| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006584 | = 2891935 | NA (NA) | 74 (1.210) | 68/584 | 0.1 | 98.7% | intergenic (+12/+249) | LY180_13750/LY180_13755 | hypothetical protein/transcriptional regulator |
| ? | CP006584 | = 3268631 | 1 (0.020) | coding (88/1119 nt) | LY180_15515 | hydrogenase 2 small subunit | |||||
GAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGTTTTC > CP006584/2891646‑2892227 | gAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGAGGCATTCTGGCTACACACTAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACTCTTTGGGGAAATTAGGCGGGGATATCTCGATGCACAg > 2:23506/1‑298 (MQ=9) gcagcTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGTATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGa > 1:218086/1‑298 (MQ=18) tCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTc < 1:318869/298‑1 (MQ=34) cAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTcc < 1:184550/298‑1 (MQ=35) cAGAGCGGTTTGATATCATGCTGCGAATCGCCCTGAGGCTTCAACTAACAGGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGAATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTcc < 2:206265/298‑1 (MQ=255) atcGTTTTGATATCATGATGCTAATCGCCCTGATGCTTCAAATTACATGTTGGCGTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTATCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCtga < 2:561865/296‑1 (MQ=255) gATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAAc > 1:55129/1‑298 (MQ=39) tGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTa > 1:588978/1‑298 (MQ=255) aTGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACg < 1:571813/298‑1 (MQ=255) aaCTAACATGTTGGCTTGCGGGCGTTCATGCTCAGACACAAGATTGAGACAAGCACTGCCAGGCTAACTCAGTCAGAACTCGAATCGTACTCTCAACAGTTCGCGTAGGCATGGAGGTTTGCCGGCATTCTGGCTACACAATAACAATGGAAGACTGACCCGTGTCTGCAACCCAACTAGCTCAACAACTATTCCCACATGGTGCAGCGTCTGGCAAATTATGAGGGGCGTTACAAGGGCACCACCCTGCTTTTCCTGATGAGAAACCACGAACCCCACTAcacaagcatgcgaaccc > 2:256326/1‑285 (MQ=2) ccTAACAGTTGGGTTTGCTGGGATTAATGGTCACAAGCACGGTTGGACCAATCACTCCCAGGCTAACACTGTCAGAAATCGAAACGTAAGTTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCGGGCTACACAAGAACAAGGGAAGACTTGCTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGATGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCaa < 2:497522/297‑1 (MQ=17) aCTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGACATTATGAGGGGATCTCTCAGTTCACAGTCCTGATTTTCCTGCGAAGAAAACACGCACCCAACTTGCCAGGTCAGGCAACaaa > 2:128872/1‑298 (MQ=14) aaCATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATAc < 1:573852/298‑1 (MQ=255) tgttgtCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCGAACACAGTCAGAAAGCGAAACGTACTCTCAACATTTCGCGTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTGATTCACACATGATTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACAttt < 1:585324/298‑1 (MQ=255) tgcgttGCCGGCGTTCATGGTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCGAACACAGTCAGAAATCGAAACGTACTCTCAAAAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTTGCTAGACAATAACAAGGGAAGACTTACTCGTGGCTGCAAACCTACTAGCTCAAAATTTATTCAAACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACt < 2:651898/294‑1 (MQ=255) cTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTcgc < 1:18416/298‑1 (MQ=255) ttCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCGCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAatg < 1:569711/298‑1 (MQ=255) tCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAatga < 1:269099/298‑1 (MQ=255) tGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAAtgatga > 1:206586/1‑298 (MQ=255) cACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCTCGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCaa < 1:29349/298‑1 (MQ=255) cTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATg > 1:320615/1‑298 (MQ=255) ctCCAGGCTAACACAGTCAAAAATCGAAACGTTCTCTTAAACGTTCTCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATGTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGa < 2:55129/297‑1 (MQ=255) cAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAg < 1:385479/298‑1 (MQ=255) ggCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGtt < 1:548954/298‑1 (MQ=255) tAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAAt < 1:23506/298‑1 (MQ=255) aaCACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATg > 1:301082/1‑298 (MQ=255) aGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTAc < 1:287543/234‑1 (MQ=255) aGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTAc > 2:287543/1‑234 (MQ=255) aGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATAc < 1:458693/298‑1 (MQ=255) tagAACCGTACTCGCACAAGTTCGCTTATGCAGGAAATTGTTGCGGCATTCTGGCTACACAATAACAAGGGAAGAATGTGTCTTGGCGGCAACCCAACTAGCGCAAAATTTATTCACACATGGTTACGCTTTGGGTAAATGATGAGGGGATATCGCAGTGAGCAGTCCTGATTGTCCTGATGAGAAACCACGCACGCCACTGCACAGGTACGGCAACCAATACCTTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGTTACATTca < 2:55754/296‑1 (MQ=25) gTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCGGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTa > 1:577364/1‑298 (MQ=255) tcgtgaggagtgaggTTTTGTCGCTTTCTGGGTATAGAAGAACAATGGAAGGCTTACTCGTGGCTGCGTCCGTAGTAGGGCTAGATGTGTTCACAGATGGTTACGCAGTGGGGAAATTAGGAGGGGCTCTCTATGGTCAACGCGCTGATTTTCCGTATGAGAAACCACGCACGGCACTTCACAGGTACGGCAACCAATACATTGACTCGCGTAAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACATATCATGCCAGTTTTTAATTc < 2:369984/284‑1 (MQ=255) tGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGACACGGTTCATCAAATTATCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTACCTGTTCtt > 2:563898/1‑298 (MQ=255) ggaaTTCTGGCTAAACAATAACAAGGGAAGACTTCCTCGTGGCTGAAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCGTATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAaattaa < 2:206586/295‑1 (MQ=255) cATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTAAGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACCGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCAATGTTATTTAAGGAaattaatt > 2:523295/1‑298 (MQ=255) ttCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTc > 1:583149/1‑298 (MQ=255) acacAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGc > 1:206100/1‑298 (MQ=255) aaacaAAAAAAAAGGATGACGTACTCGGGGCTGCACCCCTAATAGCTCCAAGTTGTTTCAAACATGGTTACGCGTTGAGGAAAGTATGAGGGGATCTCTCAGGTCACAGACCTGATGTTCCGTATGAGAAACCACGCACGCCAATTAACAGGTACTGCAACCAATACATTTACTCGCGTAAGGAATGATTAAACGGTTAATCAAATTCTCCAGCAATGACAGTTAATGCGCCTATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGc < 2:611491/296‑1 (MQ=255) caATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAgg > 1:189285/1‑298 (MQ=255) gggAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGAt < 1:595931/298‑1 (MQ=255) aGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCCGCAATGATGACACGGTTCATCAACTTCCCCAGCAATGACAGGTAATGCGCCGACACATTCACCAACCATTCCCATTTTTAATTCACTCTTACTCACGGAAATTAATTTCTGTAATGACGG‑AAAAAAGATTTCa > 2:48552/1‑298 (MQ=37) aCTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATc < 1:637682/298‑1 (MQ=255) aCCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCACGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCCACA‑CGAGTGACGATgc > 2:234573/1‑297 (MQ=255) ctaGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTACTTTATTTAAAGCAGGAAAAAAAGATGGAATTGAAA‑CTAGTAACGATGACAttt > 2:23719/1‑296 (MQ=39) aaTTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATg > 1:550558/1‑298 (MQ=255) aTTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGGTTTTAATTCAATGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CAAGTGACGATGCAATGTGATGACAAGGTTTAt > 2:90516/1‑298 (MQ=255) aCGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAAt > 1:186324/1‑298 (MQ=255) cGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAAtg < 1:208205/298‑1 (MQ=255) cTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATTGGATGACAATGTTTATCGCGAAAGCACAAtgag > 2:546083/1‑298 (MQ=255) cTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑ACAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAAtaag > 2:35813/1‑298 (MQ=255) ttGGGAAAATGAGGAGGGGATCTCTAAGTCCACAGTCCTGATTTTCCTGATGAGAAACCACGCCCACCAATTAACAGGTACGGCAACCAATACATTTACGCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATTCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAAtgagtg < 2:629081/298‑1 (MQ=255) gAAATTATGAGGTGATCCCTCAGTGAACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTcg < 1:256326/298‑1 (MQ=255) ggggATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCa > 1:278580/1‑298 (MQ=255) ggAACTCGCAGTGCACAGTCCTGATGTTCCTGAAGAACAACCACGCACGCCACTTCACCGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGATTCATCAACTCATCCAGCAATGACAGTTAATGCGCCGATACCATCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTACTTTCTGAAATGCAGG‑AAAACAGATGTAATC‑ACACCTAGTAACGATGAAATGTGATCACAGTGTCTATCGAGAAAGCACAATGAGTGAGTcgccaccggctcgc > 2:533585/1‑287 (MQ=255) aTCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGttt < 1:645525/298‑1 (MQ=255) aTCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGttt < 1:128872/298‑1 (MQ=255) atctaAGTGCCCAATCCTGATTTTCCGGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGACAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGTTTTc < 2:206100/297‑1 (MQ=255) | GAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGG‑AAAAAAGATGTCATCGACA‑CTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGTTTTC > CP006584/2891646‑2892227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |