCAGCGGCAGGGGGAACAGGTCCGCTAACGCCTGAAAGATGCCGGGTTCAGCCg > 1:21972/1‑298 (MQ=255) aCCAGGATATTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGGGTCCGGGTGATGGATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGCAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCTGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCgg < 1:256195/298‑1 (MQ=255) cAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGga > 1:296483/1‑298 (MQ=255) gcTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGc > 1:100350/1‑298 (MQ=255) gATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGAGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCAAAt > 1:26956/1‑298 (MQ=255) acaGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGGGGGGGAACTGCGTCAGGGAACCACCGTTCGTCCCGGTATGGAGCTGGATCCTCACTGCCAGCGGCAGGTGGAACTGGTCCCCTAACCCCTGACAGCTGCCGGGGTTCGCCGGGAGAGCGCGGGGCACATTCCCCAc > 2:240157/1‑298 (MQ=255) tGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGAc < 1:173557/298‑1 (MQ=255) tGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCCACATCGCCGCGCTCCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCCGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGCACTGGTCCGCTAACCCCTGCAAGATCCAGGGCTTAGCCGGGAACGCGTGGAGCACCATACCGACGCACAGTGCACCGTTCCGGACCaa > 2:374546/1‑298 (MQ=255) ggggTGCTGAAGCAGTTAGGGGCCAGGAACCATGGGGGACCGGAAACGTGAACTGTTTGGGGGGCGGCGCGCAGGAGAAAAGAGACGGAGATAAAGAGCGACGGGCGGCTGGTCGACACGTTTCTGACGGTGGTGGAGCGGCGTCAGGGAACCACCGTGCGTCACGGTATGGGGCTGTATCGGCACGGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTcc < 2:421983/297‑1 (MQ=255) gaggttgtagcgtgtttATCCGCCAGGACGCATGGGCGGGCTAAAACCGGATCTGTTGGGGGGGCTGCGCGCATGAAAAAAGAGAAGGATATCAAGATCGACGCGCTGCTGCGCGCAACGTTTCTGGCGGTGGTTGGACGGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTcc < 2:100350/284‑1 (MQ=255) gggTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCt > 1:26683/1‑298 (MQ=255) tttATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGACCATTACCTACCCGCAGTGCTCCCTGCTGGGCGAAACAGTcccgcgcaccaggggt > 2:102486/1‑284 (MQ=255) ggAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACgg > 1:387176/1‑298 (MQ=255) gAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGAATGGACGACGGt > 1:154839/1‑298 (MQ=255) aaCCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGTTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTCGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTc < 1:150728/298‑1 (MQ=255) cATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAgg > 1:315267/1‑298 (MQ=255) aTGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGc > 1:192935/1‑298 (MQ=255) gCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATc < 1:102486/298‑1 (MQ=255) gACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTg < 1:205556/298‑1 (MQ=255) ggttggggggttgcGGGCATGAAAAGAGAGAGGGATGTCAATGTGGGCGCGGTGCTGCGGGGCAGGTTTCTGACGGTGGGGGGACTGCGTCAGGGAACCACCGGGCGTCACGGTATGGAGCTGTAGCGTCACTGCCGGCGGCAGGTGGAACTGGTGCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTcc < 2:296483/287‑1 (MQ=255) aaaaGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTTGCATTTCTTCAACACCCTg < 1:240157/298‑1 (MQ=255) aaGGGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTgca < 1:356661/298‑1 (MQ=255) agagACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTgcag > 1:424490/1‑298 (MQ=255) aaTATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCAACTTACCCACGCGCAGTGCGCCCCGCGGGACCAAACAGTCCTGAGTCGCAGGCGCCTGGACCAAGGTCAGGCCACCTGGCTGACGGAACAACCCACGCCGCCCTTCTTCCCCACCCTCCcggccggccgcccgc > 2:809/1‑291 (MQ=255) gACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCct > 1:369061/1‑167 (MQ=255) gACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCct < 2:369061/167‑1 (MQ=255) acGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGgtgt < 1:153457/298‑1 (MQ=255) ggtggtGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGccc < 1:374546/298‑1 (MQ=255) aaCTGCGGCAGGTAACCACCGTGCGTCACGGTATGGAGCTGTATTGTCACTGCCAGCGGCAGGCGGAACTGGTCCGCTAACGCTGGATAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCATGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCTCGCCTGc < 1:72789/298‑1 (MQ=255) aCTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACCTTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCGTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGAATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGca > 1:186222/1‑298 (MQ=255) gAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCctgc < 1:399481/298‑1 (MQ=255) tgtCGTCACTGGCGCGGGAAGGTGGGACTGGTCGGCTAACGCCTGAAAGGTGCCGGGTTTAGCCGGGGGGGCGTGGGTCACATTACCTACGCGCAGGGCGCCCGGCTGGGCGAAACAGTCCTGAGGCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTgg < 2:192935/296‑1 (MQ=255) ggAACTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCAGGAt > 1:426867/1‑298 (MQ=255) aaCTGGTCCGCTAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTGTCAGGATcc > 1:128339/1‑298 (MQ=255) gggTCCGCGAACGCCGGAATGATGCCGGGTTTGGCCGGGAGGGCGTGGAGAACATTGCCTCGGCGCAGTGCGCCCTGCTGGACGAAACGGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCAGGATCCGGt < 2:424490/297‑1 (MQ=255) gggcgAATGCGGGAAAGGAGCCGGGTTGAGCCGGGAGAGCGTGGAGCACCATACCTACGCGCAGTGAGCGCCGCTGGAGGAGACAGGCGTGAGTCGCAGGGGCATGTACGACGGTCAGGCCATCTGGATGAAGGAGCCACTGCAGTCGCATTTCTTCAGCGCCCTGCAGGCGGGCGAGCTGCGGTACGAGCGGATGAAGCAGGTGTTGCGGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCGGCTGGGAGTTCGCGGGCGTTATCAGGATCCGGTGGcc < 2:360903/296‑1 (MQ=255) | CGGCGGCGCTGCCGCTGCGACTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGTGCTGCATGATTTATGCGCCAGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCGCATGAAAAAAGAGACGGATATCAATATCGACGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACCGTGCGTCACGGTATGGAGCTGTATCGTCACTGCCAGCGGCAGGTGGAACTGGTCCGCGAACGCCTGAAAGATGCCGGGTTTAGCCGGGAGAGCGTGGAGCACATTACCTACGCGCAGTGCGCCCTGCTGGACGAAACAGTCCTGAGTCGCAGCGGCATGGACGACGGTCAGGCCATCTGGATGAAGGATCCACTCCAGTCGCATTTCTTCAACACCCTGCAGGCAGGCGAGCTGCTGTACGAGCGGATGAAGCAGGTGTTGCAGGAGCCCGCGCCTGCACAGGCTGTGCTGACCTGCTTTCACCGTGTCCTGCTGCTGGGATTTCGCGGGCGTTATCAGGATCCGGTGGCC > CP006584/3010067‑3010655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |